chr	position	ref	alt	quality	samtools_GT_RAW	min_depth	1RF	1RR	1AF	1AR	2RF	2RR	2AF	2AR	3RF	3RR	3AF	3AR	4RF	4RR	4AF	4AR	5RF	5RR	5AF	5AR	6RF	6RR	6AF	6AR	7RF	7RR	7AF	7AR	8RF	8RR	8AF	8AR	merge_repeat	trfMask	chromOut	simple	nested	segmentDup
chr6	3244572	A	T	999	11 11 11 11 11 11 11 11	43	0	0	24	25	0	0	37	29	0	0	21	26	0	0	20	23	0	0	26	21	0	0	20	29	0	0	31	27	0	0	27	39	merge_repeat					segmentDup
chr6	5897994	G	A	999	11 11 11 11 11 11 11 11	31	0	0	24	10	0	0	33	8	0	0	27	9	0	0	49	7	0	0	38	12	0	0	27	4	0	0	30	7	0	0	28	3
chr6	7813891	T	A	999	11 11 11 11 11 11 11 11	22	0	0	11	11	0	0	19	12	0	0	16	15	0	0	15	19	0	0	13	27	0	0	17	14	0	0	13	9	0	0	16	9	merge_repeat	trfMask	chromOut	simple
chr6	9222448	C	G	999	11 11 11 11 11 11 11 11	22	0	0	18	18	0	0	24	18	0	0	16	20	0	0	31	29	0	0	24	23	0	0	8	14	0	0	23	17	0	0	16	21	merge_repeat	trfMask	chromOut	simple
chr6	10632348	T	C	999	11 11 11 11 11 11 11 11	27	1	0	22	10	0	0	21	8	0	0	16	11	0	1	14	13	0	0	23	16	0	0	20	17	0	0	26	10	0	1	19	14	merge_repeat		chromOut		nested
chr6	10632349	G	C	999	11 11 11 11 11 11 11 11	27	1	0	22	10	0	0	21	8	0	0	16	11	0	1	14	13	0	0	23	16	0	0	20	17	0	0	26	10	0	1	19	14	merge_repeat		chromOut		nested
chr6	10858801	T	C	999	11 11 11 11 11 11 11 11	45	0	0	25	22	0	0	29	27	0	0	41	13	0	0	35	32	0	0	13	32	0	0	27	23	0	0	30	35	0	0	32	35	merge_repeat		chromOut		nested
chr6	11161518	C	G	999	11 11 11 11 11 11 11 11	37	0	0	38	12	0	0	44	26	0	0	39	26	0	0	30	20	0	0	21	27	0	0	23	14	0	0	31	28	0	0	32	25	merge_repeat		chromOut	simple	nested
chr6	12984305	G	A	999	11 11 11 11 11 11 11 11	51	0	0	31	27	0	0	46	33	0	0	20	34	0	0	37	31	0	0	26	36	0	0	32	19	0	0	22	30	0	0	30	34	merge_repeat		chromOut
chr6	13276357	C	G	999	11 11 11 11 11 11 11 11	61	0	0	41	43	0	0	36	30	0	0	31	36	0	0	33	37	0	0	36	36	0	0	33	28	0	0	37	34	0	0	37	30	merge_repeat		chromOut		nested
chr6	13276374	A	G	999	11 11 11 11 11 11 11 11	60	0	0	38	44	0	0	39	30	0	0	30	39	0	0	35	37	0	0	29	34	0	0	33	27	0	0	34	33	0	0	39	29	merge_repeat		chromOut		nested
chr6	14222982	G	T	999	11 11 11 11 11 11 11 11	26	0	0	10	26	0	0	10	21	0	0	11	31	0	0	12	31	0	0	5	30	0	0	6	31	0	0	9	20	0	0	7	19
chr6	17709920	A	G	999	11 11 11 11 11 11 11 11	51	0	0	32	30	0	0	32	34	0	0	40	39	0	0	31	32	0	0	31	41	0	0	31	24	0	0	25	27	0	0	28	23
chr6	22655132	A	G	999	11 11 11 11 11 11 11 11	49	0	0	26	26	0	0	39	18	0	0	29	23	0	0	21	28	0	0	26	25	0	0	28	27	0	0	30	21	0	0	26	24	merge_repeat		chromOut
chr6	22745337	T	C	999	11 11 11 11 11 11 11 11	61	0	0	38	27	0	0	44	39	0	0	34	30	0	0	27	34	0	0	37	35	0	0	37	30	0	0	42	42	0	0	27	45
chr6	22971241	G	A	999	11 11 11 11 11 11 11 11	54	0	0	32	24	0	0	29	41	0	0	30	36	0	0	51	44	0	0	31	38	0	0	23	31	0	0	38	35	0	0	39	32	merge_repeat				nested
chr6	25387408	T	A	999	11 11 11 11 11 11 11 11	70	0	0	33	42	0	0	38	42	0	1	42	37	1	0	29	40	0	0	49	42	0	0	43	30	0	0	38	44	0	0	44	45
chr6	25780814	A	C	999	11 11 11 11 11 11 11 11	45	1	0	33	26	0	0	24	23	0	0	29	16	2	0	28	30	0	0	27	30	0	0	22	31	0	0	16	29	0	1	31	35	merge_repeat		chromOut		nested
chr6	25780815	C	A	999	11 11 11 11 11 11 11 11	45	1	2	33	26	0	0	24	23	0	0	29	16	1	0	29	30	1	0	27	30	0	0	22	31	0	0	16	29	0	1	31	35	merge_repeat		chromOut		nested
chr6	25973057	T	G	999	11 11 11 11 11 11 11 11	40	0	0	23	23	0	0	17	23	0	0	25	25	0	0	25	23	0	0	21	28	0	0	28	17	0	0	17	27	0	0	24	20	merge_repeat	trfMask	chromOut	simple
chr6	27517076	A	G	999	11 11 11 11 11 11 11 11	29	0	0	21	10	0	0	21	10	1	0	20	12	0	0	25	9	0	0	27	13	0	0	24	5	1	0	19	10	0	0	33	6	merge_repeat	trfMask	chromOut	simple
chr6	28652788	T	A	999	11 11 11 11 11 11 11 11	61	0	0	42	33	0	0	39	34	0	0	30	34	0	0	43	32	0	0	38	36	0	0	36	25	0	0	39	30	0	0	38	31
chr6	29080203	C	T	999	11 11 11 11 11 11 11 11	28	0	0	13	15	0	0	15	27	0	0	23	24	0	0	22	28	1	0	18	33	1	0	17	22	0	0	20	21	0	0	9	23	merge_repeat		chromOut
chr6	29080208	C	A	999	11 11 11 11 11 11 11 11	29	1	0	14	14	0	0	17	25	0	0	23	24	0	0	23	27	0	0	19	34	0	0	22	21	0	0	22	19	0	0	11	21	merge_repeat		chromOut
chr6	29080212	C	T	999	11 11 11 11 11 11 11 11	30	0	0	12	18	0	0	18	29	0	0	25	25	1	0	28	29	0	0	20	35	1	0	18	23	0	0	21	23	0	0	12	27	merge_repeat		chromOut
chr6	29080251	C	T	999	11 11 11 11 11 11 11 11	43	0	0	25	19	0	0	27	22	0	0	43	25	0	0	47	30	0	0	30	39	0	0	22	21	0	0	27	27	0	0	19	25	merge_repeat		chromOut
chr6	29080266	C	T	999	11 11 11 11 11 11 11 11	44	0	0	29	17	0	0	30	21	0	0	43	24	0	0	53	28	0	0	34	39	0	0	24	20	0	0	29	26	0	0	20	25	merge_repeat		chromOut
chr6	29080351	T	C	999	11 11 11 11 11 11 11 11	48	0	0	44	16	1	0	39	23	0	0	48	28	0	0	55	22	0	0	38	32	0	0	41	18	0	0	31	18	0	0	33	15
chr6	29080383	T	C	999	11 11 11 11 11 11 11 11	42	0	0	46	18	0	0	39	28	0	0	41	27	0	0	48	21	0	0	29	26	0	0	40	23	0	0	23	19	0	0	34	14
chr6	29080392	G	A	999	11 11 11 11 11 11 11 11	43	0	0	43	18	0	0	41	29	0	0	40	24	0	0	50	21	0	0	31	21	0	0	40	22	0	0	21	22	0	0	33	16
chr6	29080396	G	A	999	11 11 11 11 11 11 11 11	42	0	0	42	20	0	0	43	30	0	0	41	25	0	0	48	21	0	0	33	20	0	0	40	23	0	0	20	22	0	0	32	16
chr6	29080418	G	A	999	11 11 11 11 11 11 11 11	47	0	0	39	19	0	0	43	29	0	0	40	27	0	0	43	20	0	0	33	21	0	0	36	23	0	0	26	21	0	0	30	17
chr6	29383331	A	T	999	11 11 11 11 11 11 11 11	21	0	0	12	21	0	0	15	6	0	0	11	13	0	0	20	22	0	0	13	27	0	0	7	16	0	1	7	28	0	0	12	18	merge_repeat		chromOut
chr6	29601719	C	A	999	11 11 11 11 11 11 11 11	20	0	1	7	16	0	0	15	7	0	0	13	17	0	0	8	12	0	0	11	22	0	0	12	19	0	0	10	13	0	0	10	10	merge_repeat		chromOut
chr6	29610444	C	A	999	11 11 11 11 11 11 11 11	22	0	0	14	8	1	0	21	8	0	0	23	13	0	0	29	6	0	0	12	10	0	0	20	2	0	0	23	7	0	1	20	11
chr6	29624491	T	C	999	11 11 11 11 11 11 11 11	22	1	0	13	8	0	0	33	6	0	0	25	6	0	0	32	5	0	0	25	7	0	0	22	9	0	0	24	4	0	0	20	2	merge_repeat		chromOut
chr6	30751393	G	C	999	11 11 11 11 11 11 11 11	45	0	0	31	25	0	0	38	20	0	0	37	25	0	0	36	31	0	0	29	25	0	0	23	27	0	0	38	30	0	0	22	23
chr6	30922499	T	G	999	11 11 11 11 11 11 11 11	46	0	0	18	43	0	0	14	32	0	0	21	40	0	0	18	33	0	0	26	40	0	0	17	39	0	0	22	37	0	0	16	31
chr6	32041350	A	T	999	11 11 11 11 11 11 11 11	21	0	0	19	8	0	0	17	12	0	0	11	10	0	0	28	9	0	0	21	13	0	0	14	15	0	0	22	10	0	0	13	9	merge_repeat	trfMask	chromOut	simple
chr6	32344245	C	T	999	11 11 11 11 11 11 11 11	30	0	0	7	23	0	0	4	31	0	0	8	28	0	0	7	42	0	0	10	37	0	0	6	28	0	0	14	28	0	0	10	34
chr6	33842570	G	T	999	11 11 11 11 11 11 11 11	23	0	0	19	20	0	1	16	24	0	0	13	10	0	0	21	29	0	0	16	23	0	0	18	23	0	0	15	28	0	0	19	20
chr6	33857021	C	A	999	11 11 11 11 11 11 11 11	43	0	0	18	25	0	0	26	27	0	0	35	32	0	0	25	31	0	0	29	40	0	0	23	39	0	0	22	34	0	0	25	25
chr6	35020335	G	C	999	11 11 11 11 11 11 11 11	46	0	0	26	22	0	0	41	23	0	0	28	23	0	0	34	27	0	0	38	17	0	0	32	26	0	0	31	15	0	0	25	25
chr6	35366219	A	C	999	11 11 11 11 11 11 11 11	46	0	0	18	30	0	0	25	23	0	0	23	23	0	0	36	43	0	0	35	28	0	0	39	27	0	0	30	28	0	0	33	34	merge_repeat		chromOut
chr6	36463924	T	A	999	11 11 11 11 11 11 11 11	33	0	0	30	15	0	0	22	14	0	0	26	17	1	0	30	26	0	0	30	23	0	0	22	19	0	0	33	26	0	0	16	17
chr6	36463939	G	A	999	11 11 11 11 11 11 11 11	36	0	0	37	19	0	0	24	15	0	0	27	23	0	0	36	27	0	0	35	25	0	0	23	21	0	0	38	28	0	0	18	18
chr6	36632449	G	A	999	11 11 11 11 11 11 11 11	42	0	0	27	27	0	0	14	28	0	0	21	30	0	0	23	44	0	0	19	39	0	0	22	25	0	0	24	29	0	0	24	37
chr6	36632633	G	A	999	11 11 11 11 11 11 11 11	45	0	0	23	29	0	0	27	26	0	0	22	23	0	0	42	32	0	0	22	23	0	0	28	33	0	0	28	22	0	0	28	21	merge_repeat			simple
chr6	37151583	T	G	999	11 11 11 11 11 11 11 11	22	0	0	10	12	0	0	16	11	0	0	9	16	0	0	9	16	0	0	13	18	0	0	10	18	0	0	9	13	0	0	18	11	merge_repeat	trfMask	chromOut	simple
chr6	38788357	T	G	999	11 11 11 11 11 11 11 11	29	0	0	23	17	0	0	21	22	0	0	24	16	0	0	25	24	0	0	18	25	0	0	26	20	0	0	12	17	0	0	13	26	merge_repeat	trfMask	chromOut	simple
chr6	38837879	C	A	999	11 11 11 11 11 11 11 11	42	0	0	20	32	0	0	12	30	0	1	26	27	0	0	27	36	0	0	25	46	0	0	21	29	0	0	22	41	0	0	31	34	merge_repeat		chromOut
chr6	38837883	C	A	999	11 11 11 11 11 11 11 11	40	0	0	19	30	0	0	10	30	0	0	24	30	0	0	29	36	0	0	25	47	0	0	20	33	0	0	23	40	0	0	27	35	merge_repeat		chromOut
chr6	38837887	G	A	999	11 11 11 11 11 11 11 11	39	0	0	18	30	0	0	10	29	0	0	24	30	0	0	29	38	0	0	26	45	0	0	18	34	0	0	22	39	0	0	26	35	merge_repeat		chromOut
chr6	39610910	T	A	999	11 11 11 11 11 11 11 11	23	0	0	19	11	0	0	19	13	0	0	12	11	0	0	25	6	1	0	26	13	0	0	14	9	0	0	17	7	0	0	11	15	merge_repeat		chromOut
chr6	43909851	G	C	999	11 11 11 11 11 11 11 11	47	0	0	34	34	0	0	26	32	0	0	22	25	0	1	41	23	0	0	28	36	0	0	29	36	0	0	34	27	0	0	28	27	merge_repeat		chromOut		nested
chr6	45615644	T	C	999	11 11 11 11 11 11 11 11	35	0	0	12	39	0	0	11	32	0	0	17	31	0	0	16	36	0	0	19	30	0	0	13	22	0	0	9	31	0	0	10	26
chr6	45615647	T	C	999	11 11 11 11 11 11 11 11	35	0	0	12	40	0	0	11	32	0	0	17	31	0	0	15	36	0	0	19	29	0	0	13	22	0	0	9	31	0	0	10	26
chr6	46307958	A	C	999	11 11 11 11 11 11 11 11	24	0	0	12	18	0	0	13	23	0	0	9	22	0	0	22	16	0	0	19	19	0	0	9	15	0	0	16	20	0	0	13	23	merge_repeat	trfMask	chromOut	simple
chr6	46405724	G	T	999	11 11 11 11 11 11 11 11	33	0	0	13	20	0	0	12	24	0	0	17	22	0	0	13	22	0	0	21	34	0	0	17	16	0	0	18	28	1	0	16	23
chr6	46405734	G	T	999	11 11 11 11 11 11 11 11	24	0	0	9	17	1	0	8	20	0	0	13	18	0	0	11	13	0	0	18	27	0	0	11	14	0	0	17	20	0	0	13	14
chr6	46405741	G	T	999	11 11 11 11 11 11 11 11	26	0	0	11	17	0	0	12	20	0	0	14	19	0	0	13	13	0	0	19	27	0	0	15	15	0	0	19	20	0	0	16	14
chr6	47505932	T	C	999	11 11 11 11 11 11 11 11	27	0	0	24	10	0	0	18	9	0	0	26	16	0	0	30	14	0	0	22	12	0	0	21	15	0	2	29	16	0	0	22	14	merge_repeat		chromOut	simple
chr6	49012618	C	T	999	11 11 11 11 11 11 11 11	21	0	0	11	15	0	0	16	21	0	0	12	9	0	0	21	21	0	0	26	32	0	0	24	15	0	0	10	17	0	0	14	13	merge_repeat	trfMask	chromOut	simple
chr6	49503216	C	A	999	11 11 11 11 11 11 11 11	22	0	0	15	21	0	0	6	19	0	0	4	18	0	0	14	29	0	0	9	14	0	0	5	22	0	0	6	17	0	0	7	20	merge_repeat		chromOut
chr6	49606212	G	A	999	11 11 11 11 11 11 11 11	46	0	0	24	24	0	0	34	21	0	0	21	25	0	0	26	26	0	0	28	25	0	0	27	28	0	0	22	27	0	0	29	30
chr6	49920980	A	T	999	11 11 11 11 11 11 11 11	34	0	0	36	15	0	0	24	19	0	0	18	16	0	0	24	26	0	0	33	17	0	0	28	19	0	0	29	17	0	0	22	19
chr6	50281407	T	G	999	11 11 11 11 11 11 11 11	50	0	0	25	27	0	0	19	31	0	0	31	31	0	0	32	33	0	0	38	26	0	0	28	26	0	0	24	31	0	0	31	33	merge_repeat		chromOut
chr6	50889957	T	A	999	11 11 11 11 11 11 11 11	29	0	0	19	21	0	0	22	16	0	0	26	19	0	0	14	22	0	0	23	26	0	0	16	13	0	0	21	23	0	0	23	25
chr6	51094299	A	T	999	11 11 11 11 11 11 11 11	58	0	0	35	31	0	0	33	29	0	0	31	37	0	0	31	27	0	0	34	37	0	0	38	23	0	0	25	40	0	0	38	37
chr6	51114784	T	A	999	11 11 11 11 11 11 11 11	45	0	0	17	28	0	0	31	29	0	0	29	34	0	0	34	36	0	0	23	33	0	0	26	31	0	0	26	26	0	0	35	29	merge_repeat		chromOut		nested
chr6	51621046	T	A	999	11 11 11 11 11 11 11 11	22	0	0	17	5	0	0	20	13	0	0	24	9	0	0	20	16	1	0	39	9	0	0	15	13	0	0	20	14	0	0	25	11	merge_repeat	trfMask	chromOut	simple
chr6	52652161	C	T	999	11 11 11 11 11 11 11 11	35	0	0	27	37	0	0	22	30	0	0	19	29	0	0	21	26	0	0	31	43	0	0	27	27	0	0	29	18	0	0	17	18	merge_repeat		chromOut		nested
chr6	53213714	A	T	999	11 11 11 11 11 11 11 11	43	0	0	13	33	0	0	19	41	0	0	18	37	0	0	24	28	0	0	27	33	0	0	22	28	0	0	23	26	0	0	15	28	merge_repeat		chromOut
chr6	55325936	A	G	999	11 11 11 11 11 11 11 11	47	0	0	21	26	0	0	22	33	0	0	20	31	0	0	25	45	0	0	25	35	0	0	29	35	0	0	25	28	0	0	21	28	merge_repeat		chromOut
chr6	56290437	G	T	999	11 11 11 11 11 11 11 11	43	0	0	31	33	0	0	26	31	0	0	22	21	0	0	27	30	0	0	33	34	0	0	27	27	0	0	32	21	0	0	26	30
chr6	58208595	A	G	999	11 11 11 11 11 11 11 11	59	1	0	42	24	0	0	38	36	0	0	49	27	1	0	30	28	0	0	40	27	0	0	33	39	0	0	35	33	0	0	43	36	merge_repeat		chromOut
chr6	59487725	G	A	999	11 11 11 11 11 11 11 11	56	0	0	34	36	0	0	38	27	0	0	38	37	0	0	35	33	0	0	29	27	0	0	26	36	0	0	37	35	0	0	31	39	merge_repeat		chromOut		nested
chr6	60462613	T	C	999	11 11 11 11 11 11 11 11	37	0	0	15	26	0	0	20	39	0	0	13	30	0	0	11	30	0	0	10	29	0	0	6	31	0	0	12	28	0	0	9	29	merge_repeat		chromOut
chr6	60462632	T	C	999	11 11 11 11 11 11 11 11	32	0	0	13	22	0	0	20	35	0	0	12	27	0	0	15	28	0	0	9	26	0	0	6	26	0	0	14	24	0	0	8	24	merge_repeat		chromOut
chr6	60506231	T	A	999	11 11 11 11 11 11 11 11	36	0	0	27	24	0	0	15	21	0	0	23	18	0	0	18	26	0	0	21	21	0	0	33	10	0	0	21	18	0	0	21	23	merge_repeat		chromOut		nested
chr6	60506301	T	C	999	11 11 11 11 11 11 11 11	38	0	0	36	28	1	0	28	32	0	0	20	18	0	0	32	23	0	0	29	17	0	0	28	15	0	0	29	24	0	0	31	27	merge_repeat		chromOut		nested
chr6	60506309	T	C	999	11 11 11 11 11 11 11 11	37	0	0	36	30	0	0	28	32	0	0	20	17	0	0	32	21	0	0	31	16	0	0	27	16	0	0	30	24	0	0	29	27	merge_repeat		chromOut		nested
chr6	60731530	T	C	999	11 11 11 11 11 11 11 11	48	0	0	37	23	0	0	32	28	0	0	38	29	0	0	34	31	0	0	31	32	0	0	28	20	0	0	27	23	0	0	33	15
chr6	61492733	T	C	999	11 11 11 11 11 11 11 11	48	0	0	31	35	0	0	29	33	0	0	28	41	0	0	29	37	0	0	28	26	0	0	25	33	0	0	21	27	0	0	21	47
chr6	63393394	T	A	999	11 11 11 11 11 11 11 11	48	0	0	37	47	0	0	51	29	0	0	32	33	0	0	42	34	0	0	33	30	0	0	25	25	0	0	31	25	0	0	28	20	merge_repeat		chromOut
chr6	64623513	C	G	999	11 11 11 11 11 11 11 11	47	0	0	25	31	0	0	26	28	0	0	36	30	0	0	26	34	0	0	25	22	0	0	24	24	0	0	32	27	0	0	30	31
chr6	66016967	A	G	999	11 11 11 11 11 11 11 11	43	0	0	25	25	0	0	32	27	0	0	33	25	0	0	31	23	0	0	31	22	0	0	27	25	0	0	24	26	0	0	22	21
chr6	66735620	A	G	999	11 11 11 11 11 11 11 11	39	0	0	24	24	0	0	23	36	0	0	29	32	0	0	25	26	0	0	16	26	0	0	9	30	0	0	30	38	0	0	22	27	merge_repeat		chromOut		nested
chr6	68711305	A	T	999	11 11 11 11 11 11 11 11	43	0	0	36	26	0	0	27	25	0	0	20	25	0	0	25	34	0	0	24	19	0	0	27	29	0	0	26	35	0	0	24	30	merge_repeat					segmentDup
chr6	68970314	C	T	999	11 11 11 11 11 11 11 11	39	0	0	31	37	0	0	31	26	0	0	26	32	0	0	20	42	0	0	21	34	0	0	20	33	0	0	15	24	0	0	20	21	merge_repeat					segmentDup
chr6	70939409	T	C	999	11 11 11 11 11 11 11 11	21	0	0	6	18	0	0	16	17	0	0	14	7	0	0	13	28	0	0	11	24	0	0	15	22	0	0	13	15	0	0	14	14
chr6	70939417	G	A	999	11 11 11 11 11 11 11 11	22	0	0	12	20	0	0	19	20	0	0	15	7	0	0	18	30	0	0	17	26	0	0	15	20	0	0	13	13	0	0	18	12
chr6	70939432	C	A	999	11 11 11 11 11 11 11 11	22	0	0	12	17	0	0	17	19	0	0	14	8	0	0	21	23	0	0	16	23	0	0	14	22	0	0	15	14	0	0	18	10
chr6	70939446	C	G	999	11 11 11 11 11 11 11 11	23	0	0	15	16	0	0	20	18	0	0	15	8	0	0	24	22	0	0	21	22	0	0	18	19	0	0	18	16	0	0	25	10
chr6	71134415	A	C	999	11 11 11 11 11 11 11 11	47	0	0	23	24	0	0	28	28	0	0	39	27	0	0	34	27	0	0	30	23	0	0	36	21	0	0	23	27	0	0	29	25
chr6	71134423	T	C	999	11 11 11 11 11 11 11 11	51	0	0	24	27	0	0	29	29	0	0	36	28	0	0	34	27	0	0	29	24	0	0	35	22	0	0	22	32	0	0	28	23
chr6	71134510	C	T	999	11 11 11 11 11 11 11 11	58	0	0	24	40	0	0	34	27	0	0	32	31	0	0	31	39	0	0	19	39	0	0	31	34	0	0	27	37	0	0	27	41
chr6	71828594	G	A	999	11 11 11 11 11 11 11 11	46	0	0	30	28	0	0	23	29	0	0	27	31	0	0	28	30	0	0	31	34	1	0	20	25	0	0	24	30	0	0	20	28	merge_repeat		chromOut		nested
chr6	72305981	G	C	999	11 11 11 11 11 11 11 11	24	0	0	9	18	0	0	13	22	0	0	20	25	0	0	15	13	0	0	21	18	0	0	15	17	0	0	18	16	0	0	5	19
chr6	72337181	C	A	999	11 11 11 11 11 11 11 11	23	0	0	13	12	0	1	12	15	0	0	14	16	0	1	10	17	0	0	15	8	0	0	17	12	0	0	14	17	0	0	11	16	merge_repeat		chromOut
chr6	74935566	C	A	999	11 11 11 11 11 11 11 11	34	0	0	19	30	0	0	26	16	0	0	24	19	0	0	22	23	0	0	18	19	0	0	23	29	0	0	20	14	0	0	17	17	merge_repeat		chromOut		nested
chr6	74983935	C	T	999	11 11 11 11 11 11 11 11	38	0	0	20	21	0	0	17	26	0	0	20	18	0	0	16	22	0	0	15	26	0	0	20	24	0	0	19	24	0	0	16	31	merge_repeat		chromOut
chr6	75342576	A	G	999	11 11 11 11 11 11 11 11	34	0	0	24	19	0	0	19	15	0	0	31	22	0	0	37	14	0	0	21	25	0	0	23	22	0	0	23	20	0	0	19	24	merge_repeat		chromOut
chr6	77304193	G	T	999	11 11 11 11 11 11 11 11	20	0	0	14	18	0	0	17	11	0	0	17	15	0	0	12	16	0	0	21	12	0	0	10	13	0	0	19	16	0	0	10	10	merge_repeat		chromOut
chr6	77745011	C	T	999	11 11 11 11 11 11 11 11	46	0	0	36	26	0	0	32	32	0	0	30	32	0	0	36	42	0	0	34	27	0	0	20	26	0	0	33	23	0	0	26	28	merge_repeat		chromOut
chr6	77906650	T	A	999	11 11 11 11 11 11 11 11	32	0	0	12	20	0	0	23	18	0	0	23	21	0	0	18	19	0	0	27	27	0	0	14	26	1	0	13	23	0	0	11	22	merge_repeat	trfMask	chromOut	simple
chr6	78132334	A	G	999	11 11 11 11 11 11 11 11	43	0	0	35	33	0	0	32	33	0	0	22	29	0	0	30	25	0	0	36	36	0	0	17	26	0	1	31	28	0	0	31	28	merge_repeat		chromOut		nested
chr6	80636093	A	C	999	11 11 11 11 11 11 11 11	40	0	0	34	17	0	0	23	17	0	0	32	24	0	0	33	22	0	0	26	18	0	0	26	17	0	0	39	24	0	0	26	20
chr6	80636096	A	C	999	11 11 11 11 11 11 11 11	40	0	0	33	15	0	0	22	18	0	0	32	24	0	0	31	22	0	0	26	18	0	0	25	17	0	0	39	24	0	0	25	19
chr6	80636097	A	C	999	11 11 11 11 11 11 11 11	40	0	0	34	15	0	0	22	18	0	0	32	24	0	0	30	22	0	0	26	18	0	0	26	17	0	0	39	24	0	0	25	19
chr6	83076794	A	G	999	11 11 11 11 11 11 11 11	28	0	0	20	17	0	0	18	17	0	0	15	18	0	0	14	16	0	0	19	12	0	0	22	11	0	0	14	14	0	0	23	21	merge_repeat		chromOut		nested
chr6	83076816	A	G	999	11 11 11 11 11 11 11 11	36	0	0	25	20	0	0	23	20	0	0	17	20	0	0	15	21	0	0	22	17	0	0	29	15	0	0	16	20	0	0	26	26	merge_repeat		chromOut		nested
chr6	83153684	C	G	999	11 11 11 11 11 11 11 11	36	0	0	20	21	0	0	26	27	0	0	16	22	0	0	31	29	0	0	34	31	0	0	15	21	0	0	21	20	0	0	27	15
chr6	83175358	C	T	999	11 11 11 11 11 11 11 11	29	0	0	15	27	0	0	16	35	0	0	7	22	0	0	18	34	0	0	20	32	0	0	19	23	0	0	14	26	0	0	18	20	merge_repeat		chromOut
chr6	83175373	T	G	999	11 11 11 11 11 11 11 11	32	0	0	15	32	0	0	19	34	0	0	8	24	0	0	14	37	0	0	17	34	0	0	18	25	0	0	14	27	0	0	20	23	merge_repeat		chromOut
chr6	83175423	A	G	999	11 11 11 11 11 11 11 11	38	0	0	14	29	0	0	12	30	0	0	10	28	0	0	19	38	0	0	20	32	0	0	15	26	0	0	11	27	0	0	19	26
chr6	83175429	A	G	999	11 11 11 11 11 11 11 11	40	0	0	15	29	0	0	13	32	0	0	12	29	0	0	19	41	0	0	19	34	0	0	15	26	0	0	13	27	0	0	19	27
chr6	83175467	G	T	999	11 11 11 11 11 11 11 11	37	0	0	16	26	0	0	14	29	0	0	17	27	0	0	19	38	0	0	19	32	0	0	20	30	0	0	12	25	0	0	25	24
chr6	83175470	A	T	999	11 11 11 11 11 11 11 11	37	0	0	16	26	0	0	14	28	0	0	17	27	0	0	20	37	0	0	19	32	0	0	20	30	0	0	12	25	0	0	25	23
chr6	83175476	A	T	999	11 11 11 11 11 11 11 11	38	0	0	15	23	0	0	15	27	0	0	20	26	0	0	18	35	0	0	20	31	0	0	19	31	0	0	14	24	0	0	25	22	merge_repeat		chromOut		nested
chr6	83175482	G	T	999	11 11 11 11 11 11 11 11	37	0	0	14	23	0	0	17	25	0	0	21	24	0	0	21	28	0	0	19	26	0	0	18	24	0	0	14	23	0	0	21	22	merge_repeat		chromOut		nested
chr6	83175486	G	A	999	11 11 11 11 11 11 11 11	37	0	0	14	24	0	0	17	26	0	0	21	24	0	0	23	28	0	0	19	26	0	0	18	24	0	0	14	23	0	0	21	23	merge_repeat		chromOut		nested
chr6	83175489	A	T	999	11 11 11 11 11 11 11 11	37	0	0	14	24	0	0	17	26	0	0	22	24	0	0	22	28	0	0	19	26	0	0	18	24	0	0	14	23	0	0	21	23	merge_repeat		chromOut		nested
chr6	83175500	A	G	999	11 11 11 11 11 11 11 11	39	0	0	15	24	0	0	20	23	0	0	24	20	0	0	28	28	0	0	22	26	0	0	22	20	0	0	19	23	0	0	23	23	merge_repeat		chromOut		nested
chr6	83175511	A	T	999	11 11 11 11 11 11 11 11	33	0	0	16	17	0	0	20	23	0	0	24	16	0	0	26	24	0	0	20	20	0	0	25	20	0	0	20	22	0	0	22	20	merge_repeat		chromOut		nested
chr6	83175515	G	T	999	11 11 11 11 11 11 11 11	34	0	0	17	17	0	0	20	24	0	0	25	16	0	0	26	25	0	0	22	20	0	0	24	20	0	0	20	22	0	0	23	20	merge_repeat	trfMask	chromOut	simple	nested
chr6	84042070	T	G	999	11 11 11 11 11 11 11 11	25	0	0	17	10	0	0	19	14	0	0	11	14	0	0	20	16	0	0	28	10	0	0	21	22	0	0	19	14	0	0	23	11	merge_repeat		chromOut		nested
chr6	84042072	T	A	999	11 11 11 11 11 11 11 11	29	0	0	17	12	0	0	19	14	0	0	12	17	0	0	20	19	0	0	28	11	0	0	21	23	0	0	19	14	0	0	23	10	merge_repeat		chromOut		nested
chr6	84042074	A	G	999	11 11 11 11 11 11 11 11	28	0	0	17	11	0	0	19	15	0	0	12	16	0	0	20	18	0	0	28	11	0	0	21	22	0	0	19	12	0	0	23	10	merge_repeat		chromOut		nested
chr6	84042077	A	C	999	11 11 11 11 11 11 11 11	30	0	0	17	13	0	0	20	15	0	0	12	18	0	0	20	19	0	0	28	12	0	0	21	24	0	0	18	16	0	0	23	13	merge_repeat		chromOut		nested
chr6	84326483	A	G	999	11 11 11 11 11 11 11 11	27	0	0	12	17	0	0	10	23	0	0	13	14	0	0	13	28	0	0	16	25	0	0	14	15	0	0	15	29	0	0	14	15	merge_repeat			simple
chr6	84326562	G	A	999	11 11 11 11 11 11 11 11	28	0	0	10	20	0	0	13	21	0	0	14	19	0	0	15	25	0	0	17	26	0	0	17	16	0	0	11	28	0	0	13	15	merge_repeat			simple
chr6	85196999	C	A	999	11 11 11 11 11 11 11 11	29	0	0	17	12	0	0	20	28	0	0	19	27	0	0	20	16	0	0	26	20	0	0	15	23	0	0	20	17	0	0	15	22
chr6	85197000	T	C	999	11 11 11 11 11 11 11 11	31	0	0	19	12	0	0	20	28	0	0	20	27	0	0	20	16	0	0	26	20	0	0	15	24	0	0	20	17	0	0	15	22
chr6	85197023	T	C	999	11 11 11 11 11 11 11 11	30	0	0	20	10	0	0	20	18	0	0	23	23	0	0	24	14	0	0	35	20	0	0	15	16	0	0	24	17	0	0	16	19
chr6	85197029	G	C	999	11 11 11 11 11 11 11 11	31	0	0	20	11	0	0	19	18	0	0	24	21	0	0	23	13	0	0	36	19	0	0	16	18	0	0	22	15	0	0	14	19
chr6	85197040	T	C	999	11 11 11 11 11 11 11 11	28	0	0	19	10	0	0	17	20	0	0	28	19	0	0	25	13	0	0	35	19	0	0	18	19	0	0	22	15	0	0	12	16
chr6	85197054	T	C	999	11 11 11 11 11 11 11 11	28	0	0	17	11	0	0	18	16	0	0	24	20	0	0	20	11	0	0	31	19	0	0	18	20	0	0	23	17	0	0	12	16
chr6	85197069	T	C	999	11 11 11 11 11 11 11 11	25	0	0	15	12	0	0	16	16	0	0	20	18	0	0	20	9	0	0	26	17	0	0	17	16	0	0	22	16	0	0	11	14
chr6	85197072	T	C	999	11 11 11 11 11 11 11 11	25	0	0	15	12	0	0	16	16	0	0	20	17	0	0	20	9	0	0	26	18	0	0	17	16	0	0	22	17	0	0	11	14
chr6	85197075	T	C	999	11 11 11 11 11 11 11 11	25	0	0	15	12	0	0	16	17	0	0	20	18	0	0	20	9	0	0	26	18	0	0	17	16	0	0	22	17	0	0	11	14
chr6	85197084	T	C	999	11 11 11 11 11 11 11 11	29	0	0	15	14	0	0	18	19	0	0	19	18	0	0	23	14	0	0	29	23	0	0	21	15	0	0	22	20	0	0	14	18
chr6	85480320	A	G	999	11 11 11 11 11 11 11 11	24	0	0	18	30	0	0	18	22	0	0	30	22	0	0	22	29	0	0	23	39	0	0	19	22	0	0	21	32	0	0	12	12	merge_repeat		chromOut
chr6	86324142	C	G	999	11 11 11 11 11 11 11 11	30	0	0	18	21	0	0	21	28	0	0	7	29	0	0	10	20	0	0	14	29	0	0	24	22	0	0	17	28	0	0	13	22
chr6	86324143	G	C	999	11 11 11 11 11 11 11 11	30	0	0	18	21	0	0	21	30	0	0	7	29	0	0	10	20	0	0	14	29	0	0	24	22	0	0	17	27	0	0	13	22
chr6	86783915	T	C	999	11 11 11 11 11 11 11 11	29	0	0	20	17	0	0	34	20	0	0	27	14	0	0	28	18	0	0	23	19	0	0	27	12	0	0	20	9	0	0	19	21	merge_repeat		chromOut		nested
chr6	88945903	C	T	999	11 11 11 11 11 11 11 11	44	0	0	23	22	0	0	31	24	0	0	20	24	0	0	27	22	0	0	32	27	0	0	25	25	0	0	16	30	0	0	21	27	merge_repeat		chromOut		nested
chr6	89755758	T	C	999	11 11 11 11 11 11 11 11	21	0	0	6	15	0	0	9	17	0	0	5	18	0	0	9	16	0	0	11	17	0	0	6	25	0	0	6	15	0	1	7	18	merge_repeat		chromOut		nested
chr6	89755763	C	T	999	11 11 11 11 11 11 11 11	21	0	0	6	16	0	0	9	17	0	0	5	18	0	0	9	16	0	0	9	17	0	0	7	25	0	0	6	15	0	0	8	18	merge_repeat		chromOut		nested
chr6	89755818	C	G	999	11 11 11 11 11 11 11 11	25	0	0	14	16	0	0	10	26	0	0	9	22	0	0	16	22	0	0	13	16	0	0	13	22	0	0	10	22	0	0	8	17	merge_repeat		chromOut		nested
chr6	89790689	G	A	999	11 11 11 11 11 11 11 11	34	0	0	20	14	0	0	21	21	0	0	16	29	0	0	25	20	0	0	16	30	0	0	19	20	0	0	13	26	0	0	15	24
chr6	89790691	C	T	999	11 11 11 11 11 11 11 11	34	0	0	20	14	0	0	21	21	0	0	16	31	0	0	25	21	0	0	16	31	0	0	19	20	0	0	13	26	0	0	15	23
chr6	89790722	C	T	999	11 11 11 11 11 11 11 11	34	0	0	22	24	0	0	23	22	0	0	17	27	0	0	25	20	0	1	16	32	0	0	20	22	0	0	9	25	0	0	12	24
chr6	89790739	T	A	999	11 11 11 11 11 11 11 11	31	0	0	24	24	0	0	28	21	0	0	16	23	0	0	25	20	0	0	14	28	0	0	20	23	0	0	5	26	0	0	14	23
chr6	89835464	T	C	999	11 11 11 11 11 11 11 11	21	0	0	6	15	0	0	9	17	0	0	13	19	0	0	8	17	0	0	11	16	0	0	7	19	0	0	7	20	0	0	8	17
chr6	90002623	T	A	999	11 11 11 11 11 11 11 11	21	0	0	21	16	0	0	18	20	0	0	5	16	0	0	25	17	0	0	24	13	0	0	20	12	0	0	20	12	0	0	16	22	merge_repeat		chromOut
chr6	91584605	A	G	999	11 11 11 11 11 11 11 11	37	0	0	27	18	0	0	29	23	0	0	26	17	0	0	34	26	0	0	20	17	0	0	25	20	0	0	28	21	0	0	32	15
chr6	91771654	A	G	999	11 11 11 11 11 11 11 11	37	0	0	29	15	0	0	27	27	0	0	30	14	0	0	30	14	0	0	31	17	0	0	27	22	0	0	29	11	0	0	23	14
chr6	91775036	T	G	999	11 11 11 11 11 11 11 11	52	0	0	42	21	0	0	18	37	0	0	24	28	0	0	20	37	0	0	35	36	0	0	30	28	0	0	26	26	0	0	25	32
chr6	92553069	G	A	999	11 11 11 11 11 11 11 11	48	0	0	29	21	0	0	19	32	0	1	19	35	0	0	33	28	0	0	29	34	0	0	24	27	0	0	25	23	0	0	26	36	merge_repeat		chromOut	simple
chr6	92645041	T	C	999	11 11 11 11 11 11 11 11	47	0	0	26	21	0	0	39	28	0	0	41	25	0	0	51	28	0	0	32	22	0	0	32	18	0	0	36	33	0	0	36	32	merge_repeat		chromOut
chr6	94349126	A	C	999	11 11 11 11 11 11 11 11	22	0	0	24	7	0	0	24	6	0	1	23	7	0	1	23	6	0	0	28	10	0	0	25	5	0	1	26	4	0	1	17	4	merge_repeat		chromOut		nested
chr6	95225972	C	G	999	11 11 11 11 11 11 11 11	31	0	0	13	18	0	0	26	19	0	0	18	30	0	0	17	27	0	0	21	27	0	0	19	21	0	0	24	24	0	0	12	23
chr6	98045652	T	A	999	11 11 11 11 11 11 11 11	51	0	0	31	24	0	0	39	29	0	0	37	17	0	0	40	26	0	0	37	28	0	0	34	21	0	0	31	20	0	0	30	21
chr6	99992710	A	G	999	11 11 11 11 11 11 11 11	21	0	0	12	14	0	0	9	15	0	0	12	13	0	0	15	14	0	0	13	21	0	0	14	11	0	0	13	13	0	0	9	12
chr6	102068956	A	T	999	11 11 11 11 11 11 11 11	58	0	0	30	28	0	0	28	42	0	0	32	35	0	0	26	38	0	0	33	30	0	0	31	32	0	0	34	43	0	0	24	46	merge_repeat		chromOut		nested
chr6	102553790	T	C	999	11 11 11 11 11 11 11 11	43	0	0	36	28	0	0	32	31	0	0	23	26	0	0	30	26	0	0	23	28	0	0	25	27	0	0	23	20	0	0	16	28	merge_repeat		chromOut		nested
chr6	102553862	T	C	999	11 11 11 11 11 11 11 11	23	0	0	25	14	0	0	19	15	0	0	25	15	0	0	27	10	0	0	20	14	0	0	20	12	0	0	21	11	0	0	10	13	merge_repeat		chromOut		nested
chr6	104195577	A	G	999	11 11 11 11 11 11 11 11	26	0	0	5	21	0	0	14	19	0	0	10	25	0	0	11	19	0	0	10	23	0	0	6	25	0	0	10	25	0	0	15	20	merge_repeat		chromOut
chr6	104833324	C	A	999	11 11 11 11 11 11 11 11	28	0	0	25	20	0	0	27	17	0	0	32	20	0	0	35	15	0	0	25	24	0	0	16	12	0	0	33	14	0	0	18	16	merge_repeat		chromOut	simple
chr6	104925248	A	C	999	11 11 11 11 11 11 11 11	34	0	0	23	14	0	0	24	22	0	0	20	14	0	0	27	38	0	0	18	34	0	0	25	19	0	0	23	17	0	0	36	15
chr6	105584047	C	A	999	11 11 11 11 11 11 11 11	37	0	0	23	14	0	0	29	12	0	0	32	18	0	0	27	17	0	0	24	19	0	0	24	13	0	0	39	16	0	0	28	15	merge_repeat		chromOut		nested
chr6	108903674	A	G	999	11 11 11 11 11 11 11 11	57	0	0	21	39	0	0	33	27	0	0	21	40	0	0	32	29	0	0	25	40	0	0	29	28	0	0	36	28	0	0	22	38
chr6	109849230	C	A	999	11 11 11 11 11 11 11 11	34	0	0	11	23	0	0	20	33	0	0	15	37	0	0	12	37	0	0	15	20	0	0	11	25	0	0	16	22	0	0	12	27	merge_repeat		chromOut		nested
chr6	109849231	A	G	999	11 11 11 11 11 11 11 11	34	0	0	11	23	0	0	20	33	0	0	15	37	0	0	12	37	0	0	15	20	0	0	11	25	0	0	16	22	0	0	12	27	merge_repeat		chromOut		nested
chr6	109852161	T	C	999	11 11 11 11 11 11 11 11	32	0	0	21	16	0	0	22	28	0	0	22	21	0	0	20	21	0	0	13	19	0	0	17	22	0	0	24	15	0	0	17	17	merge_repeat		chromOut		nested
chr6	109852171	G	C	999	11 11 11 11 11 11 11 11	34	0	0	23	18	0	0	24	24	0	0	21	20	0	0	23	20	0	0	13	21	0	0	19	23	0	0	24	18	0	0	18	17	merge_repeat		chromOut		nested
chr6	110740281	G	C	999	11 11 11 11 11 11 11 11	42	0	0	24	18	0	0	23	31	0	0	26	26	0	0	38	22	0	0	24	35	0	0	28	28	0	0	33	38	0	0	27	27	merge_repeat		chromOut
chr6	110803920	T	A	999	11 11 11 11 11 11 11 11	27	0	0	6	21	0	0	9	19	0	1	7	30	0	0	9	23	0	1	6	24	0	0	8	25	0	0	5	28	0	0	4	24
chr6	111489450	T	G	999	11 11 11 11 11 11 11 11	46	0	0	40	26	0	0	23	35	0	0	43	28	0	0	28	27	0	0	31	27	0	0	23	23	0	0	41	24	0	0	32	26
chr6	111489451	T	A	999	11 11 11 11 11 11 11 11	46	0	0	40	26	0	0	23	34	0	0	43	28	0	0	28	27	0	0	31	27	0	0	23	23	0	0	41	24	0	0	32	26
chr6	112460648	G	A	999	11 11 11 11 11 11 11 11	34	0	0	27	22	0	0	28	37	0	0	18	25	0	0	28	23	0	0	25	29	0	0	11	28	0	0	22	32	0	0	14	20
chr6	112996180	G	T	999	11 11 11 11 11 11 11 11	33	0	0	19	16	0	0	12	37	0	0	17	21	0	0	25	32	0	0	24	24	0	0	12	33	0	0	19	20	0	0	11	22
chr6	113201715	C	A	999	11 11 11 11 11 11 11 11	32	0	0	26	29	0	1	24	29	0	0	13	19	0	0	19	24	0	0	25	17	0	0	15	23	0	2	32	31	0	0	20	24	merge_repeat	trfMask	chromOut	simple	nested
chr6	113846717	T	C	999	11 11 11 11 11 11 11 11	41	0	0	19	22	0	0	17	33	0	0	31	33	0	0	25	27	0	0	23	29	0	0	19	22	0	0	30	30	0	0	13	34	merge_repeat		chromOut		nested
chr6	113922981	C	T	999	11 11 11 11 11 11 11 11	32	1	0	15	24	0	0	20	16	0	0	12	22	0	0	10	23	0	0	26	28	0	0	14	19	0	0	17	23	0	0	15	17	merge_repeat		chromOut		nested
chr6	114082050	C	A	999	11 11 11 11 11 11 11 11	49	0	0	35	32	0	0	29	33	0	0	37	34	0	0	32	41	0	0	37	31	0	0	27	22	0	0	39	37	0	0	36	30	merge_repeat		chromOut
chr6	114694924	G	T	999	11 11 11 11 11 11 11 11	38	0	0	15	27	0	1	35	21	0	0	31	31	0	0	26	27	0	0	29	28	0	0	24	17	0	0	30	21	0	0	21	17	merge_repeat		chromOut
chr6	114694926	A	G	999	11 11 11 11 11 11 11 11	38	0	0	15	27	0	1	34	21	0	0	31	31	0	0	26	27	0	0	29	28	0	0	23	17	0	0	30	21	0	0	21	17	merge_repeat		chromOut
chr6	116973216	T	C	999	11 11 11 11 11 11 11 11	41	0	0	24	17	0	0	18	32	0	0	29	33	0	0	30	25	0	0	34	33	0	0	23	27	0	0	28	29	0	0	31	25	merge_repeat		chromOut		nested
chr6	117480394	A	G	999	11 11 11 11 11 11 11 11	43	0	0	23	34	0	0	28	34	0	0	24	19	0	0	31	28	0	0	24	33	0	0	36	33	0	0	19	29	0	0	28	31
chr6	119453965	T	C	999	11 11 11 11 11 11 11 11	62	0	0	28	60	0	0	35	43	0	0	35	35	0	0	20	42	0	0	24	48	0	0	43	42	0	0	29	43	0	0	31	37	merge_repeat		chromOut	simple	nested
chr6	119504427	T	G	999	11 11 11 11 11 11 11 11	26	0	0	40	15	0	0	23	17	0	0	30	16	0	0	32	23	0	0	29	21	0	0	14	12	0	0	29	22	0	0	25	21	merge_repeat		chromOut
chr6	120136085	T	A	999	11 11 11 11 11 11 11 11	63	0	0	33	41	0	0	40	30	0	0	47	42	0	0	31	43	0	0	40	42	0	0	34	48	0	0	40	50	0	0	27	36	merge_repeat	trfMask	chromOut	simple
chr6	120459456	A	G	999	11 11 11 11 11 11 11 11	32	0	0	31	23	0	0	33	33	0	0	31	30	0	0	40	30	0	0	36	48	0	0	37	25	0	0	42	32	0	0	14	18
chr6	120459529	C	G	999	11 11 11 11 11 11 11 11	42	0	0	35	21	0	0	38	19	0	0	36	21	0	0	34	28	0	0	35	33	0	0	38	12	0	0	41	29	0	0	29	13
chr6	120549725	G	C	999	11 11 11 11 11 11 11 11	20	0	0	8	12	0	0	12	13	0	0	17	13	0	0	18	18	0	0	11	21	0	0	14	13	0	0	16	18	0	0	6	14
chr6	120577427	A	C	999	11 11 11 11 11 11 11 11	21	0	0	20	15	0	0	15	22	0	0	24	24	0	0	20	19	0	0	34	23	0	0	11	10	0	0	21	11	0	0	21	14
chr6	120613812	G	T	999	11 11 11 11 11 11 11 11	21	0	0	10	19	0	0	11	10	0	0	18	16	1	0	15	16	0	0	12	12	0	0	16	9	0	0	19	12	0	0	6	17	merge_repeat		chromOut
chr6	120666562	T	C	999	11 11 11 11 11 11 11 11	20	0	0	9	11	0	0	9	19	0	0	8	26	0	0	8	28	0	0	14	15	0	0	8	21	0	0	8	16	0	0	6	18	merge_repeat		chromOut
chr6	120675976	C	T	999	11 11 11 11 11 11 11 11	40	0	0	25	18	0	1	26	16	0	0	24	16	0	0	27	16	0	0	31	19	0	0	27	23	0	0	29	19	0	0	28	18	merge_repeat		chromOut
chr6	120688124	C	A	999	11 11 11 11 11 11 11 11	33	0	0	16	32	0	0	22	31	0	0	16	17	0	0	14	24	0	0	12	25	0	0	15	23	0	0	14	33	0	0	18	39
chr6	120688125	A	G	999	11 11 11 11 11 11 11 11	33	0	0	16	32	0	0	22	31	0	0	16	17	0	0	14	23	0	0	12	25	0	0	15	23	0	0	14	33	0	0	18	39
chr6	120748476	T	C	999	11 11 11 11 11 11 11 11	60	0	0	35	33	0	0	29	36	0	0	33	28	0	0	36	32	0	0	31	31	0	0	25	35	0	0	46	30	0	0	34	27	merge_repeat		chromOut
chr6	120852880	C	G	999	11 11 11 11 11 11 11 11	34	0	0	20	21	0	0	20	29	0	0	13	23	0	0	15	26	0	0	23	22	0	0	21	21	0	0	15	19	0	0	11	32	merge_repeat				nested
chr6	120852884	C	G	999	11 11 11 11 11 11 11 11	35	0	0	19	21	0	0	19	30	0	0	13	22	0	0	15	26	0	0	21	22	0	0	20	21	0	0	14	21	0	0	10	35	merge_repeat				nested
chr6	120853056	G	T	999	11 11 11 11 11 11 11 11	26	0	0	32	18	0	0	22	13	0	0	28	17	0	0	27	20	0	0	24	10	0	0	17	9	0	0	29	13	0	0	20	15
chr6	120853079	G	T	999	11 11 11 11 11 11 11 11	34	0	0	30	19	0	0	20	14	0	0	26	16	0	0	27	18	0	0	29	18	0	0	21	24	0	0	29	23	0	0	19	18	merge_repeat			simple
chr6	120905615	G	C	999	11 11 11 11 11 11 11 11	53	0	0	29	37	0	0	20	41	0	0	40	36	0	0	31	41	0	0	27	36	0	0	26	27	0	0	36	31	0	0	27	28
chr6	120971309	G	T	999	11 11 11 11 11 11 11 11	48	0	0	26	26	0	0	42	38	0	0	25	34	0	0	32	31	0	0	37	25	0	0	35	40	0	0	23	25	0	0	35	24	merge_repeat	trfMask	chromOut	simple	nested
chr6	120973101	G	T	999	11 11 11 11 11 11 11 11	40	1	0	19	21	1	0	13	26	0	0	15	30	1	0	19	30	0	0	26	31	0	0	14	26	0	0	20	24	0	0	22	22	merge_repeat	trfMask	chromOut	simple
chr6	121055392	A	C	999	11 11 11 11 11 11 11 11	28	0	0	26	15	0	0	28	11	0	0	21	7	0	0	28	8	0	0	32	11	0	0	26	16	0	0	19	18	0	0	26	11
chr6	121055442	A	C	999	11 11 11 11 11 11 11 11	20	0	0	17	6	0	0	21	4	0	0	21	3	0	0	23	9	0	0	22	4	0	0	18	8	0	0	15	7	0	0	14	6
chr6	121055447	A	C	999	11 11 11 11 11 11 11 11	25	0	0	17	8	0	0	22	3	0	0	22	6	0	0	24	12	0	0	22	7	0	0	19	10	0	0	15	11	0	0	18	7
chr6	121055451	G	C	999	11 11 11 11 11 11 11 11	27	0	0	17	11	0	0	23	6	0	0	22	8	0	0	24	16	0	0	22	8	0	0	19	14	0	0	16	14	0	0	18	9	merge_repeat			simple
chr6	121147381	G	C	999	11 11 11 11 11 11 11 11	40	0	0	43	23	0	0	26	30	0	0	28	29	0	0	28	39	0	0	31	41	0	0	20	20	0	0	36	22	0	0	29	33	merge_repeat		chromOut
chr6	121148658	G	A	999	11 11 11 11 11 11 11 11	23	0	0	8	19	0	0	8	16	0	0	8	25	0	0	12	26	0	0	12	25	0	0	9	19	0	0	6	17	0	0	10	25	merge_repeat		chromOut
chr6	121151468	G	C	999	11 11 11 11 11 11 11 11	46	0	0	25	38	0	0	32	39	0	0	24	32	0	0	39	35	0	0	38	28	0	0	33	36	0	0	39	28	0	0	16	30	merge_repeat		chromOut		nested
chr6	122553476	A	C	999	11 11 11 11 11 11 11 11	34	0	0	17	27	0	0	26	23	0	0	24	17	0	0	21	31	0	0	14	24	0	0	11	23	0	0	18	27	0	0	8	29	merge_repeat		chromOut
chr6	124644763	C	A	999	11 11 11 11 11 11 11 11	37	0	0	19	18	0	0	22	43	0	0	32	24	0	0	30	26	0	0	20	35	0	0	16	26	0	0	27	33	0	0	29	27	merge_repeat		chromOut			segmentDup
chr6	126513129	A	G	999	11 11 11 11 11 11 11 11	46	0	0	35	26	0	0	36	32	0	0	34	47	0	0	37	31	0	0	25	34	0	0	37	26	0	0	26	36	0	0	16	30
chr6	126586326	A	C	999	11 11 11 11 11 11 11 11	31	0	0	17	20	0	0	20	16	0	0	20	21	0	0	27	26	0	0	29	27	0	0	23	15	0	0	25	15	0	0	16	15
chr6	126586331	A	C	999	11 11 11 11 11 11 11 11	31	0	0	17	20	0	0	22	16	0	0	21	21	0	0	26	29	0	0	27	28	0	0	23	15	0	0	22	16	0	0	16	15
chr6	126602592	C	G	999	11 11 11 11 11 11 11 11	27	0	0	17	14	0	0	27	17	0	0	24	9	0	0	20	8	0	0	25	15	0	0	25	15	0	0	20	9	0	0	17	10
chr6	126677921	G	T	999	11 11 11 11 11 11 11 11	54	0	0	29	44	0	0	41	34	0	0	39	34	0	0	46	27	0	0	35	33	0	0	35	41	0	0	30	24	0	0	34	39
chr6	126707610	C	A	999	11 11 11 11 11 11 11 11	41	0	0	22	19	0	0	29	19	0	0	35	28	0	0	39	20	0	0	26	20	0	0	27	18	0	0	27	27	0	0	28	31
chr6	128755408	G	A	999	11 11 11 11 11 11 11 11	46	0	0	38	27	0	0	29	22	0	0	25	33	0	0	21	29	0	0	30	33	0	0	22	28	0	0	22	24	0	0	24	36	merge_repeat					segmentDup
chr6	130071197	T	G	999	11 11 11 11 11 11 11 11	39	0	0	23	22	0	0	18	24	0	0	19	27	0	0	29	21	0	0	24	38	0	0	21	18	0	0	22	26	0	0	18	27	merge_repeat		chromOut			segmentDup
chr6	133887119	G	C	999	11 11 11 11 11 11 11 11	20	0	0	16	6	0	0	9	11	0	0	13	8	0	0	15	19	0	0	14	9	0	0	12	15	0	0	14	11	0	0	15	8	merge_repeat	trfMask	chromOut	simple
chr6	133887131	G	C	999	11 11 11 11 11 11 11 11	21	0	0	16	7	0	0	11	10	0	1	14	9	0	0	22	19	0	0	18	9	0	0	14	10	0	1	17	12	0	0	20	10	merge_repeat	trfMask	chromOut	simple
chr6	133924660	C	A	999	11 11 11 11 11 11 11 11	43	0	0	18	25	0	0	36	21	0	0	40	29	0	0	29	23	0	0	38	19	0	0	21	29	0	0	35	30	0	0	30	18	merge_repeat		chromOut		nested
chr6	133924698	T	C	999	11 11 11 11 11 11 11 11	30	0	0	18	12	0	1	34	20	0	0	33	19	0	0	31	19	0	0	33	21	0	0	17	29	0	2	25	24	0	0	26	19	merge_repeat		chromOut		nested
chr6	133926205	A	G	999	11 11 11 11 11 11 11 11	25	0	0	20	9	0	0	15	17	0	0	16	18	0	0	14	11	0	0	13	21	0	1	14	16	0	0	13	13	0	0	11	15	merge_repeat		chromOut		nested
chr6	133926904	C	T	999	11 11 11 11 11 11 11 11	28	0	0	17	40	1	0	8	35	0	0	14	31	0	0	11	33	0	0	9	32	0	0	11	27	0	0	15	21	0	0	10	18	merge_repeat		chromOut		nested
chr6	133927041	A	G	999	11 11 11 11 11 11 11 11	26	0	0	17	18	0	0	18	11	0	0	9	18	0	0	13	21	0	0	9	17	0	0	10	21	0	0	8	28	0	0	14	16	merge_repeat		chromOut		nested
chr6	133951184	G	C	999	11 11 11 11 11 11 11 11	21	0	0	7	18	0	0	9	21	0	0	7	25	0	0	7	19	0	0	7	21	0	0	4	19	0	0	2	19	0	0	9	19	merge_repeat		chromOut		nested
chr6	133951186	G	C	999	11 11 11 11 11 11 11 11	21	0	0	6	18	0	0	9	21	0	0	7	25	0	0	7	19	0	0	7	21	0	0	4	19	0	0	2	19	0	0	9	19	merge_repeat		chromOut		nested
chr6	133951198	G	C	999	11 11 11 11 11 11 11 11	23	0	0	10	18	0	0	10	21	0	0	9	24	0	0	6	18	0	0	8	22	0	0	6	22	0	0	5	18	0	0	10	21	merge_repeat		chromOut		nested
chr6	133951201	G	C	999	11 11 11 11 11 11 11 11	25	0	0	10	18	0	0	8	22	0	0	10	24	0	0	6	20	0	0	8	22	0	0	6	22	0	0	7	18	0	0	9	23	merge_repeat		chromOut		nested
chr6	134380955	T	A	999	11 11 11 11 11 11 11 11	53	0	0	20	36	0	0	24	29	0	0	24	30	0	0	38	31	0	0	42	26	0	0	30	23	0	0	26	30	0	0	33	30
chr6	135100492	A	T	999	11 11 11 11 11 11 11 11	34	0	0	20	15	0	0	21	25	0	0	22	17	0	1	14	19	0	0	33	12	0	0	20	16	0	0	22	23	0	0	26	16
chr6	136386822	A	G	999	11 11 11 11 11 11 11 11	20	0	0	13	7	0	0	16	12	0	0	24	8	0	0	29	10	0	1	27	11	0	1	21	7	0	0	21	6	1	1	18	5	merge_repeat		chromOut
chr6	140633939	G	T	999	11 11 11 11 11 11 11 11	52	0	0	30	35	0	0	30	33	0	0	25	31	0	0	26	32	0	0	31	38	0	0	23	29	0	0	21	32	0	0	33	33
chr6	141136455	G	A	999	11 11 11 11 11 11 11 11	30	0	0	12	21	0	0	19	24	0	0	13	34	0	0	18	27	0	0	23	32	0	0	22	39	0	0	17	30	0	0	16	14	merge_repeat		chromOut	simple	nested
chr6	141136523	G	A	999	11 11 11 11 11 11 11 11	41	0	0	24	29	0	0	30	22	0	0	24	32	0	0	22	26	0	0	32	29	0	0	30	33	0	0	22	35	0	0	23	18	merge_repeat		chromOut	simple
chr6	142750721	T	A	999	11 11 11 11 11 11 11 11	21	0	0	10	11	0	0	20	11	0	0	9	15	0	0	15	14	0	0	15	16	0	0	13	16	0	0	14	13	0	0	11	18	merge_repeat		chromOut	simple	nested
chr6	143574287	T	A	999	11 11 11 11 11 11 11 11	35	0	0	20	15	0	0	34	20	0	0	36	14	0	0	33	12	0	0	23	22	0	0	23	17	0	0	25	24	0	0	30	16	merge_repeat	trfMask	chromOut	simple
chr6	145913595	T	C	999	11 11 11 11 11 11 11 11	56	0	0	33	26	0	0	30	26	0	0	29	32	0	0	34	26	0	0	30	28	0	0	35	25	0	0	32	26	0	0	32	30
chr6	146016510	T	G	999	11 11 11 11 11 11 11 11	48	0	0	28	42	0	0	26	28	0	0	29	41	0	0	25	33	0	0	35	24	0	0	28	20	0	0	37	29	0	0	32	25	merge_repeat				nested
chr6	147771660	A	G	999	11 11 11 11 11 11 11 11	42	0	0	26	26	0	0	26	20	0	0	23	19	0	0	27	21	0	0	25	26	0	0	26	24	0	0	20	35	0	0	30	25
chr6	148357986	C	T	999	11 11 11 11 11 11 11 11	20	0	0	10	15	0	0	12	23	0	0	10	31	0	0	5	15	0	1	5	19	0	0	5	25	0	0	5	26	0	0	6	24
chr6	148573244	T	C	999	11 11 11 11 11 11 11 11	49	0	1	30	32	0	0	36	36	0	0	27	22	0	0	36	43	0	0	33	34	0	0	35	22	0	0	27	31	0	0	37	44	merge_repeat		chromOut		nested
chr6	148607037	A	G	999	11 11 11 11 11 11 11 11	48	0	0	34	35	0	0	26	31	0	0	26	23	0	0	37	28	0	0	42	32	0	0	22	26	0	0	43	25	0	0	30	23