chr	position	ref	alt	quality	samtools_GT_RAW	min_depth	1RF	1RR	1AF	1AR	2RF	2RR	2AF	2AR	3RF	3RR	3AF	3AR	4RF	4RR	4AF	4AR	5RF	5RR	5AF	5AR	6RF	6RR	6AF	6AR	7RF	7RR	7AF	7AR	8RF	8RR	8AF	8AR	merge_repeat	trfMask	chromOut	simple	nested	segmentDup
chr7	3173594	G	C	999	11 11 11 11 11 11 11 11	31	0	0	21	23	0	0	17	20	0	0	21	22	0	0	16	25	0	0	22	30	0	0	17	25	0	0	20	11	0	0	19	17	merge_repeat		chromOut		nested
chr7	3182854	T	C	999	11 11 11 11 11 11 11 11	36	0	0	28	22	0	0	19	37	0	0	24	30	0	0	16	32	0	0	25	33	0	0	19	29	0	0	26	37	0	0	19	17	merge_repeat		chromOut
chr7	3183221	G	T	999	11 11 11 11 11 11 11 11	23	0	0	22	8	0	0	17	6	0	0	17	13	0	0	22	8	0	0	21	7	0	0	22	12	0	0	14	12	0	0	29	7	merge_repeat			simple
chr7	3183223	A	T	999	11 11 11 11 11 11 11 11	23	0	0	22	8	0	0	17	6	0	0	17	13	0	0	22	8	0	0	21	7	0	0	22	12	0	0	14	12	0	0	29	7	merge_repeat			simple
chr7	3185136	A	G	999	11 11 11 11 11 11 11 11	34	0	0	14	26	0	0	20	31	0	0	17	37	0	0	15	42	0	0	17	31	0	0	14	20	0	0	23	25	0	0	17	26
chr7	3185156	C	T	999	11 11 11 11 11 11 11 11	31	0	0	16	23	0	0	23	28	0	0	18	30	0	0	21	34	0	0	19	33	0	0	14	17	0	0	25	22	0	0	18	25
chr7	3185160	A	G	999	11 11 11 11 11 11 11 11	30	0	0	17	23	0	0	23	27	0	0	18	30	0	0	20	34	0	0	19	32	0	0	13	17	0	0	25	21	0	0	17	27
chr7	3185186	A	C	999	11 11 11 11 11 11 11 11	31	0	0	18	19	0	0	25	29	0	0	20	26	0	0	28	31	0	0	20	32	0	0	15	16	0	0	27	26	0	0	20	30
chr7	3185189	C	G	999	11 11 11 11 11 11 11 11	31	0	0	19	19	0	0	25	28	0	0	20	26	0	0	29	30	0	0	21	32	0	0	15	16	0	0	27	26	0	0	20	30
chr7	3193226	G	T	999	11 11 11 11 11 11 11 11	36	0	0	18	25	0	0	27	18	0	0	21	15	0	0	32	30	0	0	21	17	0	0	25	23	0	0	34	18	0	0	20	17
chr7	3196763	C	A	999	11 11 11 11 11 11 11 11	34	0	0	15	19	0	0	18	18	0	0	26	30	0	0	24	23	0	0	17	22	0	0	16	20	0	0	17	23	0	0	12	24
chr7	3196814	A	G	999	11 11 11 11 11 11 11 11	32	0	0	11	21	0	0	16	27	0	0	22	40	0	0	21	34	0	0	19	22	0	0	20	20	0	0	18	24	0	0	12	23
chr7	3202189	C	A	999	11 11 11 11 11 11 11 11	25	0	0	12	16	0	0	21	16	0	0	21	22	0	0	18	22	0	0	14	22	0	0	13	22	0	0	17	15	0	0	14	11	merge_repeat			simple
chr7	3205395	T	C	999	11 11 11 11 11 11 11 11	22	0	0	12	13	0	0	9	23	0	0	5	20	0	0	7	15	0	0	12	23	0	0	15	16	0	0	8	18	0	0	11	22	merge_repeat		chromOut
chr7	3224079	T	C	999	11 11 11 11 11 11 11 11	26	0	0	24	20	0	0	25	17	0	0	23	10	0	0	18	16	0	0	28	9	0	0	23	18	0	0	26	17	0	0	12	14	merge_repeat		chromOut
chr7	3224158	A	C	999	11 11 11 11 11 11 11 11	41	0	0	34	26	0	0	35	28	0	0	33	32	0	0	26	15	0	0	39	22	0	0	35	26	0	0	34	15	0	0	23	21	merge_repeat		chromOut
chr7	3230655	G	T	999	11 11 11 11 11 11 11 11	42	0	0	23	26	0	0	31	38	0	0	14	38	0	0	17	31	0	0	21	41	0	0	24	18	0	0	22	23	0	0	30	35	merge_repeat				nested
chr7	3230789	T	A	999	11 11 11 11 11 11 11 11	48	0	0	23	25	0	0	22	37	0	0	19	32	0	0	28	46	0	0	20	43	0	0	18	31	0	0	22	37	0	0	19	32	merge_repeat		chromOut		nested
chr7	3277583	G	C	999	11 11 11 11 11 11 11 11	40	0	0	26	21	0	0	21	20	0	0	31	25	0	0	20	28	0	0	24	20	0	0	21	20	0	0	23	17	0	0	27	23
chr7	3278981	T	C	999	11 11 11 11 11 11 11 11	43	0	0	28	20	0	0	28	17	0	0	27	24	0	0	27	19	0	0	25	19	0	0	27	16	0	0	25	22	0	0	29	31	merge_repeat		chromOut
chr7	3278982	G	T	999	11 11 11 11 11 11 11 11	44	0	0	28	20	0	0	28	17	0	0	28	24	0	0	27	19	0	0	25	19	0	0	28	16	0	0	25	22	0	0	29	30	merge_repeat		chromOut
chr7	3278998	A	G	999	11 11 11 11 11 11 11 11	44	0	0	28	19	0	0	27	17	0	0	26	22	0	0	27	21	0	0	25	20	0	0	31	17	0	0	23	23	0	0	28	22	merge_repeat		chromOut
chr7	3278999	G	T	999	11 11 11 11 11 11 11 11	44	0	0	28	19	0	0	27	17	0	0	25	22	0	0	27	21	0	0	25	20	1	0	29	17	0	0	23	23	0	0	28	22	merge_repeat		chromOut
chr7	3279003	A	T	999	11 11 11 11 11 11 11 11	44	0	0	27	20	0	0	27	17	0	0	26	22	0	0	27	22	0	0	26	20	0	0	30	18	0	0	23	23	0	0	29	21	merge_repeat		chromOut
chr7	3279006	T	G	999	11 11 11 11 11 11 11 11	45	0	0	28	20	0	0	28	17	0	0	27	22	0	0	27	22	0	0	27	21	0	0	31	18	0	0	23	23	0	0	29	21	merge_repeat		chromOut
chr7	3279038	C	T	999	11 11 11 11 11 11 11 11	43	0	0	29	20	0	0	28	19	0	0	33	23	0	0	26	24	0	0	32	26	0	0	34	24	0	0	22	21	0	0	32	25	merge_repeat		chromOut
chr7	3293359	A	C	999	11 11 11 11 11 11 11 11	40	0	0	16	27	0	0	28	21	0	0	28	29	0	0	25	33	0	0	29	33	0	0	20	27	0	0	16	24	0	0	33	18
chr7	3293360	C	T	999	11 11 11 11 11 11 11 11	40	0	0	17	29	0	0	28	21	0	0	27	28	0	0	25	33	0	0	28	33	0	0	20	27	0	0	16	24	0	0	33	18
chr7	3293434	T	G	999	11 11 11 11 11 11 11 11	39	0	0	15	31	0	0	26	16	0	0	28	26	0	0	23	32	0	0	32	34	0	0	15	24	0	0	19	23	0	0	30	23
chr7	3293440	A	G	999	11 11 11 11 11 11 11 11	39	0	0	15	31	0	0	26	16	0	0	27	26	0	0	23	32	0	0	32	34	0	0	15	24	0	0	18	23	0	0	30	23
chr7	4006930	A	G	999	11 11 11 11 11 11 11 11	36	0	0	17	19	0	0	30	29	0	0	16	27	0	0	26	22	0	0	27	15	0	0	21	17	0	0	26	27	0	0	22	23
chr7	5125744	A	G	999	11 11 11 11 11 11 11 11	34	0	0	15	19	0	0	22	29	0	0	24	27	0	0	17	26	0	0	23	21	0	0	19	24	0	0	25	23	0	0	26	21	merge_repeat				nested
chr7	5621587	A	G	999	11 11 11 11 11 11 11 11	29	0	0	20	23	0	0	15	14	0	0	15	14	0	0	10	24	0	0	17	13	0	0	19	13	0	0	16	26	0	0	16	19	merge_repeat		chromOut		nested	segmentDup
chr7	6470346	C	A	999	11 11 11 11 11 11 11 11	46	0	0	26	28	0	0	35	27	0	0	33	30	0	0	30	28	0	0	25	33	0	0	21	34	0	0	25	21	0	0	29	35
chr7	6734746	A	C	999	11 11 11 11 11 11 11 11	27	0	0	11	19	0	0	10	29	0	0	11	22	0	0	10	27	0	0	6	30	0	0	11	17	0	0	9	24	0	0	6	21	merge_repeat		chromOut		nested
chr7	6801842	A	G	999	11 11 11 11 11 11 11 11	35	0	0	14	34	0	0	12	23	0	0	12	43	0	0	21	33	0	0	22	29	0	0	16	21	0	0	9	32	0	0	14	26	merge_repeat		chromOut
chr7	7251455	C	A	999	11 11 11 11 11 11 11 11	29	0	0	10	23	0	0	20	27	0	0	14	25	0	0	19	16	0	0	22	21	0	0	15	24	0	0	10	19	0	0	14	19	merge_repeat		chromOut		nested	segmentDup
chr7	10364895	C	A	999	11 11 11 11 11 11 11 11	39	0	0	35	30	0	0	34	29	0	0	33	30	0	0	22	24	0	0	37	31	0	0	22	17	0	0	33	27	0	0	33	37	merge_repeat		chromOut		nested
chr7	11987491	A	G	999	11 11 11 11 11 11 11 11	46	0	0	23	23	0	0	20	26	0	0	16	30	0	0	32	35	0	0	22	33	0	0	22	31	0	0	24	31	0	0	19	32
chr7	14626613	A	C	999	11 11 11 11 11 11 11 11	28	0	0	17	24	0	0	20	20	0	0	19	13	0	0	21	20	0	0	17	17	0	0	14	14	0	0	22	23	0	0	17	19	merge_repeat		chromOut		nested	segmentDup
chr7	15425414	T	C	999	11 11 11 11 11 11 11 11	59	0	0	35	35	0	0	36	36	0	0	31	28	0	0	30	34	0	0	25	38	0	0	33	47	0	0	42	29	0	1	41	30	merge_repeat					segmentDup
chr7	16292314	T	C	999	11 11 11 11 11 11 11 11	49	0	0	45	15	0	0	37	13	0	0	33	29	0	0	34	22	0	0	44	35	0	0	33	30	0	0	35	14	0	0	41	17
chr7	16682282	T	A	999	11 11 11 11 11 11 11 11	51	0	0	35	29	0	0	35	28	0	0	21	31	0	0	22	48	0	0	29	35	0	0	29	23	0	0	27	34	0	0	19	32	merge_repeat		chromOut		nested
chr7	18367265	A	T	999	11 11 11 11 11 11 11 11	31	0	0	25	22	0	0	21	12	0	0	33	15	0	0	25	11	0	0	30	17	0	0	28	14	0	0	26	9	0	0	17	14	merge_repeat	trfMask	chromOut	simple		segmentDup
chr7	18367267	A	T	999	11 11 11 11 11 11 11 11	32	0	0	25	23	0	0	21	13	0	0	33	21	0	0	25	13	0	0	30	19	0	0	29	18	0	0	26	10	0	0	17	15	merge_repeat	trfMask	chromOut	simple		segmentDup
chr7	19510120	T	C	999	11 11 11 11 11 11 11 11	24	0	0	8	16	1	0	13	18	0	0	18	13	0	0	10	18	0	0	12	23	0	0	10	23	0	0	12	23	1	0	10	13	merge_repeat		chromOut
chr7	19828853	A	G	999	11 11 11 11 11 11 11 11	25	0	0	13	25	0	0	13	23	0	0	19	16	0	0	19	16	0	0	13	18	0	0	17	17	0	0	16	12	0	0	10	15	merge_repeat		chromOut		nested
chr7	19828856	A	G	999	11 11 11 11 11 11 11 11	25	0	0	13	27	0	0	14	23	0	0	19	16	0	0	19	16	0	0	13	17	0	0	17	17	0	0	16	12	0	0	10	15	merge_repeat		chromOut		nested
chr7	20434001	G	A	232	11 11 11 11 11 11 11 11	24	1	0	14	20	0	0	13	11	1	0	22	22	0	0	24	22	0	0	25	24	0	0	16	23	0	0	17	23	1	0	15	19	merge_repeat		chromOut		nested	segmentDup
chr7	21328881	T	A	999	11 11 11 11 11 11 11 11	28	0	0	12	22	0	0	29	20	0	0	17	11	0	0	18	23	0	0	14	21	0	0	21	17	0	0	19	18	0	0	15	22	merge_repeat		chromOut			segmentDup
chr7	22429637	G	A	273	11 11 11 11 11 11 11 11	25	0	0	16	27	0	0	8	17	0	0	12	25	0	0	23	25	0	0	25	33	1	0	21	20	1	0	16	25	0	0	10	19	merge_repeat		chromOut		nested	segmentDup
chr7	22779398	T	C	999	11 11 11 11 11 11 11 11	77	0	0	49	51	0	0	49	41	0	0	49	43	0	0	48	37	0	0	40	37	0	0	48	30	0	0	51	29	0	0	37	43	merge_repeat		chromOut		nested	segmentDup
chr7	22796882	T	C	999	11 11 11 11 11 11 11 11	29	0	0	10	19	0	0	16	26	0	0	19	13	0	0	21	17	0	0	17	25	0	0	15	21	0	0	26	15	0	0	19	20	merge_repeat		chromOut		nested	segmentDup
chr7	22834935	A	G	999	11 11 11 11 11 11 11 11	34	0	0	29	24	0	0	23	19	0	0	26	20	0	0	24	28	1	0	27	18	0	0	23	11	0	0	26	17	0	0	19	16	merge_repeat		chromOut		nested	segmentDup
chr7	23155793	A	G	999	11 11 11 11 11 11 11 11	21	0	0	6	24	0	0	13	17	0	0	9	28	0	0	8	21	0	0	10	18	0	0	10	15	0	0	10	22	0	0	11	10	merge_repeat				nested	segmentDup
chr7	23155817	A	G	999	11 11 11 11 11 11 11 11	25	0	0	11	25	0	0	15	18	0	0	15	24	0	0	9	24	0	0	12	14	0	0	11	17	0	0	15	25	0	0	13	12	merge_repeat				nested	segmentDup
chr7	24652350	T	A	999	11 11 11 11 11 11 11 11	37	0	0	20	36	0	0	22	35	0	0	22	32	0	0	19	28	0	0	26	22	0	0	23	42	0	0	20	28	0	0	11	26	merge_repeat	trfMask	chromOut	simple	nested
chr7	24935700	T	G	999	11 11 11 11 11 11 11 11	20	0	0	14	17	0	0	12	12	0	0	24	11	0	0	23	13	0	0	24	17	0	0	16	16	0	0	20	12	0	0	14	6
chr7	24935702	G	T	999	11 11 11 11 11 11 11 11	20	0	0	15	16	0	0	12	13	0	0	24	10	0	0	23	13	0	0	24	15	0	0	16	15	0	0	20	13	0	0	14	6
chr7	25497163	A	C	999	11 11 11 11 11 11 11 11	43	0	0	20	31	0	0	17	26	0	0	30	33	0	0	29	23	0	0	32	36	0	0	34	26	0	0	36	24	0	0	24	21	merge_repeat		chromOut		nested	segmentDup
chr7	26784046	A	C	999	11 11 11 11 11 11 11 11	20	0	0	11	18	0	0	8	12	0	0	14	16	0	0	19	16	0	0	21	18	0	0	17	16	0	0	11	16	1	0	12	21	merge_repeat	trfMask	chromOut	simple
chr7	26784051	A	C	999	11 11 11 11 11 11 11 11	22	0	0	12	17	0	0	10	12	0	0	13	17	0	0	20	14	0	0	18	18	0	0	16	14	0	0	10	14	0	0	17	22	merge_repeat	trfMask	chromOut	simple
chr7	27169766	T	G	999	11 11 11 11 11 11 11 11	26	0	0	25	10	0	0	23	19	0	0	9	17	0	0	24	23	0	0	25	26	0	0	25	14	0	0	14	15	0	0	22	12	merge_repeat	trfMask	chromOut	simple
chr7	27695934	C	A	999	11 11 11 11 11 11 11 11	23	0	0	31	10	1	0	35	11	0	0	21	5	0	0	30	7	0	0	29	11	0	0	28	10	0	0	31	5	0	0	16	7	merge_repeat				nested
chr7	27700563	T	C	999	11 11 11 11 11 11 11 11	27	0	0	19	14	0	0	15	12	0	0	15	17	0	0	17	25	0	0	17	18	0	0	18	18	0	0	15	20	0	0	20	14	merge_repeat		chromOut
chr7	28416754	A	G	999	11 11 11 11 11 11 11 11	48	0	0	36	23	0	0	43	28	0	0	36	25	0	0	38	27	0	0	47	27	0	0	37	28	0	0	33	28	0	0	17	31
chr7	28566192	T	G	999	11 11 11 11 11 11 11 11	49	0	0	35	23	0	0	33	24	0	0	36	20	0	0	43	29	0	0	47	32	0	0	27	22	0	0	32	29	0	0	41	32
chr7	28566193	A	C	999	11 11 11 11 11 11 11 11	48	0	0	35	23	0	0	33	24	0	0	36	20	0	0	43	29	0	0	47	32	0	0	26	22	0	0	32	29	0	0	41	32
chr7	29967065	C	T	999	11 11 11 11 11 11 11 11	23	0	0	5	22	0	0	7	22	0	0	11	26	0	0	15	21	0	0	11	12	0	0	5	18	0	0	9	16	0	0	6	17	merge_repeat		chromOut		nested
chr7	31322849	G	T	999	11 11 11 11 11 11 11 11	44	0	0	31	21	0	0	21	23	0	0	25	27	0	0	18	32	0	0	32	25	0	0	22	35	0	0	28	23	0	0	24	30	merge_repeat		chromOut		nested
chr7	33680274	G	A	999	11 11 11 11 11 11 11 11	59	0	0	33	43	0	0	55	37	0	0	34	34	0	0	27	41	0	0	30	29	0	0	23	38	0	0	41	40	0	0	33	32	merge_repeat		chromOut		nested
chr7	34467178	T	C	999	11 11 11 11 11 11 11 11	28	0	0	13	20	0	0	17	15	0	0	21	17	0	0	16	12	0	0	23	19	0	0	19	14	0	0	20	17	0	0	21	18	merge_repeat		chromOut		nested
chr7	34467179	A	G	999	11 11 11 11 11 11 11 11	28	0	0	13	20	0	0	17	16	0	0	21	17	0	0	16	12	0	0	23	19	0	0	19	14	0	0	20	17	0	0	21	18	merge_repeat		chromOut		nested
chr7	35635097	C	A	999	11 11 11 11 11 11 11 11	59	0	0	48	22	0	0	40	24	0	0	47	24	0	0	42	20	0	0	50	22	0	0	43	24	0	0	40	27	0	0	34	25	merge_repeat		chromOut
chr7	35635101	C	T	999	11 11 11 11 11 11 11 11	56	0	0	48	24	0	0	37	22	0	0	50	23	0	0	40	19	0	0	49	22	0	0	43	24	0	0	40	27	0	0	33	23	merge_repeat		chromOut
chr7	38342459	A	C	999	11 11 11 11 11 11 11 11	38	0	0	16	30	0	0	25	27	0	0	13	25	0	0	25	31	0	0	22	28	0	0	15	32	0	0	28	32	0	0	16	31	merge_repeat		chromOut	simple	nested	segmentDup
chr7	38342475	A	C	999	11 11 11 11 11 11 11 11	39	0	0	19	33	0	0	27	28	0	0	13	26	0	0	25	31	0	0	23	26	0	0	15	30	0	0	26	33	0	0	18	31	merge_repeat		chromOut	simple	nested	segmentDup
chr7	40816952	T	C	999	11 11 11 11 11 11 11 11	21	0	0	13	11	0	0	17	5	0	0	19	2	0	0	21	18	0	0	19	17	0	0	24	11	0	0	22	14	0	0	16	5	merge_repeat		chromOut		nested
chr7	40957356	T	C	999	11 11 11 11 11 11 11 11	26	0	0	16	26	0	0	11	15	0	0	16	20	0	0	25	29	0	0	22	13	0	0	12	17	0	0	17	24	0	0	11	18
chr7	40968337	G	C	999	11 11 11 11 11 11 11 11	27	0	0	26	13	0	0	27	17	0	0	15	12	0	0	22	14	0	0	32	28	0	0	28	16	0	0	29	14	0	0	26	12
chr7	40968341	T	A	999	11 11 11 11 11 11 11 11	27	0	0	25	13	0	0	25	16	0	0	15	12	0	0	21	15	0	0	31	28	0	0	26	17	0	0	27	14	0	0	25	12
chr7	40968342	G	T	999	11 11 11 11 11 11 11 11	27	0	0	25	13	0	0	25	17	0	0	15	12	0	0	21	15	0	0	31	28	0	0	26	17	0	0	27	14	0	0	25	12
chr7	40968346	T	C	999	11 11 11 11 11 11 11 11	28	0	0	25	14	0	0	26	18	0	0	15	13	0	0	21	16	0	0	31	30	0	0	26	17	0	0	28	14	0	0	26	12
chr7	41253994	A	G	999	11 11 11 11 11 11 11 11	55	0	0	26	34	0	0	41	29	0	0	28	38	0	0	26	44	0	0	20	38	0	0	25	30	0	0	39	38	0	0	31	34	merge_repeat					segmentDup
chr7	41446554	T	G	999	11 11 11 11 11 11 11 11	44	0	0	28	28	0	0	33	32	0	0	33	43	0	0	22	34	0	0	40	34	0	0	16	28	0	0	23	23	0	0	24	34
chr7	41635074	G	A	999	11 11 11 11 11 11 11 11	49	0	0	21	37	0	0	21	38	0	0	19	30	0	0	21	31	0	0	22	32	0	0	24	38	0	0	20	30	0	0	24	36	merge_repeat		chromOut
chr7	42850215	G	T	999	11 11 11 11 11 11 11 11	59	0	0	27	52	0	0	28	56	0	0	29	44	0	0	37	39	0	0	35	39	0	0	21	39	0	0	30	42	0	0	24	35	merge_repeat					segmentDup
chr7	43196803	G	C	999	11 11 11 11 11 11 11 11	116	0	1	71	69	0	0	63	59	0	0	61	59	0	1	72	68	1	0	72	51	0	1	63	63	1	2	67	68	2	0	63	51	merge_repeat		chromOut		nested	segmentDup
chr7	43893470	G	C	999	11 11 11 11 11 11 11 11	50	0	0	37	20	0	0	54	11	0	0	48	20	0	0	45	39	0	0	39	26	0	1	36	20	0	0	37	18	0	0	33	17	merge_repeat	trfMask	chromOut	simple
chr7	44572909	T	G	999	11 11 11 11 11 11 11 11	26	0	0	20	10	0	0	21	20	0	0	9	24	0	0	16	13	0	0	14	21	0	0	26	14	0	0	13	13	0	0	19	11	merge_repeat	trfMask	chromOut	simple
chr7	44572915	T	A	999	11 11 11 11 11 11 11 11	26	0	0	20	11	0	0	21	19	0	0	9	24	0	0	16	15	0	0	14	23	0	0	24	14	0	0	12	14	0	0	18	9
chr7	44572919	T	G	999	11 11 11 11 11 11 11 11	28	0	0	21	12	0	0	21	20	0	0	9	25	0	0	15	16	0	0	14	23	0	0	25	14	0	0	13	15	0	0	19	12
chr7	44572921	T	A	999	11 11 11 11 11 11 11 11	27	0	0	21	12	0	0	20	19	0	0	9	23	0	0	15	15	0	0	13	21	0	0	24	14	0	0	13	14	0	0	19	10	merge_repeat			simple
chr7	46004751	T	C	999	11 11 11 11 11 11 11 11	20	0	0	15	10	0	0	12	16	0	0	16	7	0	0	10	11	0	0	21	10	0	0	14	10	0	0	13	9	0	0	15	5	merge_repeat	trfMask	chromOut	simple
chr7	46004793	T	G	999	11 11 11 11 11 11 11 11	38	0	0	23	19	0	0	17	22	0	0	23	28	0	0	18	30	0	0	22	24	0	0	20	26	0	0	18	31	0	0	17	21	merge_repeat	trfMask		simple
chr7	46314971	G	T	999	11 11 11 11 11 11 11 11	21	0	0	12	19	0	0	5	16	0	0	10	22	0	0	10	32	0	0	6	20	0	0	9	22	0	0	11	22	0	0	12	13
chr7	46554418	C	A	999	11 11 11 11 11 11 11 11	31	0	0	27	13	0	0	21	10	0	0	24	8	0	0	26	16	0	0	25	16	0	0	23	9	0	0	32	21	0	0	23	10
chr7	46571803	T	G	999	11 11 11 11 11 11 11 11	28	0	0	20	8	0	0	37	3	0	0	36	10	0	0	29	5	0	0	32	10	0	0	36	12	0	0	36	11	0	0	31	12	merge_repeat	trfMask	chromOut	simple
chr7	46864967	C	G	999	11 11 11 11 11 11 11 11	43	0	0	28	26	0	0	24	27	0	0	22	33	0	0	24	31	0	0	27	26	0	0	32	25	0	0	27	23	0	0	15	28	merge_repeat		chromOut
chr7	46864997	C	T	999	11 11 11 11 11 11 11 11	45	0	0	33	25	0	0	19	28	0	0	19	31	0	0	27	36	0	0	31	31	0	0	33	31	0	0	28	28	0	0	19	26	merge_repeat		chromOut
chr7	46865057	C	A	999	11 11 11 11 11 11 11 11	38	0	0	29	29	0	0	12	28	0	0	23	27	0	0	23	35	0	0	26	34	0	0	24	34	0	0	20	33	0	0	14	24	merge_repeat		chromOut
chr7	46865092	G	C	999	11 11 11 11 11 11 11 11	40	0	0	31	30	0	0	18	26	0	0	19	33	0	0	19	28	0	0	24	35	0	0	18	29	0	0	17	33	0	0	10	30	merge_repeat		chromOut
chr7	46865093	G	T	999	11 11 11 11 11 11 11 11	39	0	0	31	30	0	0	18	26	0	0	19	34	0	0	19	28	0	0	24	34	0	0	18	29	0	0	17	33	0	0	9	30	merge_repeat		chromOut
chr7	48717137	C	A	999	11 11 11 11 11 11 11 11	21	0	0	22	3	0	0	27	3	0	0	20	1	0	1	25	2	0	0	21	2	0	1	22	1	0	1	22	4	0	0	18	3
chr7	49476621	C	A	999	11 11 11 11 11 11 11 11	23	0	0	14	15	0	0	15	17	0	0	9	21	0	0	11	21	0	0	19	20	0	0	8	15	1	0	17	14	0	0	14	10	merge_repeat		chromOut
chr7	49557190	G	T	999	11 11 11 11 11 11 11 11	22	0	0	14	17	0	0	14	15	0	0	11	11	0	0	14	8	0	0	12	18	0	0	20	16	0	0	18	13	0	0	8	14	merge_repeat		chromOut
chr7	49980287	A	C	999	11 11 11 11 11 11 11 11	55	0	0	20	35	0	0	21	39	0	0	39	27	0	0	26	39	0	0	39	36	0	0	35	34	0	0	33	33	0	0	28	34
chr7	52006815	G	T	999	11 11 11 11 11 11 11 11	47	0	0	26	21	0	0	34	27	0	0	38	29	0	0	33	34	0	0	34	35	0	0	31	29	0	0	45	23	0	0	29	24
chr7	53904233	C	A	999	11 11 11 11 11 11 11 11	51	0	0	39	34	0	0	39	40	0	0	28	34	0	0	23	28	0	0	35	26	0	0	27	38	0	0	46	36	0	0	29	37	merge_repeat		chromOut		nested
chr7	58108783	A	C	999	11 11 11 11 11 11 11 11	31	0	0	24	10	0	0	31	25	0	0	30	16	0	0	29	28	0	0	36	24	0	0	18	13	0	0	21	18	0	0	31	23	merge_repeat		chromOut		nested
chr7	60144577	A	C	999	11 11 11 11 11 11 11 11	35	0	0	20	15	0	0	21	23	0	0	28	34	0	0	24	23	0	0	32	21	0	0	24	14	1	0	21	24	0	0	21	35
chr7	60566212	T	C	999	11 11 11 11 11 11 11 11	51	0	0	32	38	0	0	26	43	0	0	39	38	0	0	30	34	0	0	23	46	0	0	23	35	0	0	26	25	0	0	25	38	merge_repeat					segmentDup
chr7	61623298	G	T	999	11 11 11 11 11 11 11 11	36	0	0	35	29	0	0	26	33	0	0	28	27	0	0	18	18	0	0	22	31	0	0	23	23	0	0	26	29	1	0	24	28	merge_repeat	trfMask	chromOut	simple	nested
chr7	62221443	G	A	999	11 11 11 11 11 11 11 11	33	0	0	14	25	0	0	21	16	0	1	19	22	0	0	25	22	0	0	18	29	0	0	18	21	0	0	14	19	0	0	15	20
chr7	62221444	A	G	999	11 11 11 11 11 11 11 11	33	0	0	13	25	0	0	22	15	0	1	19	22	0	0	25	22	0	0	19	28	0	0	18	22	0	0	14	19	0	0	15	20
chr7	64482601	A	C	795	11 11 11 11 11 11 11 11	55	0	0	12	43	0	2	15	51	0	0	20	62	0	0	20	66	0	0	13	58	0	0	14	55	0	1	14	54	0	0	16	48	merge_repeat			simple		segmentDup
chr7	64485094	A	G	999	11 11 11 11 11 11 11 11	153	0	0	89	126	0	0	103	116	0	0	113	97	0	0	95	93	0	0	105	89	0	0	90	63	0	0	75	102	0	0	78	101	merge_repeat			simple		segmentDup
chr7	65398923	G	A	999	11 11 11 11 11 11 11 11	59	0	0	35	40	0	0	39	47	0	0	34	39	0	0	28	35	0	0	33	31	0	0	29	38	0	0	27	32	0	0	32	37	merge_repeat		chromOut		nested
chr7	65497018	C	A	999	11 11 11 11 11 11 11 11	25	0	0	12	16	0	1	16	13	0	0	12	18	0	0	19	20	1	0	10	26	0	0	12	13	0	1	15	17	0	0	11	15	merge_repeat		chromOut	simple	nested
chr7	65778511	A	T	999	11 11 11 11 11 11 11 11	43	0	0	20	23	0	0	23	32	0	0	25	31	0	0	23	27	0	0	33	28	0	0	28	28	0	0	23	32	0	0	28	33	merge_repeat	trfMask	chromOut	simple	nested
chr7	65947310	T	C	999	11 11 11 11 11 11 11 11	50	0	0	30	33	0	0	36	25	0	0	31	19	0	0	41	26	0	0	41	26	0	0	37	35	0	0	39	24	0	0	38	14	merge_repeat		chromOut
chr7	66937769	A	C	999	11 11 11 11 11 11 11 11	46	0	0	18	41	0	0	33	22	0	0	24	29	0	0	29	29	0	0	26	42	0	0	26	33	0	0	29	24	0	0	14	32
chr7	66966856	C	G	999	11 11 11 11 11 11 11 11	25	0	0	13	15	0	0	10	15	0	0	11	20	0	0	27	26	0	0	25	29	0	0	23	24	0	0	19	11	0	0	13	20
chr7	67016333	A	C	999	11 11 11 11 11 11 11 11	39	0	0	26	25	0	0	18	27	0	0	17	22	0	0	20	24	0	0	12	31	0	0	25	24	0	0	19	29	0	0	9	40	merge_repeat		chromOut
chr7	67483776	A	G	999	11 11 11 11 11 11 11 11	45	0	0	30	28	0	0	39	26	0	0	37	30	0	0	26	27	0	0	31	25	0	0	24	21	0	0	39	21	0	0	26	30
chr7	69073996	A	C	999	11 11 11 11 11 11 11 11	30	0	0	22	24	0	0	13	17	0	0	19	23	0	0	20	15	0	0	27	23	0	0	19	17	0	0	22	23	0	0	16	15	merge_repeat	trfMask	chromOut	simple
chr7	69424630	C	A	999	11 11 11 11 11 11 11 11	36	0	0	16	27	0	0	14	26	0	0	19	27	0	0	20	23	1	0	18	29	0	0	25	15	0	0	17	19	0	0	23	31	merge_repeat				nested
chr7	69825487	T	A	999	11 11 11 11 11 11 11 11	40	0	0	16	30	0	0	18	35	0	0	23	33	0	0	18	22	0	0	25	32	0	0	27	32	0	0	15	27	0	0	23	26	merge_repeat	trfMask	chromOut	simple
chr7	70297377	G	T	999	11 11 11 11 11 11 11 11	20	0	0	9	22	0	0	8	21	0	0	6	17	0	0	8	23	0	0	8	15	0	0	9	20	0	0	8	12	0	0	7	16	merge_repeat		chromOut		nested
chr7	72064755	G	A	999	11 11 11 11 11 11 11 11	62	0	0	33	30	0	0	33	45	0	0	31	31	0	0	33	43	0	0	33	49	0	0	46	34	0	0	39	45	0	0	29	35
chr7	75225064	T	G	999	11 11 11 11 11 11 11 11	21	0	0	27	8	0	0	24	5	0	0	13	8	0	0	24	10	0	0	16	9	0	0	16	15	0	0	21	12	0	1	18	9	merge_repeat	trfMask	chromOut	simple
chr7	75465893	A	C	999	11 11 11 11 11 11 11 11	69	0	0	35	38	0	0	46	40	0	0	36	41	0	0	35	35	0	0	45	51	0	0	28	41	0	0	32	42	0	0	33	47
chr7	77344888	G	T	999	11 11 11 11 11 11 11 11	40	0	0	15	25	0	0	15	33	0	0	23	24	0	0	16	38	0	0	30	23	0	0	20	40	0	0	13	42	0	0	21	28	merge_repeat		chromOut		nested
chr7	78050215	T	G	999	11 11 11 11 11 11 11 11	47	0	0	26	29	0	0	28	28	0	0	27	22	0	0	31	40	0	0	26	27	0	0	22	30	0	0	22	31	0	0	25	22
chr7	79002538	T	A	999	11 11 11 11 11 11 11 11	31	0	0	24	20	0	0	26	15	0	0	22	17	0	0	30	14	0	0	33	11	0	0	25	11	0	0	22	13	0	0	14	17	merge_repeat	trfMask	chromOut	simple
chr7	79257238	A	G	999	11 11 11 11 11 11 11 11	35	0	0	26	9	0	0	33	23	0	0	32	13	0	0	24	25	0	0	28	23	0	0	32	16	0	0	36	15	0	0	27	23	merge_repeat		chromOut
chr7	79296422	T	C	999	11 11 11 11 11 11 11 11	44	0	0	32	15	0	0	27	17	0	0	37	24	0	0	41	24	0	0	24	21	0	0	38	18	0	0	39	26	0	0	31	15
chr7	79296454	T	C	999	11 11 11 11 11 11 11 11	36	0	0	26	16	0	0	22	16	0	0	33	28	0	0	40	26	0	0	24	23	0	0	29	22	0	0	31	25	0	0	21	15
chr7	79474506	G	C	999	11 11 11 11 11 11 11 11	39	0	0	23	30	0	0	21	28	0	0	19	28	0	0	29	27	0	0	27	24	0	0	18	38	0	0	23	34	0	0	12	27
chr7	81962524	C	T	999	11 11 11 11 11 11 11 11	41	0	0	36	25	0	0	27	14	0	0	38	23	0	0	36	25	0	0	28	26	0	0	37	17	0	0	24	17	0	0	38	18
chr7	81962525	A	C	999	11 11 11 11 11 11 11 11	41	0	0	36	25	0	0	27	15	0	0	38	23	0	0	36	25	0	0	27	26	0	0	37	17	0	0	24	17	0	0	39	18
chr7	82600506	A	C	999	11 11 11 11 11 11 11 11	40	0	0	27	21	0	0	24	25	0	0	29	19	0	0	30	29	0	0	18	24	0	0	32	23	0	0	23	17	0	0	22	25	merge_repeat		chromOut		nested
chr7	85419980	C	A	999	11 11 11 11 11 11 11 11	42	0	0	29	33	0	0	24	37	0	0	30	27	0	0	19	23	0	0	26	26	0	0	31	30	0	0	33	34	0	0	37	32	merge_repeat		chromOut		nested	segmentDup
chr7	87834414	A	G	999	11 11 11 11 11 11 11 11	39	0	0	13	30	0	0	19	32	0	0	17	33	0	0	21	32	0	0	18	23	0	0	13	26	0	0	14	34	0	0	20	28
chr7	89029130	A	G	999	11 11 11 11 11 11 11 11	36	0	1	24	14	0	0	30	14	0	0	27	17	0	0	39	11	0	0	39	15	0	0	19	18	0	0	23	17	0	0	25	11	merge_repeat		chromOut		nested
chr7	89029137	T	G	999	11 11 11 11 11 11 11 11	35	0	0	23	17	0	0	29	15	0	0	26	20	0	0	39	13	0	0	39	14	0	0	20	16	0	0	19	16	0	0	22	15	merge_repeat		chromOut		nested
chr7	92454076	A	T	999	11 11 11 11 11 11 11 11	28	0	0	14	15	0	0	18	14	0	0	19	21	0	1	21	14	0	0	28	22	1	0	21	15	0	0	17	11	0	0	24	9	merge_repeat		chromOut	simple	nested
chr7	96201215	T	C	999	11 11 11 11 11 11 11 11	50	0	0	24	40	0	0	25	34	0	0	33	31	0	0	29	44	0	0	27	30	0	0	31	29	0	0	27	33	0	0	20	30
chr7	96778482	G	A	999	11 11 11 11 11 11 11 11	47	0	0	26	26	0	0	38	32	0	0	37	25	0	0	32	26	0	0	33	31	0	0	31	30	0	0	31	20	0	0	22	25	merge_repeat		chromOut
chr7	97413599	C	A	999	11 11 11 11 11 11 11 11	22	0	0	29	4	0	0	19	3	0	0	31	9	0	0	20	5	0	0	24	10	0	0	22	6	0	0	27	10	0	0	21	8
chr7	98011400	C	A	999	11 11 11 11 11 11 11 11	29	0	0	7	23	0	0	10	19	0	0	10	23	0	0	4	30	0	0	6	31	0	0	6	29	0	0	11	24	0	0	6	33	merge_repeat		chromOut		nested
chr7	98310650	T	G	999	11 11 11 11 11 11 11 11	26	0	0	7	24	1	0	17	28	1	0	8	32	0	2	15	35	0	0	12	23	1	0	14	32	0	0	15	27	0	0	8	18	merge_repeat	trfMask	chromOut	simple
chr7	99421788	C	A	999	11 11 11 11 11 11 11 11	25	0	0	33	4	0	0	24	4	0	0	25	2	0	0	42	2	0	0	21	6	0	0	23	4	0	0	20	6	0	0	20	5	merge_repeat		chromOut
chr7	100458782	A	G	999	11 11 11 11 11 11 11 11	23	0	0	17	6	0	0	20	12	0	0	15	12	0	0	13	11	0	0	10	13	0	0	15	10	0	0	18	12	0	0	16	9
chr7	102621355	A	G	999	11 11 11 11 11 11 11 11	41	0	0	20	29	0	0	28	35	0	0	22	24	0	0	22	20	0	0	16	25	0	0	23	20	0	0	21	30	0	0	13	31	merge_repeat		chromOut		nested
chr7	103392701	G	A	999	11 11 11 11 11 11 11 11	58	0	0	39	25	0	0	32	31	0	0	33	28	0	0	35	26	0	0	35	30	0	0	35	23	0	0	46	18	0	0	42	25	merge_repeat		chromOut		nested	segmentDup
chr7	103405894	A	G	999	11 11 11 11 11 11 11 11	47	0	0	41	24	0	0	26	27	0	0	22	35	0	0	35	42	0	0	32	31	0	0	28	28	0	0	28	19	0	0	31	32	merge_repeat					segmentDup
chr7	104614640	G	C	999	11 11 11 11 11 11 11 11	21	0	0	11	10	0	0	14	10	0	0	12	11	0	0	13	19	0	0	16	18	0	0	10	18	0	0	11	18	0	0	12	15	merge_repeat	trfMask	chromOut	simple
chr7	105551819	A	G	999	11 11 11 11 11 11 11 11	45	0	0	25	33	0	0	22	39	0	0	24	32	0	0	38	30	0	0	30	25	0	0	28	33	0	0	30	34	0	0	22	23
chr7	110734008	T	C	999	11 11 11 11 11 11 11 11	21	1	0	10	15	0	0	9	18	1	0	11	30	0	0	15	31	0	0	17	14	1	0	8	18	0	0	8	13	0	0	10	22	merge_repeat	trfMask	chromOut	simple
chr7	113647117	G	C	999	11 11 11 11 11 11 11 11	46	0	0	25	23	0	0	34	18	0	0	37	18	0	0	32	28	0	0	27	23	0	0	32	24	0	0	32	14	0	0	23	26	merge_repeat		chromOut		nested
chr7	113779676	C	G	999	11 11 11 11 11 11 11 11	43	0	0	24	19	0	0	31	24	0	0	30	25	0	0	29	28	0	0	39	28	0	0	23	22	0	0	23	26	0	0	20	27
chr7	113779715	A	G	999	11 11 11 11 11 11 11 11	39	0	0	24	21	0	0	29	22	0	0	30	24	0	0	26	26	0	0	34	23	0	0	22	25	0	0	24	24	0	0	17	22
chr7	113779733	A	G	999	11 11 11 11 11 11 11 11	35	0	0	24	22	0	0	28	24	0	0	31	21	0	0	22	36	0	0	33	24	0	0	22	27	0	0	26	23	0	0	16	19
chr7	113779795	A	G	999	11 11 11 11 11 11 11 11	47	0	0	38	29	0	0	33	23	0	0	25	23	0	0	21	36	0	0	21	26	0	0	29	35	0	0	24	29	0	0	32	31
chr7	113779875	T	G	999	11 11 11 11 11 11 11 11	52	0	0	44	31	0	0	41	29	0	0	27	29	0	0	31	31	0	0	22	40	0	0	30	33	0	0	27	25	0	0	34	32
chr7	113779884	T	G	999	11 11 11 11 11 11 11 11	51	0	0	43	31	0	0	43	32	0	0	26	30	0	0	32	29	0	0	21	39	0	0	34	30	0	0	27	24	0	0	36	32
chr7	114017675	G	A	999	11 11 11 11 11 11 11 11	20	0	0	16	8	0	0	11	9	0	0	21	17	0	0	23	19	0	0	24	18	0	0	19	16	0	0	20	4	0	0	16	21
chr7	115037388	T	C	999	11 11 11 11 11 11 11 11	53	0	0	32	30	0	0	46	34	0	0	36	30	0	0	47	27	0	0	36	33	0	0	29	32	0	0	28	25	0	0	35	31	merge_repeat				nested
chr7	115272430	G	T	999	11 11 11 11 11 11 11 11	39	0	0	18	30	0	0	19	30	0	0	20	20	0	0	24	35	0	0	28	31	0	0	21	18	0	0	23	32	0	0	20	26	merge_repeat			simple
chr7	116840919	T	A	999	11 11 11 11 11 11 11 11	39	0	0	28	11	0	0	33	26	0	0	31	24	0	0	34	16	0	0	26	26	0	0	34	28	0	0	22	29	0	0	26	18
chr7	117274812	C	A	999	11 11 11 11 11 11 11 11	38	0	0	26	17	0	0	23	22	0	0	26	19	0	0	22	16	0	0	24	15	0	0	23	15	0	0	21	27	0	0	24	19	merge_repeat		chromOut		nested
chr7	117274815	C	A	999	11 11 11 11 11 11 11 11	39	0	0	26	18	1	0	23	22	0	0	25	19	0	0	22	18	0	0	24	15	0	0	24	15	0	0	22	27	0	0	24	19	merge_repeat		chromOut		nested
chr7	117533336	A	G	999	11 11 11 11 11 11 11 11	27	0	0	21	35	0	0	26	22	0	0	29	25	0	0	28	46	0	0	28	28	0	0	25	19	0	0	20	27	0	0	12	15
chr7	120587566	T	C	999	11 11 11 11 11 11 11 11	37	0	0	20	30	0	0	16	27	0	0	17	22	0	0	21	26	0	0	23	21	0	0	18	22	0	0	22	24	0	0	20	17	merge_repeat		chromOut
chr7	120594969	G	T	999	11 11 11 11 11 11 11 11	31	0	0	20	27	0	0	13	18	0	0	15	25	0	0	25	21	0	0	19	28	0	0	24	13	0	0	27	16	0	0	28	19
chr7	120631735	C	T	999	11 11 11 11 11 11 11 11	51	0	0	36	41	0	0	34	25	0	0	29	22	0	0	28	28	0	0	28	30	0	0	23	30	0	0	30	30	0	0	27	37	merge_repeat		chromOut		nested
chr7	120636283	A	C	999	11 11 11 11 11 11 11 11	63	0	0	30	44	0	0	37	38	0	0	35	28	0	0	39	34	0	0	33	37	0	0	36	34	0	0	29	36	0	0	44	35
chr7	120693856	T	C	999	11 11 11 11 11 11 11 11	43	0	0	34	24	0	0	32	32	0	0	31	19	0	0	31	21	0	0	26	29	0	0	29	22	0	0	28	20	0	0	24	19	merge_repeat		chromOut
chr7	121947338	A	G	999	11 11 11 11 11 11 11 11	25	0	0	29	15	0	0	24	13	0	0	27	10	0	0	15	24	0	0	20	14	0	0	16	14	0	0	16	17	0	0	12	13	merge_repeat		chromOut
chr7	122968465	G	C	999	11 11 11 11 11 11 11 11	54	0	0	32	25	0	0	22	39	0	0	25	42	0	0	40	40	0	0	30	37	0	0	21	33	0	0	27	36	0	1	26	46	merge_repeat		chromOut
chr7	123212716	C	T	999	11 11 11 11 11 11 11 11	35	0	0	23	21	0	0	20	23	0	0	22	18	0	0	13	30	0	0	26	35	0	0	20	23	0	0	28	26	0	0	22	13
chr7	123349351	A	G	999	11 11 11 11 11 11 11 11	43	0	0	34	18	0	0	17	28	0	0	38	23	0	0	33	34	0	0	40	32	0	0	29	20	0	0	22	23	0	0	21	22	merge_repeat				nested
chr7	125036055	A	T	999	11 11 11 11 11 11 11 11	42	0	0	24	31	0	0	40	32	0	0	28	25	0	0	35	24	0	0	30	28	0	0	25	31	0	0	22	20	0	0	24	34
chr7	128389117	G	A	999	11 11 11 11 11 11 11 11	38	0	0	23	21	0	0	20	26	0	0	35	22	0	0	28	29	0	0	31	28	0	0	38	21	0	0	24	23	0	0	18	20
chr7	129277099	A	G	999	11 11 11 11 11 11 11 11	39	0	0	14	32	0	0	20	38	0	0	15	33	0	0	24	33	0	0	19	36	0	0	18	21	0	0	24	26	0	0	13	36	merge_repeat				nested
chr7	129303540	T	A	999	11 11 11 11 11 11 11 11	35	0	0	21	36	0	0	25	25	0	0	22	23	1	0	30	41	0	0	27	25	0	0	23	12	0	0	20	28	0	0	25	24
chr7	130070279	A	T	999	11 11 11 11 11 11 11 11	22	0	0	8	16	0	0	9	18	0	0	11	18	0	0	4	18	0	0	11	26	0	0	8	20	0	0	8	21	0	0	10	16
chr7	130070296	A	G	999	11 11 11 11 11 11 11 11	23	0	0	12	15	0	0	13	20	0	0	16	18	0	0	6	17	0	0	13	22	0	0	10	20	0	0	10	18	0	0	13	18
chr7	130135160	T	A	999	11 11 11 11 11 11 11 11	33	0	0	11	22	0	0	18	32	0	0	10	34	0	0	12	40	0	1	18	47	0	0	17	38	0	0	12	36	0	0	6	33
chr7	130950630	T	C	999	11 11 11 11 11 11 11 11	36	0	0	20	21	0	0	20	32	0	0	18	18	0	0	23	32	0	0	29	31	0	0	23	27	0	0	18	35	0	0	26	18
chr7	130992406	C	G	999	11 11 11 11 11 11 11 11	22	0	0	19	18	0	0	18	16	0	0	11	24	0	0	25	16	0	0	24	27	0	0	22	17	0	0	10	12	0	0	20	16	merge_repeat		chromOut
chr7	131018777	C	A	999	11 11 11 11 11 11 11 11	36	0	0	26	18	0	0	20	19	0	0	22	23	0	0	22	14	0	0	24	25	0	0	13	26	0	0	18	21	0	0	22	22	merge_repeat		chromOut		nested
chr7	131019377	C	G	999	11 11 11 11 11 11 11 11	33	0	0	25	24	0	0	18	15	0	0	30	11	0	0	21	18	0	0	31	14	0	0	15	19	0	0	16	21	0	0	25	17
chr7	131019379	C	G	999	11 11 11 11 11 11 11 11	33	0	0	25	24	0	0	18	15	0	0	30	11	0	0	21	18	0	0	31	14	0	0	14	19	0	0	16	21	0	0	25	17
chr7	131019382	C	A	999	11 11 11 11 11 11 11 11	32	0	0	25	23	1	0	17	14	0	0	30	11	0	0	21	18	0	0	31	14	0	0	14	19	0	0	16	20	0	0	25	17
chr7	131019385	T	A	999	11 11 11 11 11 11 11 11	32	0	0	25	23	0	0	18	14	0	0	30	12	0	0	21	18	0	0	31	14	0	0	14	19	0	0	16	21	0	0	25	17
chr7	131019387	T	A	999	11 11 11 11 11 11 11 11	32	0	0	25	24	0	0	18	15	0	0	30	12	0	0	21	18	0	0	31	14	0	0	13	19	0	0	16	21	0	0	25	17
chr7	131019391	T	A	999	11 11 11 11 11 11 11 11	35	0	0	25	25	0	0	19	16	0	0	30	14	0	0	21	18	0	0	31	17	0	0	15	21	0	0	16	22	0	0	25	19
chr7	131019393	T	G	999	11 11 11 11 11 11 11 11	35	0	0	25	25	0	0	19	16	0	0	30	14	0	0	21	18	0	0	31	17	0	0	15	21	0	0	16	22	0	0	25	19
chr7	131019425	C	A	999	11 11 11 11 11 11 11 11	50	0	0	28	33	0	0	29	27	0	0	34	16	0	0	28	24	0	0	32	28	0	0	26	24	0	0	30	30	0	0	34	19
chr7	131041619	A	G	999	11 11 11 11 11 11 11 11	54	0	0	29	34	0	0	21	37	0	0	33	31	0	0	44	30	0	0	32	26	0	0	28	26	0	0	36	31	0	0	31	31
chr7	131041625	T	C	999	11 11 11 11 11 11 11 11	54	0	0	29	35	0	0	21	37	0	0	32	31	0	0	41	29	0	0	33	26	0	0	28	26	0	0	34	32	0	0	30	27
chr7	131065072	C	A	999	11 11 11 11 11 11 11 11	59	0	0	24	39	1	0	37	35	0	0	34	29	0	0	24	35	0	0	24	38	0	0	31	41	0	0	23	47	0	0	40	46
chr7	131080811	C	A	999	11 11 11 11 11 11 11 11	65	0	0	35	33	0	0	47	39	0	0	34	31	0	0	49	41	0	0	36	34	0	0	35	30	0	0	43	36	0	0	29	48
chr7	131080843	C	A	999	11 11 11 11 11 11 11 11	72	0	0	38	40	0	0	46	47	0	0	33	44	0	0	39	48	0	0	38	34	0	0	35	39	0	0	42	34	0	0	31	53
chr7	131107212	C	A	999	11 11 11 11 11 11 11 11	42	0	0	30	24	0	0	29	29	0	0	28	22	0	0	32	19	0	0	28	19	0	0	27	19	0	0	21	21	0	0	26	18	merge_repeat	trfMask	chromOut	simple	nested
chr7	131107296	C	A	999	11 11 11 11 11 11 11 11	31	0	0	19	20	0	0	17	23	0	0	24	29	0	1	19	29	0	0	14	17	0	0	18	21	0	0	20	13	0	0	20	20	merge_repeat	trfMask		simple	nested
chr7	131107310	C	A	999	11 11 11 11 11 11 11 11	27	0	0	23	19	0	0	16	22	0	0	25	23	0	0	20	25	0	0	15	12	0	0	18	23	0	1	19	12	0	0	23	17	merge_repeat	trfMask	chromOut	simple	nested
chr7	131107449	T	C	999	11 11 11 11 11 11 11 11	20	0	0	15	12	0	0	10	19	0	0	11	9	0	0	27	20	0	0	18	17	0	0	12	14	0	0	17	12	0	0	22	9	merge_repeat	trfMask	chromOut	simple	nested
chr7	131108204	T	G	999	11 11 11 11 11 11 11 11	51	0	0	35	29	0	0	47	32	0	0	38	41	0	0	40	28	0	0	34	26	0	0	31	34	0	0	26	26	0	0	26	25
chr7	131108216	C	G	999	11 11 11 11 11 11 11 11	50	0	0	33	28	0	0	48	31	0	0	36	40	0	0	42	28	0	0	33	26	0	0	28	33	0	0	24	32	0	0	26	24
chr7	132657237	A	G	999	11 11 11 11 11 11 11 11	41	0	0	23	18	0	0	30	30	0	0	30	34	0	0	32	40	0	0	24	34	0	0	22	34	0	0	24	36	0	0	26	22
chr7	137153890	G	C	999	11 11 11 11 11 11 11 11	41	0	0	37	29	0	0	30	40	0	0	31	31	0	0	19	22	0	0	30	34	0	0	26	37	0	0	30	37	0	0	27	28	merge_repeat				nested
chr7	140420607	T	G	999	11 11 11 11 11 11 11 11	37	0	0	19	33	0	0	21	19	0	0	20	28	0	0	38	25	0	0	29	28	0	0	14	23	0	0	26	28	0	0	21	42
chr7	141111540	T	C	999	11 11 11 11 11 11 11 11	24	0	0	18	16	0	0	19	19	0	0	19	24	0	0	20	23	0	0	17	20	0	0	18	19	0	0	9	26	0	0	14	10	merge_repeat		chromOut
chr7	141111562	T	C	999	11 11 11 11 11 11 11 11	22	0	0	17	14	0	0	13	12	0	0	17	20	0	0	20	20	0	0	12	18	0	0	19	15	0	0	11	22	0	0	13	9	merge_repeat		chromOut
chr7	141638697	G	T	999	11 11 11 11 11 11 11 11	72	0	0	29	50	0	0	30	46	0	0	24	48	0	0	23	49	0	0	30	57	0	0	28	64	0	0	33	60	0	0	33	52	merge_repeat			simple
chr7	141701334	A	C	999	11 11 11 11 11 11 11 11	39	0	0	15	24	0	0	25	30	0	0	25	26	0	0	26	16	0	0	30	23	0	0	29	32	0	0	29	18	0	0	20	25
chr7	141701485	A	G	999	11 11 11 11 11 11 11 11	30	0	0	10	20	0	0	19	17	0	0	16	31	0	0	17	20	0	0	14	32	0	0	20	26	0	0	23	25	0	0	13	22
chr7	141701486	A	G	999	11 11 11 11 11 11 11 11	31	0	0	11	20	0	0	19	17	0	0	16	31	0	0	17	20	0	0	15	32	0	0	20	26	0	0	23	25	0	0	13	22
chr7	141701487	A	T	999	11 11 11 11 11 11 11 11	31	0	0	11	20	0	0	19	17	0	0	16	31	0	0	17	19	0	0	14	32	0	0	20	26	0	0	23	25	0	0	13	22
chr7	141701626	G	A	999	11 11 11 11 11 11 11 11	35	0	0	20	15	0	0	17	23	1	0	26	21	0	0	22	20	0	0	22	25	0	0	19	28	0	0	26	25	0	0	16	22	merge_repeat		chromOut
chr7	141701749	T	A	999	11 11 11 11 11 11 11 11	32	0	0	32	13	0	0	24	21	0	0	43	23	0	0	37	22	0	0	28	15	0	0	35	25	0	0	28	22	0	0	26	6	merge_repeat		chromOut
chr7	141701750	T	C	999	11 11 11 11 11 11 11 11	32	0	0	31	13	0	0	24	21	0	0	44	23	0	0	37	22	0	0	28	15	0	0	35	25	0	0	28	22	0	0	26	6	merge_repeat		chromOut
chr7	141701751	T	A	999	11 11 11 11 11 11 11 11	32	0	0	31	13	0	0	24	21	0	0	44	23	0	0	37	22	0	0	28	15	0	0	35	25	0	0	28	22	0	0	26	6	merge_repeat		chromOut
chr7	141701752	T	A	999	11 11 11 11 11 11 11 11	32	0	0	32	13	0	0	24	21	0	0	44	23	0	0	37	22	0	0	28	15	0	0	35	25	0	0	28	22	0	0	26	6	merge_repeat		chromOut
chr7	141701753	T	C	999	11 11 11 11 11 11 11 11	32	0	0	32	13	0	0	24	21	0	0	44	23	0	0	37	22	0	0	28	15	0	0	35	25	0	0	28	22	0	0	26	6	merge_repeat		chromOut
chr7	141701771	T	A	999	11 11 11 11 11 11 11 11	40	0	0	35	19	0	0	31	25	0	0	41	26	0	0	40	24	0	0	28	21	0	0	36	30	0	0	33	24	0	0	29	11	merge_repeat		chromOut
chr7	142308435	C	A	999	11 11 11 11 11 11 11 11	21	0	0	16	16	0	0	14	13	0	0	15	11	0	0	15	14	0	0	13	17	0	0	7	14	0	0	19	11	0	0	11	20	merge_repeat		chromOut		nested
chr7	142437766	C	A	999	11 11 11 11 11 11 11 11	26	0	0	13	13	0	0	25	13	0	0	20	13	0	0	23	16	0	1	15	12	0	0	23	7	0	0	18	9	0	0	21	11
chr7	142437787	T	C	999	11 11 11 11 11 11 11 11	21	0	0	15	9	0	0	27	11	0	0	24	7	0	0	23	9	0	0	14	7	0	0	28	6	0	0	22	6	0	0	21	11
chr7	142933478	G	A	999	11 11 11 11 11 11 11 11	21	0	0	7	18	0	0	5	16	0	0	11	15	0	0	16	15	0	0	23	18	0	0	6	15	0	0	8	18	0	0	6	18	merge_repeat				nested
chr7	143160850	G	T	999	11 11 11 11 11 11 11 11	29	0	0	18	11	0	0	17	21	0	0	24	19	0	0	19	25	0	0	21	30	0	0	24	17	0	0	18	20	0	0	16	16
chr7	143160851	G	T	999	11 11 11 11 11 11 11 11	29	0	0	18	11	0	0	17	21	0	0	24	19	0	0	19	24	0	0	21	30	0	0	24	17	0	0	18	20	0	0	16	16
chr7	143160854	G	T	999	11 11 11 11 11 11 11 11	29	0	0	18	11	0	0	17	21	0	0	25	19	0	0	19	25	0	0	22	32	0	0	24	18	0	0	18	22	0	0	16	16	merge_repeat			simple
chr7	143341131	T	C	999	11 11 11 11 11 11 11 11	22	0	0	10	23	0	0	7	21	0	0	8	29	0	0	10	22	0	0	17	21	0	0	6	25	0	0	3	27	0	0	7	15
chr7	143478503	T	C	999	11 11 11 11 11 11 11 11	37	0	0	14	26	0	0	21	22	0	0	19	18	0	0	20	29	0	0	27	31	0	0	25	34	0	0	26	29	0	0	16	23
chr7	143509113	T	C	999	11 11 11 11 11 11 11 11	20	0	0	18	19	0	0	18	17	0	0	16	11	0	0	16	10	0	0	22	17	0	0	13	11	0	0	17	12	0	0	7	13	merge_repeat		chromOut
chr7	143602483	T	C	999	11 11 11 11 11 11 11 11	27	0	0	24	3	0	0	25	4	0	0	25	6	0	0	40	5	0	0	28	4	0	0	31	3	0	0	25	4	0	0	27	5	merge_repeat		chromOut		nested
chr7	145162333	A	G	999	11 11 11 11 11 11 11 11	49	1	0	35	13	0	0	34	21	0	0	38	13	0	0	32	20	0	0	27	25	0	0	35	25	0	0	29	21	0	0	25	34	merge_repeat		chromOut		nested