chr position ref alt quality samtools_GT_RAW min_depth 1RF 1RR 1AF 1AR 2RF 2RR 2AF 2AR 3RF 3RR 3AF 3AR 4RF 4RR 4AF 4AR 5RF 5RR 5AF 5AR 6RF 6RR 6AF 6AR 7RF 7RR 7AF 7AR 8RF 8RR 8AF 8AR merge_repeat trfMask chromOut simple nested segmentDup
chr5 4475618 G T 999 11 11 11 11 11 11 11 11 28 0 0 11 19 0 0 13 21 0 0 12 16 0 0 10 22 0 0 14 19 1 0 7 20 0 0 12 17 0 0 10 27 @
chr5 4823788 G T 999 11 11 11 11 11 11 11 11 37 0 0 29 10 0 0 33 24 0 0 25 20 0 0 37 27 0 0 24 20 0 0 37 19 0 0 27 10 0 0 35 14 @
chr5 5027941 C G 999 11 11 11 11 11 11 11 11 42 0 0 41 30 0 0 34 33 0 0 22 20 0 0 46 44 0 0 37 26 0 0 33 28 0 0 27 22 0 0 24 24 merge_repeat chromOut
chr5 6068571 A C 999 11 11 11 11 11 11 11 11 32 0 0 17 21 0 0 21 27 0 0 21 25 0 0 16 44 0 0 14 34 0 0 20 20 0 0 18 24 0 0 15 17 merge_repeat trfMask chromOut simple
chr5 6068575 A C 999 11 11 11 11 11 11 11 11 31 0 0 17 22 0 0 21 29 0 0 21 26 0 0 17 45 0 0 15 34 0 0 21 20 0 0 17 24 0 0 15 16 merge_repeat trfMask chromOut simple
chr5 6370379 A C 999 11 11 11 11 11 11 11 11 34 0 0 13 26 0 0 16 18 0 0 17 24 0 0 19 18 0 0 17 18 0 0 16 18 0 0 22 17 0 0 17 17 merge_repeat chromOut
chr5 6475096 A T 999 11 11 11 11 11 11 11 11 34 0 0 19 15 0 0 23 24 0 0 20 29 0 0 23 29 1 0 26 34 0 0 26 28 0 0 19 18 0 0 22 26 merge_repeat chromOut
chr5 6796556 A G 999 11 11 11 11 11 11 11 11 58 0 0 51 32 0 0 30 41 0 0 40 34 1 0 28 29 0 0 35 42 0 0 37 28 0 0 39 27 0 0 40 34 @
chr5 7668857 A G 999 11 11 11 11 11 11 11 11 56 0 1 36 26 0 0 31 31 0 0 34 33 0 0 32 32 1 0 33 28 0 0 33 33 0 0 27 29 0 0 39 38 merge_repeat chromOut nested
chr5 8161179 T C 999 11 11 11 11 11 11 11 11 40 0 0 33 14 0 0 32 15 0 0 43 7 0 0 28 12 0 0 46 18 0 0 32 15 0 0 25 22 0 1 34 8 @
chr5 8317300 G T 999 11 11 11 11 11 11 11 11 21 0 0 14 14 0 0 7 14 0 0 14 13 0 0 12 11 0 0 21 25 0 0 8 16 0 0 12 20 0 0 10 19 merge_repeat trfMask chromOut simple
chr5 8979645 A C 999 11 11 11 11 11 11 11 11 36 0 0 31 20 0 0 29 16 0 0 39 23 0 0 30 25 0 0 32 15 0 0 17 23 0 0 33 20 0 0 20 16 merge_repeat trfMask chromOut simple
chr5 9144593 C T 999 11 11 11 11 11 11 11 11 57 0 0 29 37 0 0 32 28 0 0 25 32 0 0 26 33 0 0 30 31 0 0 26 33 0 0 41 39 0 0 34 46 merge_repeat chromOut nested
chr5 10032960 T A 999 11 11 11 11 11 11 11 11 47 0 0 32 42 0 0 27 20 0 0 40 40 0 0 33 31 0 0 45 35 0 0 35 25 0 0 26 30 0 0 34 39 @
chr5 10597258 C T 999 11 11 11 11 11 11 11 11 54 0 0 44 26 0 0 35 30 0 0 37 29 0 0 42 28 0 0 35 30 0 0 31 32 0 0 37 17 0 0 26 28 @
chr5 12083904 T A 999 11 11 11 11 11 11 11 11 57 0 0 36 31 0 0 40 37 0 0 32 34 0 0 41 34 0 0 35 40 0 0 39 32 0 0 28 29 0 0 37 27 merge_repeat chromOut nested
chr5 13525112 T G 999 11 11 11 11 11 11 11 11 44 0 0 31 23 0 0 29 22 0 0 25 23 0 0 32 25 0 0 19 25 0 0 29 29 0 0 20 28 0 0 30 31 @
chr5 13570208 A G 999 11 11 11 11 11 11 11 11 40 0 0 33 23 0 0 29 21 0 0 28 23 0 0 32 30 0 0 39 18 0 0 35 17 0 0 30 25 0 0 24 16 @
chr5 13976942 C A 999 11 11 11 11 11 11 11 11 26 0 0 15 26 0 0 15 22 0 0 23 18 0 0 23 19 0 0 19 21 0 0 15 17 0 0 15 17 0 0 15 11 merge_repeat chromOut
chr5 14601468 G T 999 11 11 11 11 11 11 11 11 30 0 0 26 15 1 0 30 18 0 0 17 13 0 1 29 23 0 1 26 21 0 0 24 14 0 0 32 15 0 0 25 14 merge_repeat trfMask chromOut simple
chr5 14915303 A G 999 11 11 11 11 11 11 11 11 528 2 2 137 414 2 0 138 476 3 2 129 509 3 0 152 420 1 1 130 435 2 4 94 428 4 2 127 420 1 1 119 462 merge_repeat segmentDup
chr5 14915687 T C,A 999 12 12 12 12 12 12 12 12 93 2 7 43 102 3 4 34 89 1 3 27 74 1 4 38 94 1 4 16 83 2 3 26 62 5 2 32 78 2 2 25 69 merge_repeat segmentDup
chr5 14917921 C T 691 11 11 11 11 11 11 11 11 225 7 0 206 17 5 0 204 16 5 1 221 18 7 0 253 16 10 0 285 11 8 0 240 15 2 0 210 20 6 0 200 25 merge_repeat chromOut nested segmentDup
chr5 14919363 T C 168 11 11 11 11 11 11 11 11 83 2 2 49 50 1 3 47 65 0 1 37 51 1 4 53 62 0 0 41 61 0 0 42 41 0 3 59 67 0 3 45 59 merge_repeat chromOut nested segmentDup
chr5 14919382 C T 158 11 11 11 11 11 11 11 11 59 0 0 36 27 0 1 40 35 0 1 36 34 0 2 47 32 0 0 41 32 0 1 38 20 1 0 49 46 0 0 36 36 merge_repeat chromOut nested segmentDup
chr5 14929104 A G 277 11 11 11 11 11 11 11 11 20 0 0 17 4 0 0 15 5 0 0 17 6 0 0 27 2 0 0 27 3 0 0 34 3 0 0 22 6 0 0 24 2 merge_repeat chromOut nested segmentDup
chr5 14929562 G A 438 11 11 11 11 11 11 11 11 81 0 2 4 108 0 2 16 93 0 1 5 95 0 0 5 116 0 0 3 92 0 1 5 75 0 1 5 89 0 1 10 121 merge_repeat chromOut nested segmentDup
chr5 14935965 A C 999 11 11 11 11 11 11 11 11 156 1 0 138 29 0 3 141 21 0 1 129 26 0 0 157 36 0 1 154 43 1 1 141 34 0 1 149 28 0 0 147 27 merge_repeat segmentDup
chr5 14942932 T C 394 11 11 11 11 11 11 11 11 57 0 0 50 21 0 0 39 18 1 0 45 29 0 0 53 24 0 0 47 22 0 0 42 22 2 0 61 20 0 0 52 35 merge_repeat chromOut nested segmentDup
chr5 14960078 T C 528 11 11 11 11 11 11 11 11 31 0 0 11 61 0 3 22 71 0 0 19 42 0 0 21 48 0 1 6 24 0 1 9 32 0 0 16 54 0 0 11 50 merge_repeat segmentDup
chr5 14963141 G C 999 11 11 11 11 11 11 11 11 157 0 1 160 107 0 1 154 107 0 1 82 105 1 1 96 110 0 1 75 94 0 0 79 78 0 0 120 96 0 0 118 90 merge_repeat segmentDup
chr5 14972241 A G 999 11 11 11 11 11 11 11 11 47 0 0 6 41 0 1 12 40 2 0 26 42 0 0 29 63 0 0 21 56 1 1 16 44 0 0 11 47 1 1 15 40 merge_repeat chromOut nested segmentDup
chr5 14983344 T C 999 11 11 11 11 11 11 11 11 103 0 0 82 51 0 0 61 50 0 0 69 40 0 0 54 58 0 0 62 51 0 1 49 53 0 0 71 44 0 0 61 43 merge_repeat chromOut nested segmentDup
chr5 14983363 C T 999 11 11 11 11 11 11 11 11 113 0 0 87 46 0 0 62 51 0 0 82 41 1 0 76 57 1 0 81 52 0 0 58 57 1 0 77 44 0 0 77 42 merge_repeat chromOut nested segmentDup
chr5 14984623 G A 999 11 11 11 11 11 11 11 11 87 0 0 54 51 1 0 69 52 0 0 66 46 0 0 59 42 0 0 53 45 0 2 55 30 0 0 57 47 0 0 62 55 merge_repeat chromOut nested segmentDup
chr5 14985317 T C 627 11 11 11 11 11 11 11 11 28 0 0 8 26 0 0 15 22 0 0 9 25 0 0 4 26 0 0 10 22 0 1 9 18 0 2 7 38 0 0 2 31 merge_repeat chromOut segmentDup
chr5 14985393 G A 59 11 11 11 11 11 11 11 11 40 0 1 33 8 0 0 33 15 0 0 42 6 0 1 36 3 0 1 48 3 0 0 49 10 0 1 36 14 0 0 38 8 merge_repeat chromOut segmentDup
chr5 14987007 T G 999 11 11 11 11 11 11 11 11 278 1 1 189 112 1 1 152 124 0 1 167 158 1 2 187 191 0 1 227 200 0 2 179 139 2 0 178 131 2 1 174 141 merge_repeat segmentDup
chr5 14987394 T A 999 11 11 11 11 11 11 11 11 115 1 1 14 130 0 0 14 116 0 0 15 136 0 1 15 165 0 1 19 157 0 0 13 102 0 0 20 143 0 0 18 114 merge_repeat segmentDup
chr5 14987466 T C 999 11 11 11 11 11 11 11 11 29 0 0 10 34 0 0 12 17 0 0 15 25 0 1 15 28 0 0 16 47 0 0 11 20 0 0 13 25 0 0 10 22 merge_repeat chromOut segmentDup
chr5 14987539 T G 942 11 11 11 11 11 11 11 11 22 0 1 12 17 0 0 20 15 0 0 7 16 0 0 10 12 0 0 9 21 0 0 9 14 0 0 6 16 0 0 17 12 merge_repeat chromOut segmentDup
chr5 14988102 C A 409 11 11 11 11 11 11 11 11 168 0 0 162 62 0 0 156 60 0 0 129 71 1 0 104 78 0 0 97 71 0 0 102 76 2 0 129 76 0 0 128 56 merge_repeat segmentDup
chr5 14990372 C G 497 11 11 11 11 11 11 11 11 103 3 3 47 89 5 1 38 76 1 3 30 103 3 2 26 105 0 2 31 129 1 4 13 85 2 3 32 103 3 1 38 90 merge_repeat segmentDup
chr5 15007839 G C 999 11 11 11 11 11 11 11 11 144 0 0 179 76 0 4 163 58 1 2 90 63 0 2 110 88 0 1 70 73 0 2 87 60 0 0 131 74 1 2 130 50 merge_repeat chromOut segmentDup
chr5 15035088 T C 263 11 11 11 11 11 11 11 11 95 0 0 78 26 0 0 75 20 0 0 92 18 0 0 113 15 0 0 90 26 0 0 94 25 1 0 88 29 0 0 104 18 merge_repeat segmentDup
chr5 15035097 G C 90 11 11 11 11 11 11 11 11 94 1 0 78 25 0 0 69 25 1 0 91 18 0 0 108 16 0 0 87 24 0 0 90 26 2 0 87 28 0 0 104 18 merge_repeat segmentDup
chr5 15038740 G A 588 11 11 11 11 11 11 11 11 145 1 2 104 65 0 1 129 31 0 0 110 45 0 0 114 49 0 0 100 45 0 0 101 47 0 2 112 44 0 1 107 46 merge_repeat chromOut nested segmentDup
chr5 15039206 T C 800 11 11 11 11 11 11 11 11 122 2 2 8 138 4 1 10 127 2 1 3 124 1 4 3 134 1 0 4 117 1 1 6 132 3 0 6 140 1 2 8 138 merge_repeat chromOut nested segmentDup
chr5 15039999 T G 999 11 11 11 11 11 11 11 11 36 0 0 27 9 0 0 40 10 0 0 51 11 0 0 67 5 0 0 63 8 0 0 56 4 0 1 29 12 0 0 48 21 merge_repeat chromOut segmentDup
chr5 15041122 T G 999 11 11 11 11 11 11 11 11 166 0 1 166 28 2 0 159 25 1 1 147 17 0 1 178 32 0 0 180 12 2 0 165 16 0 0 167 14 0 1 167 12 merge_repeat segmentDup
chr5 15042215 C A 999 11 11 11 11 11 11 11 11 131 0 0 49 99 0 0 67 99 0 0 65 87 1 0 44 101 0 0 55 85 0 0 40 91 0 0 50 82 0 0 48 91 merge_repeat segmentDup
chr5 15054003 A G 999 11 11 11 11 11 11 11 11 55 1 2 30 45 1 0 28 59 0 3 17 47 2 2 19 64 1 4 16 71 2 2 25 50 1 2 11 41 1 1 21 49 merge_repeat segmentDup
chr5 15479107 A G 255 11 11 11 11 11 11 11 11 120 1 1 42 103 2 1 49 113 3 1 23 131 1 1 30 126 3 2 14 120 2 0 16 110 2 0 22 96 0 0 28 103 merge_repeat chromOut nested segmentDup
chr5 15510380 T C 999 11 11 11 11 11 11 11 11 177 0 2 128 65 2 0 115 64 2 2 139 51 1 4 120 85 2 4 108 78 1 1 99 78 1 2 119 55 3 3 103 77 merge_repeat chromOut segmentDup
chr5 15572414 T G 999 11 11 11 11 11 11 11 11 33 0 0 24 30 0 0 18 18 0 0 17 16 0 0 17 24 0 0 20 22 0 0 16 25 0 0 17 28 0 0 23 22 merge_repeat segmentDup
chr5 15592089 C T 999 11 11 11 11 11 11 11 11 112 1 0 39 93 0 0 48 108 0 0 56 97 0 0 45 109 0 1 51 94 0 0 42 70 0 1 51 103 0 0 43 90 merge_repeat segmentDup
chr5 15592090 T A 999 11 11 11 11 11 11 11 11 112 1 0 39 93 0 0 48 108 0 0 55 97 0 0 45 108 0 1 51 94 0 0 42 70 0 1 51 103 0 0 43 90 merge_repeat segmentDup
chr5 15615765 T C 757 11 11 11 11 11 11 11 11 236 0 3 28 237 1 2 28 205 0 1 13 256 0 0 12 242 0 1 5 243 1 0 4 256 0 2 17 228 0 2 21 225 merge_repeat chromOut nested segmentDup
chr5 15624185 C T 62 11 11 11 11 11 11 11 11 20 0 0 2 26 0 0 4 35 0 1 3 25 0 0 5 22 1 0 3 27 0 0 1 19 0 0 1 20 0 0 2 34 merge_repeat segmentDup
chr5 15624284 T C 469 11 11 11 11 11 11 11 11 202 0 0 169 56 0 0 153 49 0 1 201 31 0 1 205 46 0 0 215 36 0 0 204 32 0 0 208 37 1 0 169 56 merge_repeat segmentDup
chr5 15629783 A G 999 11 11 11 11 11 11 11 11 85 0 0 68 53 0 0 59 58 0 0 55 40 0 0 48 37 0 0 33 67 0 0 42 47 0 0 52 56 0 0 50 48 merge_repeat segmentDup
chr5 15630652 G T 999 11 11 11 11 11 11 11 11 171 0 0 182 11 2 0 210 8 0 0 203 14 0 0 175 9 0 0 177 8 0 0 162 9 1 0 164 9 0 1 234 17 merge_repeat segmentDup
chr5 15641158 G A 535 11 11 11 11 11 11 11 11 43 0 0 39 13 1 0 32 14 0 0 32 11 0 0 47 17 0 0 40 10 0 0 35 13 0 0 38 14 0 0 39 7 merge_repeat segmentDup
chr5 15645496 C A 943 11 11 11 11 11 11 11 11 43 1 0 34 15 0 0 21 22 0 0 25 36 0 0 38 41 0 0 43 30 0 0 36 36 0 0 30 16 0 0 29 22 merge_repeat segmentDup
chr5 15647129 A C 810 11 11 11 11 11 11 11 11 32 0 0 12 25 0 0 7 25 0 0 15 28 0 0 16 20 0 0 10 26 0 0 19 34 0 0 14 24 0 2 14 30 merge_repeat chromOut segmentDup
chr5 15648961 C A 999 11 11 11 11 11 11 11 11 53 0 0 8 52 0 1 5 47 0 0 10 69 0 0 12 95 0 1 12 85 0 0 12 78 0 0 10 84 0 0 11 58 merge_repeat segmentDup
chr5 15649886 A T 378 11 11 11 11 11 11 11 11 104 2 0 40 94 1 1 34 80 1 0 20 86 2 1 37 74 0 2 31 79 2 3 21 78 0 1 37 94 0 0 29 86 merge_repeat chromOut segmentDup
chr5 15650214 T C 435 11 11 11 11 11 11 11 11 60 0 0 6 55 1 1 6 62 0 1 16 50 0 0 15 64 0 1 6 70 0 0 9 51 2 1 7 63 1 0 11 51 merge_repeat segmentDup
chr5 15655575 T G 611 11 11 11 11 11 11 11 11 248 2 2 38 230 0 2 56 235 1 2 42 234 0 0 44 236 0 0 38 224 1 1 40 208 0 2 40 206 0 2 45 214 merge_repeat segmentDup
chr5 15678240 A T 999 11 11 11 11 11 11 11 11 121 0 1 92 81 0 1 98 69 0 0 63 65 0 0 72 79 0 0 73 62 0 0 62 59 0 0 83 84 1 0 70 95 merge_repeat segmentDup
chr5 15704339 A C 335 11 11 11 11 11 11 11 11 26 1 0 31 9 0 0 25 9 0 0 19 7 0 0 39 5 0 1 32 5 0 0 35 6 0 0 26 11 0 0 26 5 merge_repeat chromOut segmentDup
chr5 15705283 G A 967 11 11 11 11 11 11 11 11 141 0 0 123 24 0 0 135 37 0 0 106 44 0 2 121 62 0 0 118 57 0 0 103 51 0 0 116 48 1 1 109 30 merge_repeat chromOut segmentDup
chr5 15705353 C T 999 11 11 11 11 11 11 11 11 84 1 0 79 4 0 0 85 8 0 0 101 6 0 0 121 13 0 0 113 8 0 1 111 10 0 0 76 10 0 0 78 6 merge_repeat chromOut segmentDup
chr5 15705431 T C 999 11 11 11 11 11 11 11 11 35 0 0 34 2 1 0 32 4 0 0 48 2 0 0 62 4 0 0 59 3 0 0 63 3 0 0 32 3 0 0 36 2 merge_repeat chromOut segmentDup
chr5 15707097 A T 253 11 11 11 11 11 11 11 11 120 2 3 44 93 2 0 56 62 3 2 51 83 0 1 50 89 2 0 59 90 2 1 42 83 3 1 49 70 2 1 59 71 merge_repeat chromOut segmentDup
chr5 15709081 A G 999 11 11 11 11 11 11 11 11 124 0 0 197 42 0 0 225 32 1 0 134 30 0 1 114 21 0 0 104 20 0 0 106 27 1 1 168 27 1 0 156 35 merge_repeat segmentDup
chr5 15709180 G A 249 11 11 11 11 11 11 11 11 63 0 0 57 8 0 0 52 12 0 0 54 13 0 0 63 17 0 0 75 16 0 0 56 8 1 0 55 7 0 0 54 12 merge_repeat segmentDup
chr5 15709195 A G 251 11 11 11 11 11 11 11 11 57 0 0 50 8 0 0 45 12 0 0 49 13 0 0 61 18 0 0 75 16 0 0 55 7 0 0 50 7 0 0 51 13 merge_repeat segmentDup
chr5 15712760 T G 548 11 11 11 11 11 11 11 11 121 0 1 30 123 1 1 35 129 1 1 20 132 0 2 16 118 0 0 14 149 1 0 17 103 1 2 26 124 0 0 20 140 merge_repeat segmentDup
chr5 15714331 A G 999 11 11 11 11 11 11 11 11 193 3 0 77 122 5 1 78 121 3 2 82 147 3 3 81 176 3 1 82 157 3 1 94 137 2 3 67 121 2 2 77 123 merge_repeat segmentDup
chr5 17088998 A G 999 11 11 11 11 11 11 11 11 25 0 0 16 9 0 0 28 7 0 0 28 11 0 0 30 6 0 0 23 4 0 0 23 10 0 0 30 10 0 0 26 10 merge_repeat chromOut
chr5 17089005 G T 999 11 11 11 11 11 11 11 11 22 0 0 16 6 0 0 26 5 0 0 29 8 0 0 33 7 0 0 23 4 0 0 22 6 0 0 29 7 0 0 25 7 merge_repeat chromOut
chr5 17299490 C A 999 11 11 11 11 11 11 11 11 26 0 0 16 24 0 0 14 16 0 0 14 23 0 0 23 28 0 0 13 27 0 0 16 20 0 0 11 15 0 1 18 25 merge_repeat chromOut nested
chr5 17299501 C A 999 11 11 11 11 11 11 11 11 32 0 0 16 28 0 0 17 20 0 0 15 22 0 0 22 26 0 0 14 23 0 0 16 23 0 0 14 18 0 0 19 27 merge_repeat chromOut nested
chr5 17451868 G T 999 11 11 11 11 11 11 11 11 62 0 0 34 29 0 0 40 27 0 0 42 33 0 0 52 30 0 0 49 35 0 0 44 29 0 0 42 20 0 0 43 22 @
chr5 17492620 G T 999 11 11 11 11 11 11 11 11 46 0 0 23 37 0 0 19 30 0 0 26 34 0 0 32 32 0 0 38 28 0 0 23 23 0 0 27 35 0 0 19 37 merge_repeat chromOut
chr5 18240584 A G 999 11 11 11 11 11 11 11 11 53 0 0 31 28 0 0 26 36 0 0 30 23 0 0 27 35 0 0 25 29 0 0 34 32 0 0 38 30 0 0 31 26 @
chr5 18240599 A G 999 11 11 11 11 11 11 11 11 51 0 0 30 32 0 0 27 34 0 0 33 23 0 0 23 35 0 0 24 30 0 0 34 30 0 0 43 31 0 0 30 21 @
chr5 18240641 T G 999 11 11 11 11 11 11 11 11 45 0 0 24 34 0 0 28 30 0 0 32 26 0 0 36 38 0 0 20 25 0 0 32 35 0 0 40 34 0 0 26 26 @
chr5 18240663 A G 999 11 11 11 11 11 11 11 11 44 0 0 24 31 0 0 28 29 0 0 32 26 0 0 37 36 0 0 18 26 0 0 27 31 0 0 37 34 0 0 29 26 @
chr5 19122639 C A 999 11 11 11 11 11 11 11 11 49 0 0 31 31 0 0 28 21 0 0 39 24 0 0 34 30 0 0 46 30 0 0 30 22 0 0 35 32 0 0 34 33 @
chr5 20869714 T G 999 11 11 11 11 11 11 11 11 34 0 0 18 24 0 0 15 19 0 0 21 22 0 0 25 30 0 0 40 30 0 0 20 21 0 0 19 23 0 0 23 14 merge_repeat chromOut simple
chr5 21058709 C G 999 11 11 11 11 11 11 11 11 53 0 0 33 28 0 0 45 27 0 0 37 32 0 0 44 32 0 0 35 18 0 0 38 29 0 0 51 30 0 0 34 39 @
chr5 21606879 G A 999 11 11 11 11 11 11 11 11 44 0 0 20 31 0 0 29 26 0 0 22 22 0 0 23 37 0 1 38 29 0 0 31 19 0 0 24 31 0 0 27 42 merge_repeat chromOut
chr5 21944034 A G 999 11 11 11 11 11 11 11 11 47 0 0 35 18 0 0 33 27 0 0 37 19 0 0 32 25 0 0 46 24 0 0 32 24 0 0 27 20 0 0 39 23 merge_repeat chromOut
chr5 25106645 G T 999 11 11 11 11 11 11 11 11 20 1 0 15 16 0 0 17 11 0 0 10 20 1 0 13 15 0 0 16 17 0 0 16 18 0 0 10 10 1 0 11 14 merge_repeat chromOut nested
chr5 25813288 T G 999 11 11 11 11 11 11 11 11 31 0 0 25 21 0 0 25 23 0 0 31 12 0 0 20 12 0 0 26 17 0 0 26 14 0 0 30 16 0 0 23 8 @
chr5 25843094 C G 999 11 11 11 11 11 11 11 11 35 0 0 27 25 0 0 18 21 0 0 29 33 0 0 32 17 0 0 23 35 0 0 14 27 0 0 17 18 0 0 24 27 merge_repeat chromOut nested
chr5 25843095 G C 999 11 11 11 11 11 11 11 11 35 0 0 27 25 0 0 18 21 0 0 29 33 0 0 32 17 0 0 23 35 0 0 15 27 0 0 17 18 0 0 24 27 merge_repeat chromOut nested
chr5 26098074 C T 596 11 11 11 11 11 11 11 11 20 0 0 18 2 0 0 28 6 0 0 18 4 0 0 25 6 0 0 29 7 0 0 25 7 0 0 15 5 0 0 15 7 merge_repeat segmentDup
chr5 30623399 T C 999 11 11 11 11 11 11 11 11 24 0 0 24 9 0 0 26 14 0 0 16 9 0 0 23 16 0 0 18 25 0 0 12 15 0 0 16 8 0 0 23 12 @
chr5 30664498 G T 999 11 11 11 11 11 11 11 11 38 0 0 19 37 0 0 16 27 0 0 16 29 1 0 18 19 0 0 24 19 0 0 25 23 0 0 21 27 0 0 27 17 @
chr5 30781104 T G 999 11 11 11 11 11 11 11 11 23 0 0 10 13 0 0 14 20 0 0 7 21 0 0 20 29 0 0 10 29 0 0 10 21 0 0 8 16 0 0 4 23 @
chr5 30881651 G A 999 11 11 11 11 11 11 11 11 42 0 0 17 30 0 0 18 40 0 0 33 26 0 0 24 27 0 0 14 28 0 0 20 28 0 0 18 24 0 0 30 26 @
chr5 30881658 C A 999 11 11 11 11 11 11 11 11 41 0 0 21 30 0 0 19 37 0 0 32 24 0 0 26 26 0 0 15 26 0 0 19 26 0 0 18 25 0 0 26 28 @
chr5 30881675 T A 999 11 11 11 11 11 11 11 11 42 0 0 20 26 0 0 19 27 0 0 32 22 0 0 23 27 0 0 19 23 0 0 24 31 0 0 18 30 0 0 29 18 @
chr5 30881710 C G 999 11 11 11 11 11 11 11 11 56 0 0 21 41 0 0 23 33 0 0 41 33 0 0 31 30 0 0 30 30 0 0 25 33 0 0 28 45 0 0 31 25 merge_repeat chromOut
chr5 30881712 C A 999 11 11 11 11 11 11 11 11 55 0 0 21 40 0 0 23 32 0 0 41 33 0 0 31 29 0 0 30 29 0 0 25 33 0 0 27 44 0 0 31 25 merge_repeat chromOut
chr5 30932184 C A 999 11 11 11 11 11 11 11 11 28 0 0 16 12 0 0 13 19 0 0 14 19 0 0 17 29 0 0 16 20 0 0 20 16 0 0 21 10 0 0 14 16 merge_repeat chromOut
chr5 32716317 C A 999 11 11 11 11 11 11 11 11 40 0 0 19 21 0 0 30 17 0 0 29 28 0 0 28 29 0 0 31 24 0 0 27 26 0 0 30 20 0 0 27 14 @
chr5 33504627 A T 999 11 11 11 11 11 11 11 11 23 0 0 12 13 0 0 16 8 0 0 22 5 0 0 14 17 0 0 10 18 0 0 8 21 0 0 15 8 0 0 13 13 @
chr5 33504647 T C 999 11 11 11 11 11 11 11 11 31 0 0 18 14 0 0 24 10 0 0 24 7 0 0 16 16 0 0 17 18 0 0 13 21 0 0 21 11 0 0 16 15 @
chr5 34041993 G C 999 11 11 11 11 11 11 11 11 20 0 0 14 15 0 0 21 16 0 0 23 9 0 0 10 13 0 0 14 12 0 0 19 10 0 0 14 6 0 0 22 4 merge_repeat chromOut
chr5 35466904 A T 999 11 11 11 11 11 11 11 11 28 0 0 21 17 0 0 15 14 0 0 19 15 0 0 27 30 0 0 27 24 0 0 13 15 0 0 19 14 0 0 23 13 merge_repeat trfMask chromOut simple
chr5 37602014 C T 999 11 11 11 11 11 11 11 11 32 0 0 17 31 0 0 12 20 0 0 21 17 0 0 22 29 0 0 24 19 0 0 24 18 0 0 25 18 0 0 20 17 merge_repeat chromOut
chr5 37602062 G T 999 11 11 11 11 11 11 11 11 21 0 0 16 27 0 0 7 15 0 0 14 14 0 0 10 11 0 0 14 15 0 0 16 15 0 0 14 16 0 0 12 19 merge_repeat trfMask chromOut simple
chr5 38260635 C A 999 11 11 11 11 11 11 11 11 52 0 0 31 23 0 1 34 21 0 0 30 29 0 0 29 45 0 0 25 37 0 0 27 25 0 0 28 35 0 0 37 22 @
chr5 38262310 C A 999 11 11 11 11 11 11 11 11 26 0 0 13 14 0 0 10 18 0 0 9 22 0 0 13 26 0 0 14 12 0 0 13 20 0 0 9 18 0 0 11 15 merge_repeat chromOut
chr5 38277285 C G 999 11 11 11 11 11 11 11 11 42 0 0 24 31 0 0 20 26 0 0 17 29 0 0 30 38 0 0 33 26 0 0 21 22 0 0 23 22 0 0 18 24 @
chr5 38300085 G C 999 11 11 11 11 11 11 11 11 46 0 0 30 35 0 0 21 25 0 0 34 30 0 0 26 39 0 0 31 38 0 0 23 27 0 0 22 32 0 0 27 31 @
chr5 38376779 G T 999 11 11 11 11 11 11 11 11 27 0 0 24 7 0 0 22 12 0 0 20 11 0 0 16 11 0 0 29 20 0 0 24 4 0 0 35 12 0 0 21 7 merge_repeat chromOut nested
chr5 38391012 C A 999 11 11 11 11 11 11 11 11 22 0 0 24 7 0 0 14 8 0 0 14 8 0 0 27 9 0 1 19 17 0 1 14 9 0 0 24 8 0 0 10 12 @
chr5 38500577 G C 999 11 11 11 11 11 11 11 11 52 0 0 24 28 0 0 32 26 0 0 27 27 0 0 40 36 0 0 32 29 0 0 41 25 0 0 36 24 0 0 36 30 @
chr5 38728900 A G 999 11 11 11 11 11 11 11 11 44 0 0 24 20 0 1 33 22 0 0 31 16 0 0 24 29 0 1 32 26 0 1 26 23 0 0 28 20 0 0 26 19 @
chr5 39611846 C T 999 11 11 11 11 11 11 11 11 40 0 0 29 17 0 0 22 41 0 0 22 26 0 0 20 20 0 0 33 25 0 0 26 19 0 0 24 28 0 0 33 28 @
chr5 40313917 T A 999 11 11 11 11 11 11 11 11 27 0 0 14 13 0 0 16 16 0 0 24 14 0 0 19 21 0 0 34 25 0 0 12 15 0 0 11 20 0 0 19 17 @
chr5 41953442 C A 999 11 11 11 11 11 11 11 11 42 0 0 26 28 1 0 23 19 0 0 23 19 1 0 29 28 0 0 25 31 0 0 28 26 2 0 29 38 1 1 31 31 @
chr5 42872599 G T 999 11 11 11 11 11 11 11 11 53 0 0 27 37 0 0 25 28 0 0 29 36 0 0 49 33 0 0 41 30 0 0 36 28 0 0 41 43 0 0 33 38 merge_repeat chromOut simple
chr5 43557921 T C 999 11 11 11 11 11 11 11 11 60 0 0 32 32 0 0 34 31 0 0 29 36 0 0 36 37 0 0 37 24 0 0 36 32 0 0 25 35 0 0 26 37 merge_repeat trfMask chromOut simple
chr5 44500991 A G 999 11 11 11 11 11 11 11 11 36 0 0 32 32 0 0 25 11 0 0 21 26 0 0 21 23 0 0 33 27 0 0 21 22 0 0 15 26 0 0 31 20 merge_repeat chromOut
chr5 46193132 T A 999 11 11 11 11 11 11 11 11 47 0 0 30 37 0 0 20 30 0 0 16 31 0 0 24 33 0 0 16 38 0 0 25 36 0 0 25 33 0 0 23 39 merge_repeat chromOut nested
chr5 46193224 T A 999 11 11 11 11 11 11 11 11 53 0 0 38 37 0 0 21 35 0 0 34 37 0 0 30 38 0 0 34 35 0 0 25 28 0 0 19 37 0 0 31 48 merge_repeat chromOut nested
chr5 47376663 A G 999 11 11 11 11 11 11 11 11 53 0 0 24 35 0 0 26 38 0 0 25 36 0 0 31 29 0 0 27 30 0 0 26 27 0 0 25 30 0 0 31 26 merge_repeat chromOut nested
chr5 47802361 G A 999 11 11 11 11 11 11 11 11 44 0 0 14 30 0 0 22 29 0 0 17 36 0 0 26 33 0 0 25 32 0 0 17 29 0 0 32 32 0 0 26 36 @
chr5 49110558 T C 999 11 11 11 11 11 11 11 11 64 0 0 31 41 0 0 28 36 0 0 37 34 0 0 42 25 0 0 41 35 0 0 38 32 0 0 30 41 0 0 43 34 @
chr5 49934786 G T 999 11 11 11 11 11 11 11 11 34 0 0 33 19 0 0 33 15 0 0 16 19 0 0 24 15 0 0 34 14 0 0 27 15 0 0 24 12 0 0 19 15 merge_repeat chromOut
chr5 50389015 T A 999 11 11 11 11 11 11 11 11 58 0 0 29 29 0 0 36 47 0 0 28 43 0 0 28 38 0 0 33 40 0 0 38 43 0 0 28 39 0 0 23 36 @
chr5 50612152 C T 999 11 11 11 11 11 11 11 11 71 0 0 39 48 0 0 41 33 0 0 32 39 0 0 32 40 0 0 36 40 1 0 44 44 0 0 39 44 0 0 45 34 merge_repeat nested
chr5 50953631 C G 999 11 11 11 11 11 11 11 11 49 0 0 19 30 0 0 19 37 0 0 16 35 0 0 31 20 0 0 28 23 0 0 20 36 0 0 15 35 0 0 23 36 merge_repeat chromOut nested
chr5 51545903 T C 999 11 11 11 11 11 11 11 11 38 0 0 24 25 0 0 31 24 0 0 32 22 0 0 28 33 0 0 38 17 0 0 32 28 0 0 24 14 0 0 18 22 @
chr5 52720692 C T 999 11 11 11 11 11 11 11 11 33 0 0 17 24 0 0 29 27 0 0 17 28 0 0 29 27 0 0 26 20 0 0 31 27 1 0 15 29 0 0 11 22 merge_repeat chromOut
chr5 52720725 C G 999 11 11 11 11 11 11 11 11 38 0 0 14 24 0 0 28 24 0 0 18 22 0 0 24 28 0 0 19 25 0 0 24 24 0 0 14 27 0 0 18 20 merge_repeat chromOut
chr5 52740952 G C 999 11 11 11 11 11 11 11 11 56 0 0 31 32 0 0 29 36 0 0 36 31 0 0 29 35 0 0 48 34 0 0 29 38 0 0 35 31 0 0 23 33 merge_repeat chromOut nested
chr5 53032157 T C 999 11 11 11 11 11 11 11 11 46 0 0 29 47 0 0 20 26 0 0 24 32 0 0 26 29 0 0 31 33 0 0 24 35 0 0 22 30 0 0 19 33 @
chr5 54940424 T A 999 11 11 11 11 11 11 11 11 44 0 0 31 30 0 0 32 33 0 0 37 26 0 0 32 26 0 0 19 25 0 0 22 37 0 0 30 31 0 0 22 39 merge_repeat chromOut nested
chr5 55323600 T C 999 11 11 11 11 11 11 11 11 35 0 0 17 30 0 0 13 32 0 0 16 29 0 0 14 27 0 0 16 37 0 0 9 26 0 0 10 27 0 0 15 27 merge_repeat nested
chr5 55323624 T C 999 11 11 11 11 11 11 11 11 32 0 0 15 26 0 0 13 30 0 0 10 22 0 0 17 23 0 0 15 33 0 0 10 26 0 0 10 23 0 0 15 26 merge_repeat nested
chr5 55536068 A G 999 11 11 11 11 11 11 11 11 58 0 0 33 41 0 0 52 30 0 0 34 46 0 0 26 40 0 0 35 29 0 0 32 26 0 0 27 38 0 0 27 38 @
chr5 55774848 C G 999 11 11 11 11 11 11 11 11 37 0 0 26 30 0 0 24 20 0 0 16 26 0 0 22 28 0 0 27 20 0 0 15 22 0 0 32 25 0 0 31 19 merge_repeat chromOut
chr5 57504570 C A 999 11 11 11 11 11 11 11 11 62 0 0 39 23 0 0 45 26 0 0 47 24 0 0 46 34 0 0 50 23 0 0 34 31 0 0 43 28 0 0 40 28 @
chr5 57504586 G T 999 11 11 11 11 11 11 11 11 59 0 0 35 24 0 0 42 22 0 0 42 22 0 0 42 28 0 0 48 21 0 0 36 28 0 0 45 30 0 0 46 24 @
chr5 57559426 A C 705 11 11 11 11 11 11 11 11 43 1 0 28 23 0 0 24 28 0 0 23 20 0 0 22 40 0 0 29 35 0 0 21 29 0 0 45 32 0 0 23 23 merge_repeat chromOut nested
chr5 57598562 A G 999 11 11 11 11 11 11 11 11 66 0 0 35 32 0 0 43 33 0 0 38 39 0 0 37 29 0 0 42 27 0 0 43 25 0 0 45 29 0 0 42 29 @
chr5 57661651 C G 999 11 11 11 11 11 11 11 11 55 0 0 33 38 0 0 32 29 0 0 30 25 0 0 24 32 0 0 37 26 0 0 29 26 0 0 33 23 0 0 23 43 @
chr5 57663404 T G 999 11 11 11 11 11 11 11 11 32 0 0 18 22 0 0 16 16 1 0 17 23 2 1 20 24 0 0 24 18 1 0 19 21 1 0 18 17 0 0 23 27 merge_repeat chromOut
chr5 58105142 A G 999 11 11 11 11 11 11 11 11 24 0 0 9 17 0 0 9 19 0 0 6 18 0 0 6 26 0 0 6 18 0 0 7 22 0 0 5 25 0 0 7 21 merge_repeat chromOut
chr5 58488087 T G 999 11 11 11 11 11 11 11 11 42 0 0 23 22 0 0 20 32 0 0 24 31 0 0 26 28 0 0 19 40 0 0 18 24 0 0 21 21 0 0 23 26 merge_repeat chromOut nested
chr5 60841525 A T 999 11 11 11 11 11 11 11 11 33 0 0 13 27 0 0 6 32 0 0 8 25 0 0 13 33 0 0 18 33 0 0 14 19 0 0 9 24 0 0 19 33 @
chr5 63152374 C A 999 11 11 11 11 11 11 11 11 37 0 0 15 27 0 0 20 34 0 0 15 23 0 0 17 20 0 0 17 24 0 0 21 34 0 0 22 20 0 0 21 18 merge_repeat chromOut nested
chr5 64737069 T C 999 11 11 11 11 11 11 11 11 26 0 0 18 16 0 0 16 10 0 0 19 18 0 0 26 14 0 0 27 32 0 0 18 10 0 0 16 15 0 0 15 13 @
chr5 66686044 T C 999 11 11 11 11 11 11 11 11 45 0 0 16 29 0 0 29 41 0 0 22 35 0 0 29 45 0 0 18 36 0 0 31 29 0 0 12 36 0 0 22 33 @
chr5 68753309 T C 999 11 11 11 11 11 11 11 11 24 0 0 13 15 0 0 13 11 0 0 16 15 0 0 22 19 0 0 16 16 0 0 17 14 0 0 17 17 0 0 18 13 merge_repeat trfMask chromOut simple nested
chr5 68796342 G T 999 11 11 11 11 11 11 11 11 30 0 0 17 31 0 0 15 30 0 0 18 16 0 0 19 37 0 0 25 38 0 0 12 34 0 0 11 19 0 0 13 23 @
chr5 69357018 T G 999 11 11 11 11 11 11 11 11 22 0 0 12 10 0 1 24 10 0 0 17 13 0 0 19 21 0 0 22 25 0 0 27 19 0 0 11 11 0 1 14 14 @
chr5 70493297 A G 999 11 11 11 11 11 11 11 11 59 0 0 33 30 0 0 46 33 0 0 36 29 0 0 31 28 0 0 42 36 0 0 35 30 0 0 37 29 0 0 36 30 merge_repeat chromOut
chr5 71143078 T C 999 11 11 11 11 11 11 11 11 45 0 0 27 25 0 0 30 15 0 0 37 27 0 0 35 27 0 0 30 31 0 0 25 27 0 0 28 28 0 0 21 29 merge_repeat chromOut nested
chr5 75364723 A C 999 11 11 11 11 11 11 11 11 48 0 0 34 20 0 0 34 20 0 0 40 22 0 0 44 32 0 0 38 25 0 0 38 18 0 0 28 20 0 0 31 17 @
chr5 75397327 A G 999 11 11 11 11 11 11 11 11 25 0 0 17 22 0 0 26 19 0 0 16 9 0 0 26 12 0 0 19 15 0 0 25 17 0 0 30 13 0 0 19 7 @
chr5 75465016 C G 999 11 11 11 11 11 11 11 11 47 0 0 20 27 0 0 29 31 0 0 18 39 0 0 19 31 0 0 26 27 0 0 30 28 0 0 20 27 0 0 21 27 merge_repeat chromOut
chr5 76107246 C T 999 11 11 11 11 11 11 11 11 27 0 0 27 8 0 0 26 8 0 0 15 12 0 0 31 8 0 0 23 7 0 0 27 17 0 0 30 6 0 0 26 11 merge_repeat chromOut
chr5 76107294 G C 999 11 11 11 11 11 11 11 11 31 0 0 20 12 0 0 24 17 0 0 14 17 0 0 36 15 0 0 24 11 0 0 23 24 0 0 24 15 0 0 19 17 merge_repeat chromOut
chr5 76315310 A G 999 11 11 11 11 11 11 11 11 49 0 0 20 29 0 0 36 41 0 0 33 26 0 0 37 22 0 0 40 29 0 0 32 29 0 0 32 33 0 0 27 34 merge_repeat chromOut
chr5 76467972 C G 999 11 11 11 11 11 11 11 11 44 0 0 20 35 0 0 21 46 0 0 18 31 0 0 22 29 0 0 26 22 0 0 18 27 0 1 14 29 0 0 16 29 merge_repeat trfMask chromOut simple nested
chr5 78148398 A C 999 11 11 11 11 11 11 11 11 39 0 0 20 22 0 0 23 23 0 0 31 15 0 0 22 27 0 0 22 29 0 0 24 33 0 0 24 19 0 0 21 18 @
chr5 78343662 C A 999 11 11 11 11 11 11 11 11 32 0 0 21 11 0 0 18 17 0 0 18 24 1 1 25 19 1 1 18 19 1 1 18 18 0 0 15 25 0 1 25 19 merge_repeat trfMask chromOut simple
chr5 78614048 G T 999 11 11 11 11 11 11 11 11 55 0 0 32 28 0 0 30 25 0 0 38 27 0 0 37 29 0 0 30 32 0 0 21 36 0 0 34 25 0 0 44 28 merge_repeat chromOut
chr5 78713767 T G 999 11 11 11 11 11 11 11 11 57 0 0 31 34 0 0 29 36 0 0 30 38 0 0 43 38 0 0 22 35 0 0 29 36 0 0 25 39 0 0 34 28 merge_repeat chromOut
chr5 80767381 A T 999 11 11 11 11 11 11 11 11 22 0 0 12 17 0 0 10 12 0 0 8 14 0 0 10 17 0 0 9 14 0 0 14 11 0 0 7 15 0 0 9 14 merge_repeat chromOut nested
chr5 81679998 T C 999 11 11 11 11 11 11 11 11 45 0 0 37 29 0 0 38 20 0 0 44 28 0 0 32 45 0 0 33 33 0 0 35 38 0 0 25 20 0 0 33 24 merge_repeat chromOut
chr5 82506412 A T 999 11 11 11 11 11 11 11 11 43 0 0 29 51 0 0 19 41 0 0 28 25 0 0 43 30 0 0 18 25 0 0 27 31 0 0 24 34 0 0 22 44 merge_repeat chromOut nested
chr5 83333345 C T 999 11 11 11 11 11 11 11 11 55 0 0 27 36 0 0 32 37 0 0 26 31 0 0 31 31 0 0 37 24 0 0 28 32 0 0 27 28 0 0 26 30 @
chr5 83884952 T A 999 11 11 11 11 11 11 11 11 56 0 0 35 31 0 0 37 33 0 0 26 30 0 0 32 33 0 0 40 28 0 0 37 38 0 0 41 23 0 0 34 29 @
chr5 83964351 G T 999 11 11 11 11 11 11 11 11 41 0 0 27 29 0 0 18 25 0 0 27 14 0 0 30 32 0 0 35 15 0 0 26 28 0 0 24 26 0 0 32 30 merge_repeat chromOut nested
chr5 83964390 A T 999 11 11 11 11 11 11 11 11 48 0 0 23 44 0 0 15 33 0 0 28 28 0 0 33 38 0 0 32 21 0 0 27 33 0 0 23 32 0 0 31 31 merge_repeat chromOut nested
chr5 84026893 T A 999 11 11 11 11 11 11 11 11 58 0 0 27 33 0 0 29 29 0 0 21 48 0 0 31 30 0 0 25 35 0 0 34 38 0 0 38 33 0 0 23 41 @
chr5 85362919 T G 999 11 11 11 11 11 11 11 11 56 0 0 29 29 0 0 46 26 0 0 36 30 0 0 35 21 0 0 33 32 0 0 30 28 0 0 38 38 0 0 43 31 merge_repeat chromOut
chr5 85363986 A G 999 11 11 11 11 11 11 11 11 25 0 0 24 18 0 0 15 20 0 0 23 18 0 0 20 17 0 0 23 14 0 0 22 17 0 0 18 7 0 0 16 20 @
chr5 85364116 A G 999 11 11 11 11 11 11 11 11 35 0 0 32 21 1 0 31 19 0 0 30 11 0 0 26 22 0 0 20 15 0 0 30 23 0 0 21 24 1 0 27 22 @
chr5 85364208 C A 999 11 11 11 11 11 11 11 11 46 0 0 30 24 0 0 32 26 0 0 29 17 0 0 29 35 0 0 30 25 0 0 29 26 0 0 33 31 0 0 21 28 @
chr5 85364244 T A 999 11 11 11 11 11 11 11 11 51 0 0 27 24 0 0 28 23 0 0 24 27 0 0 34 34 0 0 31 31 0 0 24 31 0 0 28 28 0 0 18 33 @
chr5 85364347 C T 999 11 11 11 11 11 11 11 11 48 0 0 29 35 0 0 29 28 0 0 36 36 0 0 38 27 0 0 30 26 0 0 27 27 0 0 26 22 0 0 21 34 @
chr5 85465628 C A 999 11 11 11 11 11 11 11 11 25 0 0 12 13 0 1 15 17 0 0 24 21 0 0 12 17 0 0 23 27 0 0 12 17 0 0 15 22 0 0 14 21 merge_repeat chromOut nested
chr5 85717955 G A 999 11 11 11 11 11 11 11 11 43 0 0 24 26 0 0 40 21 0 0 25 18 0 0 30 36 0 0 27 40 0 0 32 25 0 0 19 25 0 0 23 28 merge_repeat chromOut nested
chr5 85791300 C T 999 11 11 11 11 11 11 11 11 47 0 0 32 15 0 0 42 26 0 0 33 25 0 0 40 36 0 0 30 18 0 0 29 26 0 0 30 27 0 0 23 24 merge_repeat chromOut nested
chr5 86703601 A G 999 11 11 11 11 11 11 11 11 26 0 0 20 13 0 0 11 17 0 0 20 16 0 0 16 15 0 0 20 15 0 0 22 20 0 0 17 9 0 0 17 12 merge_repeat chromOut
chr5 88381307 A G 999 11 11 11 11 11 11 11 11 45 0 0 40 24 0 0 27 29 0 0 24 35 0 0 35 27 0 0 24 21 0 0 22 24 0 0 34 32 0 0 35 27 @
chr5 89282777 A C 999 11 11 11 11 11 11 11 11 47 0 0 21 36 0 0 28 22 0 0 23 24 0 0 37 26 0 0 21 40 0 0 18 29 0 0 30 34 0 0 27 22 merge_repeat trfMask chromOut simple
chr5 90886573 T G 999 11 11 11 11 11 11 11 11 47 0 0 28 19 0 0 40 24 0 0 38 34 0 0 33 22 0 0 33 31 0 0 25 36 0 0 36 22 0 0 38 18 @
chr5 92944673 A G 999 11 11 11 11 11 11 11 11 26 0 0 20 6 0 0 23 13 0 0 27 15 0 0 28 22 0 0 28 14 0 0 20 10 0 0 28 15 0 0 22 13 @
chr5 94344617 A G 999 11 11 11 11 11 11 11 11 60 0 0 42 40 0 0 38 32 0 0 35 31 0 0 50 32 0 0 50 41 0 0 30 30 0 0 35 31 0 0 33 32 merge_repeat chromOut nested segmentDup
chr5 100102653 T C 999 11 11 11 11 11 11 11 11 48 0 0 20 36 0 0 25 23 0 0 24 28 0 0 32 30 0 0 27 40 0 0 23 27 0 0 35 42 0 0 32 30 merge_repeat chromOut
chr5 100467719 G A 999 11 11 11 11 11 11 11 11 24 0 0 9 15 0 0 11 21 0 0 10 16 0 0 12 22 0 0 7 22 0 0 5 20 0 0 4 21 0 0 4 23 merge_repeat chromOut
chr5 100634984 C A 999 11 11 11 11 11 11 11 11 22 0 0 12 14 0 0 6 16 0 0 12 19 0 0 15 18 0 0 6 16 0 0 6 16 0 0 10 19 0 0 1 23 merge_repeat chromOut
chr5 101330678 A G 999 11 11 11 11 11 11 11 11 40 0 0 22 27 0 0 30 35 0 0 31 35 0 0 41 31 0 0 32 28 0 0 26 24 0 0 17 23 0 0 29 18 @
chr5 103445196 A C 999 11 11 11 11 11 11 11 11 22 0 0 23 5 0 0 19 3 0 0 26 7 0 0 35 10 0 0 13 11 0 0 27 12 0 0 23 7 0 0 14 8 merge_repeat chromOut
chr5 105054159 A G 999 11 11 11 11 11 11 11 11 26 0 0 8 25 0 0 12 17 0 0 6 23 0 0 9 22 0 0 8 24 0 0 13 24 0 0 13 21 0 0 6 20 merge_repeat chromOut
chr5 105230836 T C 999 11 11 11 11 11 11 11 11 33 0 0 23 15 0 0 22 13 0 0 25 24 0 0 17 16 0 0 28 21 0 0 20 23 0 0 25 17 0 0 20 13 merge_repeat chromOut nested segmentDup
chr5 105230837 C T 999 11 11 11 11 11 11 11 11 33 0 0 23 15 0 0 22 13 0 0 25 24 0 0 17 16 0 0 28 20 0 0 20 23 0 0 25 17 0 0 20 13 merge_repeat chromOut nested segmentDup
chr5 111071628 A G 999 11 11 11 11 11 11 11 11 42 0 0 30 18 0 0 35 19 0 0 32 23 0 0 38 13 0 0 38 29 0 0 36 18 0 0 25 17 0 0 20 28 @
chr5 112084211 C A 999 11 11 11 11 11 11 11 11 71 0 0 34 37 0 0 39 56 0 0 37 42 0 0 27 60 0 0 27 44 0 0 31 44 0 0 28 48 0 0 38 50 merge_repeat trfMask chromOut simple
chr5 112444205 C A 999 11 11 11 11 11 11 11 11 39 0 0 39 23 0 0 39 22 0 0 25 14 0 0 33 22 0 0 33 37 0 0 37 21 0 0 33 21 0 0 33 24 merge_repeat chromOut nested
chr5 113536402 T A 999 11 11 11 11 11 11 11 11 50 0 0 24 26 0 0 31 24 0 0 29 27 0 0 36 22 0 0 33 18 0 0 34 20 0 0 29 23 0 0 28 22 merge_repeat chromOut
chr5 114965643 A C 999 11 11 11 11 11 11 11 11 36 0 0 16 28 0 0 18 18 0 0 16 26 0 0 23 23 0 0 19 19 0 0 21 23 0 0 25 17 0 0 29 10 merge_repeat chromOut
chr5 115186510 T C 999 11 11 11 11 11 11 11 11 23 0 0 14 14 0 0 20 13 0 0 15 14 0 0 23 27 0 0 13 20 0 0 21 14 0 0 10 17 0 0 17 6 @
chr5 115202063 A T 999 11 11 11 11 11 11 11 11 52 0 0 32 39 0 0 28 27 0 0 43 36 0 0 38 31 0 0 34 29 0 0 21 33 0 0 28 24 0 0 28 31 @
chr5 115202077 C T 999 11 11 11 11 11 11 11 11 52 0 0 33 36 0 0 33 24 0 0 41 36 0 0 39 28 0 0 39 27 0 0 25 31 0 0 26 26 0 0 30 32 @
chr5 115210777 A G 999 11 11 11 11 11 11 11 11 24 0 0 9 25 0 0 7 17 0 0 10 18 0 0 11 35 0 0 7 27 0 0 11 30 0 0 13 27 0 0 9 15 @
chr5 115213747 A C 999 11 11 11 11 11 11 11 11 25 0 0 10 18 0 0 6 19 0 0 10 18 0 0 16 32 0 0 20 25 0 0 11 30 0 0 9 17 0 0 14 20 merge_repeat trfMask chromOut simple
chr5 115217386 A G 999 11 11 11 11 11 11 11 11 41 0 0 22 37 0 0 12 30 0 0 19 34 0 0 18 36 0 0 25 31 0 0 30 22 0 0 20 21 0 0 27 27 merge_repeat chromOut nested
chr5 116765766 A T 999 11 11 11 11 11 11 11 11 25 0 0 10 15 0 0 14 27 0 0 12 24 0 0 11 27 0 0 14 28 0 0 21 14 0 0 12 18 0 0 19 18 merge_repeat trfMask chromOut simple
chr5 117024408 A G 999 11 11 11 11 11 11 11 11 38 0 0 27 11 0 0 25 17 0 0 32 19 0 0 32 27 0 0 31 31 0 0 27 17 0 0 30 16 0 0 38 22 merge_repeat nested
chr5 118337464 G T 999 11 11 11 11 11 11 11 11 38 0 0 32 20 0 0 20 21 0 0 16 24 0 0 28 20 0 0 21 21 0 0 18 20 0 0 15 25 0 0 24 21 merge_repeat trfMask chromOut simple nested
chr5 118351747 A C 999 11 11 11 11 11 11 11 11 22 0 0 4 21 0 0 10 17 0 0 7 19 0 0 10 37 0 0 11 21 0 0 5 17 0 0 6 24 0 0 7 26 merge_repeat trfMask chromOut simple nested
chr5 118432150 A T 999 11 11 11 11 11 11 11 11 20 0 0 17 10 0 0 13 13 0 0 8 21 0 0 20 14 0 0 10 10 0 0 14 17 0 0 20 9 0 0 13 20 merge_repeat trfMask chromOut simple
chr5 118432187 A T 999 11 11 11 11 11 11 11 11 23 0 0 16 14 0 0 13 14 0 0 9 21 0 0 21 13 0 0 12 11 0 0 17 14 0 0 21 6 0 0 14 15 merge_repeat trfMask chromOut simple
chr5 118432201 A T 999 11 11 11 11 11 11 11 11 20 0 0 16 12 0 0 13 10 0 0 9 19 0 0 18 10 0 0 10 10 0 0 14 9 0 0 17 3 0 1 16 10 merge_repeat trfMask chromOut simple
chr5 118620370 G C 999 11 11 11 11 11 11 11 11 42 0 0 30 28 0 0 29 21 0 0 40 25 0 0 33 22 0 0 34 21 0 0 29 30 0 0 31 30 0 0 27 15 merge_repeat chromOut
chr5 118911122 G T 999 11 11 11 11 11 11 11 11 80 0 0 45 55 0 0 46 49 0 0 46 55 0 0 44 41 0 0 47 46 0 0 39 46 0 0 41 39 0 0 42 45 merge_repeat trfMask chromOut simple
chr5 118911204 G T 999 11 11 11 11 11 11 11 11 71 0 0 37 53 0 0 55 44 0 0 37 47 0 0 38 36 0 0 35 36 0 0 35 37 0 0 39 37 0 0 48 43 merge_repeat chromOut simple
chr5 118911233 T G 999 11 11 11 11 11 11 11 11 55 0 0 30 51 0 0 44 37 0 0 40 41 0 0 39 34 0 0 28 27 0 0 30 29 0 0 37 34 0 0 42 37 merge_repeat chromOut simple
chr5 118911236 G T 999 11 11 11 11 11 11 11 11 55 0 0 30 51 0 0 44 37 0 0 40 41 0 0 39 34 0 0 28 27 0 0 30 29 0 0 37 34 0 0 41 37 merge_repeat chromOut simple
chr5 118911240 G T 999 11 11 11 11 11 11 11 11 55 0 0 30 51 0 0 44 37 0 0 40 41 0 0 38 34 0 0 28 27 0 0 30 29 0 0 37 34 0 0 41 37 merge_repeat chromOut simple
chr5 118911245 G T 999 11 11 11 11 11 11 11 11 55 0 0 30 51 0 0 44 37 0 0 40 41 0 0 39 34 0 0 28 27 0 0 30 29 0 0 37 34 0 0 42 37 merge_repeat chromOut simple
chr5 118911271 G T 999 11 11 11 11 11 11 11 11 31 0 0 18 31 0 0 24 23 0 0 19 24 0 0 20 25 0 0 14 17 0 0 20 17 0 0 19 23 0 0 24 25 merge_repeat simple
chr5 118911273 G T 999 11 11 11 11 11 11 11 11 31 1 0 18 31 0 0 24 23 0 0 19 24 0 0 20 25 0 0 14 17 0 0 20 17 0 0 19 23 0 0 24 25 merge_repeat simple
chr5 118911274 T G 999 11 11 11 11 11 11 11 11 31 1 0 18 31 0 0 24 23 0 0 19 24 0 0 20 25 0 0 14 17 0 0 21 17 0 0 19 23 0 0 24 25 merge_repeat simple
chr5 118911275 A T 999 11 11 11 11 11 11 11 11 31 0 0 18 31 0 0 24 23 0 0 19 24 0 0 20 25 0 0 14 17 0 0 21 17 0 0 19 23 0 0 24 25 merge_repeat simple
chr5 118911279 G T 999 11 11 11 11 11 11 11 11 36 0 0 22 32 0 0 25 24 0 0 21 25 0 0 22 29 0 0 15 21 0 0 23 20 0 0 20 25 0 0 24 26 merge_repeat chromOut
chr5 119141291 G A 999 11 11 11 11 11 11 11 11 36 0 0 25 20 0 0 25 17 0 0 21 26 0 0 20 21 0 0 27 29 0 0 16 23 0 0 20 16 0 0 23 30 merge_repeat chromOut
chr5 120023982 A G 999 11 11 11 11 11 11 11 11 36 0 0 30 17 0 0 25 15 0 0 28 27 0 0 22 21 0 0 31 18 0 0 20 25 0 0 22 14 0 0 22 18 @
chr5 120398010 G A 999 11 11 11 11 11 11 11 11 33 0 0 46 2 0 0 35 5 0 0 27 10 0 0 32 8 0 0 39 10 0 0 32 6 0 0 32 6 0 0 29 4 merge_repeat trfMask chromOut simple
chr5 120830912 T C 999 11 11 11 11 11 11 11 11 49 0 0 34 21 0 0 36 28 0 0 28 22 0 0 44 34 0 0 29 27 0 0 26 29 0 0 29 34 0 0 26 23 @
chr5 121044017 A C 999 11 11 11 11 11 11 11 11 37 0 0 13 25 0 0 15 35 0 0 16 24 0 0 27 29 0 0 18 30 0 0 21 20 0 0 13 24 0 0 17 28 @
chr5 121157239 A G 999 11 11 11 11 11 11 11 11 29 0 0 18 11 0 0 19 17 0 0 23 9 0 0 28 10 0 0 26 9 0 0 28 8 0 0 16 13 0 0 24 12 @
chr5 122674491 G T 999 11 11 11 11 11 11 11 11 37 0 0 28 22 0 0 22 18 0 0 26 31 0 0 22 23 0 0 23 27 0 0 17 20 0 0 29 23 1 0 18 27 @
chr5 122704076 A G 999 11 11 11 11 11 11 11 11 38 0 0 18 34 0 0 21 33 0 0 17 37 0 0 14 33 0 0 16 30 0 0 12 26 0 0 17 27 0 0 13 28 merge_repeat chromOut nested
chr5 122704100 G A 999 11 11 11 11 11 11 11 11 41 0 0 34 28 0 0 28 33 0 0 24 39 0 0 24 36 0 0 26 30 0 0 18 23 0 0 25 32 0 0 17 27 merge_repeat chromOut nested
chr5 122772909 T C 999 11 11 11 11 11 11 11 11 44 0 0 27 22 0 0 39 25 0 0 23 28 0 0 29 30 0 0 33 33 0 0 21 23 0 0 39 25 0 0 26 20 @
chr5 124631595 T C 999 11 11 11 11 11 11 11 11 21 0 0 14 21 0 0 17 16 0 0 13 22 0 0 17 22 0 0 10 17 0 0 12 9 0 0 18 25 0 0 11 18 @
chr5 124631596 A C 999 11 11 11 11 11 11 11 11 21 0 0 15 21 0 0 17 16 0 0 13 22 0 0 17 22 0 0 10 17 0 0 12 9 0 0 18 25 0 0 11 18 @
chr5 124631601 G C 999 11 11 11 11 11 11 11 11 20 0 0 14 21 0 0 15 15 0 0 11 22 0 0 15 21 0 0 10 17 0 0 11 9 0 0 17 25 0 0 11 18 @
chr5 124631762 G A 999 11 11 11 11 11 11 11 11 30 0 0 20 23 0 0 20 15 0 0 23 25 0 0 21 33 0 0 33 18 0 0 12 18 0 0 20 24 0 0 19 23 @
chr5 124638248 A G 999 11 11 11 11 11 11 11 11 20 0 0 20 9 0 0 13 13 0 0 11 9 0 0 16 10 0 0 20 10 0 0 23 5 0 0 21 8 0 0 17 7 merge_repeat chromOut
chr5 124638290 G C 999 11 11 11 11 11 11 11 11 30 0 0 25 15 0 0 17 25 0 0 15 20 0 0 23 19 0 0 25 17 0 0 26 23 0 0 29 21 0 0 17 13 merge_repeat chromOut
chr5 124638339 G T 999 11 11 11 11 11 11 11 11 38 0 0 23 15 0 0 22 20 0 0 28 18 0 0 30 19 0 0 25 15 0 0 26 21 0 0 35 15 0 0 27 16 merge_repeat chromOut
chr5 125753204 A T 999 11 11 11 11 11 11 11 11 25 0 0 20 25 0 0 8 17 0 0 13 25 0 0 8 30 0 0 20 16 0 0 12 32 0 0 13 23 0 0 23 14 merge_repeat trfMask chromOut simple
chr5 126292944 A T 999 11 11 11 11 11 11 11 11 34 0 0 28 22 0 0 23 17 0 0 25 19 0 0 23 15 1 0 16 21 0 0 18 16 0 0 19 20 0 0 20 20 merge_repeat trfMask chromOut simple
chr5 129106607 A T 999 11 11 11 11 11 11 11 11 33 0 0 13 20 0 0 18 19 0 0 25 20 0 0 23 23 0 0 18 26 0 0 23 20 0 0 22 19 0 0 19 16 merge_repeat trfMask chromOut simple
chr5 129791088 G T 999 11 11 11 11 11 11 11 11 39 0 0 17 22 0 0 16 31 0 0 18 25 0 0 16 34 0 0 16 31 0 0 16 27 0 0 9 32 0 0 14 25 @
chr5 130874269 G T 999 11 11 11 11 11 11 11 11 31 0 0 16 15 0 0 18 25 0 0 14 21 0 0 16 28 0 0 23 20 0 0 12 22 0 0 13 19 0 0 21 26 @
chr5 131032898 A C 999 11 11 11 11 11 11 11 11 48 0 0 31 17 0 0 26 22 0 0 19 37 0 0 24 36 0 0 26 33 0 0 33 20 0 0 24 27 0 0 27 25 @
chr5 132564209 G C 999 11 11 11 11 11 11 11 11 27 0 0 28 11 0 0 25 7 0 0 19 8 0 0 26 16 0 0 17 13 0 0 22 8 0 0 21 10 0 0 30 14 merge_repeat nested
chr5 133497905 C T 999 11 11 11 11 11 11 11 11 50 0 0 21 29 0 0 42 24 0 0 25 38 0 0 28 34 0 0 25 26 0 0 22 40 0 0 24 27 0 0 30 35 merge_repeat chromOut nested
chr5 134156421 A G 999 11 11 11 11 11 11 11 11 20 0 0 19 21 0 0 21 15 0 0 18 18 0 0 10 11 1 0 17 27 0 0 21 19 0 0 18 9 0 0 10 10 merge_repeat chromOut
chr5 136176119 G T 999 11 11 11 11 11 11 11 11 55 0 0 41 35 0 0 43 42 0 0 38 39 0 0 41 42 0 0 40 30 0 0 25 30 0 0 35 32 0 0 31 24 merge_repeat chromOut
chr5 136176687 T C 999 11 11 11 11 11 11 11 11 38 0 0 11 29 0 0 25 14 0 0 18 27 0 0 23 28 0 0 27 24 0 0 27 15 0 0 17 25 0 0 20 18 merge_repeat chromOut
chr5 136727439 A C 999 11 11 11 11 11 11 11 11 44 0 0 18 34 0 0 26 43 1 0 24 42 0 0 24 38 0 0 18 33 0 0 18 43 0 0 15 29 0 0 17 36 merge_repeat chromOut simple
chr5 136727440 G A 999 11 11 11 11 11 11 11 11 44 0 0 18 33 0 0 26 43 0 0 24 41 0 0 24 38 0 0 18 33 0 0 18 43 0 0 15 29 0 0 17 35 merge_repeat chromOut simple
chr5 136779329 T C 999 11 11 11 11 11 11 11 11 32 0 0 23 24 0 0 17 23 0 0 19 16 0 0 27 16 0 0 24 25 0 0 16 16 0 0 22 20 0 0 25 17 merge_repeat chromOut nested
chr5 137132601 C T 999 11 11 11 11 11 11 11 11 33 0 0 24 21 0 0 19 14 0 0 28 35 0 0 33 23 0 0 27 25 0 0 29 22 0 0 28 24 0 0 22 17 merge_repeat chromOut
chr5 137132602 A G 999 11 11 11 11 11 11 11 11 34 0 0 24 20 0 0 20 14 0 0 28 35 0 0 33 23 0 0 27 25 0 0 29 22 0 0 28 24 0 0 22 17 merge_repeat chromOut
chr5 137132978 T C 999 11 11 11 11 11 11 11 11 53 0 0 29 25 0 0 36 27 1 0 31 39 0 0 34 37 0 0 32 21 0 0 36 30 0 0 30 28 0 0 33 26 merge_repeat chromOut simple
chr5 137133141 A C 999 11 11 11 11 11 11 11 11 43 0 0 28 15 0 0 36 28 0 0 33 32 0 0 30 35 0 0 32 22 0 0 44 23 0 0 28 20 0 0 33 27 merge_repeat chromOut simple
chr5 137152462 A T 999 11 11 11 11 11 11 11 11 202 0 9 135 126 0 5 151 143 0 5 154 113 0 3 129 121 0 3 132 112 0 2 92 108 0 1 127 130 0 5 136 130 merge_repeat simple
chr5 137152588 C A 999 11 11 11 11 11 11 11 11 189 0 0 33 167 0 1 19 169 0 0 31 184 0 0 25 194 0 0 42 178 0 0 40 162 0 0 23 170 0 0 27 190 merge_repeat simple
chr5 137152790 T G 999 11 11 11 11 11 11 11 11 105 0 0 37 97 0 0 36 122 0 2 33 94 0 1 33 92 0 0 30 75 0 1 32 76 0 0 37 82 0 1 33 100 merge_repeat simple
chr5 137162871 C G 999 11 11 11 11 11 11 11 11 32 0 0 28 22 0 0 34 14 0 0 22 30 0 0 34 23 0 0 34 27 0 0 22 28 0 0 22 25 0 0 21 11 @
chr5 137162984 G C 999 11 11 11 11 11 11 11 11 41 0 0 26 28 0 0 29 25 0 0 20 22 0 0 28 19 0 0 28 28 0 0 16 25 0 0 26 27 0 0 32 20 @
chr5 137162992 A C 999 11 11 11 11 11 11 11 11 41 0 0 27 26 0 0 29 24 0 0 22 20 0 0 29 18 0 0 25 28 0 0 17 24 0 0 26 25 0 0 30 20 @
chr5 137177051 A C 999 11 11 11 11 11 11 11 11 23 0 0 11 20 0 0 8 23 0 0 9 18 0 0 8 19 0 0 11 17 0 0 9 14 0 0 11 18 0 0 9 15 @
chr5 137177222 C G 999 11 11 11 11 11 11 11 11 21 0 0 20 14 0 0 17 21 0 0 7 14 0 0 20 28 0 0 23 23 0 0 11 16 0 0 17 28 0 0 15 24 @
chr5 137177223 T C 999 11 11 11 11 11 11 11 11 21 0 0 20 14 0 0 17 21 0 0 7 14 0 0 20 28 0 0 23 22 0 0 11 16 0 0 17 28 0 0 15 24 @
chr5 137177293 A C 999 11 11 11 11 11 11 11 11 29 0 0 20 14 0 0 16 16 0 0 24 9 0 0 20 16 0 0 31 12 0 0 19 10 0 0 31 24 0 0 22 13 @
chr5 137177323 A T 999 11 11 11 11 11 11 11 11 29 0 0 20 11 0 0 21 10 0 0 26 8 0 0 22 11 0 0 28 7 0 0 21 8 0 0 32 17 0 0 24 6 @
chr5 137187525 A G 999 11 11 11 11 11 11 11 11 35 0 0 22 23 0 0 28 17 0 0 20 17 0 0 28 18 0 0 23 23 0 0 19 22 0 0 32 19 0 0 18 17 @
chr5 138310512 A G 999 11 11 11 11 11 11 11 11 55 0 0 33 30 0 0 24 32 0 0 20 40 0 0 32 32 0 0 27 29 0 0 29 29 0 0 19 41 0 0 16 39 @
chr5 138684234 C A 999 11 11 11 11 11 11 11 11 40 0 0 43 13 0 0 36 11 0 0 30 24 0 0 29 22 0 0 22 18 0 0 28 18 0 0 38 12 0 0 25 17 merge_repeat trfMask chromOut simple
chr5 138684238 C A 999 11 11 11 11 11 11 11 11 40 0 0 44 12 0 0 39 12 0 0 31 22 0 0 29 20 0 0 21 19 0 0 28 18 0 0 42 13 0 0 27 17 merge_repeat trfMask chromOut simple
chr5 138684242 C A 999 11 11 11 11 11 11 11 11 40 0 0 45 12 0 0 41 11 0 0 30 23 0 0 30 21 0 0 21 19 0 0 28 19 0 0 43 15 0 0 28 18 merge_repeat trfMask chromOut simple
chr5 141563082 C A 999 11 11 11 11 11 11 11 11 39 0 0 18 25 0 0 27 17 0 0 25 14 0 0 26 14 0 0 24 23 0 0 28 21 0 0 15 24 0 0 24 24 merge_repeat trfMask chromOut simple nested
chr5 141604527 T C 999 11 11 11 11 11 11 11 11 54 0 0 31 25 0 0 42 28 0 0 38 24 0 0 32 22 0 0 32 34 0 0 39 27 0 0 31 33 0 0 30 26 merge_repeat chromOut
chr5 142827958 G T 999 11 11 11 11 11 11 11 11 42 0 0 27 31 0 0 21 35 1 0 25 52 0 0 23 34 0 0 29 43 0 0 22 34 0 1 18 23 0 1 20 25 merge_repeat chromOut simple nested
chr5 143573730 A G 999 11 11 11 11 11 11 11 11 39 0 0 17 33 0 0 19 26 0 0 28 30 0 0 20 28 0 0 33 25 0 0 16 23 0 0 24 35 0 0 22 21 merge_repeat chromOut
chr5 143576783 G A 999 11 11 11 11 11 11 11 11 21 0 0 7 14 0 0 10 13 0 0 11 12 0 0 9 24 0 0 12 23 0 0 8 17 0 0 7 17 0 0 7 19 @
chr5 143576798 G T 999 11 11 11 11 11 11 11 11 24 0 0 11 14 0 0 13 12 0 0 14 10 0 0 10 24 0 0 14 24 0 0 9 15 0 0 10 16 0 0 10 16 merge_repeat chromOut nested
chr5 144229063 A T 999 11 11 11 11 11 11 11 11 28 0 0 15 19 0 0 15 16 0 0 10 18 0 0 13 16 0 0 18 13 0 0 19 12 0 0 14 14 0 0 15 16 @
chr5 144229085 G T 999 11 11 11 11 11 11 11 11 28 0 0 17 18 0 0 17 13 0 0 19 16 0 0 15 16 0 0 23 11 0 0 22 12 0 0 16 12 0 0 18 13 merge_repeat chromOut
chr5 144278887 G T 999 11 11 11 11 11 11 11 11 20 0 0 11 10 0 0 10 10 1 0 14 12 0 1 17 9 0 0 19 12 0 0 15 11 0 0 15 12 0 0 11 10 merge_repeat chromOut
chr5 147937592 A G 999 11 11 11 11 11 11 11 11 39 0 1 20 18 0 1 21 18 0 0 23 20 1 0 29 18 0 0 27 27 1 0 22 18 0 0 32 18 0 0 23 19 merge_repeat trfMask chromOut simple
chr5 148442567 A C 999 11 11 11 11 11 11 11 11 49 0 0 25 33 0 0 21 42 0 0 32 32 0 0 15 36 0 0 14 35 0 0 31 39 0 0 27 28 0 0 19 34 @
chr5 148442596 A T 999 11 11 11 11 11 11 11 11 31 0 0 18 18 0 0 13 23 0 0 21 20 0 0 15 22 0 0 9 24 0 0 26 23 0 0 14 17 0 0 13 21 @
chr5 148442597 A C 999 11 11 11 11 11 11 11 11 31 0 0 18 20 0 0 13 24 0 0 21 20 0 0 15 24 0 0 9 25 0 0 26 23 0 0 14 17 0 0 13 21 @
chr5 148442598 A T 999 11 11 11 11 11 11 11 11 31 0 0 18 20 0 0 13 24 0 0 21 20 0 0 15 24 0 0 9 25 0 0 26 23 0 0 14 17 0 0 13 21 @
chr5 148442600 C T 999 11 11 11 11 11 11 11 11 31 0 0 18 20 0 0 13 24 0 0 21 20 0 0 15 23 0 0 9 25 0 0 26 23 0 0 14 17 0 0 13 21 @
chr5 148442602 A T 999 11 11 11 11 11 11 11 11 31 0 0 18 20 0 0 13 24 0 0 21 20 0 0 15 24 0 0 9 25 0 0 26 23 0 0 14 17 0 0 13 21 @
chr5 148442603 C T 999 11 11 11 11 11 11 11 11 31 0 0 18 20 0 0 13 24 0 0 21 20 0 0 15 24 0 0 9 25 0 0 26 23 0 0 14 17 0 0 13 21 @
chr5 148442604 G T 999 11 11 11 11 11 11 11 11 31 0 0 18 20 0 0 13 24 0 0 21 20 0 0 15 24 0 0 9 25 0 0 26 23 0 0 14 17 0 0 13 21 @
chr5 148442606 C G 999 11 11 11 11 11 11 11 11 32 0 0 18 20 0 0 13 24 0 0 21 20 0 0 15 23 0 0 9 24 0 0 26 23 0 0 14 18 0 0 13 22 @
chr5 148475495 G T 999 11 11 11 11 11 11 11 11 30 0 0 11 19 0 0 27 18 0 0 21 27 0 0 28 18 0 0 14 33 0 0 21 24 0 0 34 22 0 0 19 11 merge_repeat chromOut nested
chr5 148475578 C T 999 11 11 11 11 11 11 11 11 45 0 0 32 21 0 0 48 20 0 0 40 24 0 0 40 14 0 0 30 29 0 0 30 23 0 0 44 21 0 0 27 18 merge_repeat chromOut nested
chr5 148475745 C T 999 11 11 11 11 11 11 11 11 36 0 0 18 19 0 0 24 19 0 0 20 16 0 0 11 31 0 0 27 17 0 0 30 20 0 0 27 25 0 0 19 17 merge_repeat simple
chr5 148475753 G C 999 11 11 11 11 11 11 11 11 35 0 0 20 17 0 0 24 22 0 0 21 19 0 0 11 31 0 0 24 16 0 0 31 20 0 0 29 28 0 0 19 16 merge_repeat simple
chr5 148481961 A G 999 11 11 11 11 11 11 11 11 41 0 0 26 29 0 0 32 28 0 0 33 23 0 0 35 31 0 0 36 26 0 0 19 22 0 0 27 30 0 0 26 36 @
chr5 149281786 A T 999 11 11 11 11 11 11 11 11 22 0 0 11 14 0 0 28 19 0 0 13 19 0 0 25 17 0 0 17 19 0 0 14 8 0 0 16 14 0 0 17 14 merge_repeat trfMask chromOut simple
chr5 149298348 G A 999 11 11 11 11 11 11 11 11 56 0 0 43 35 0 0 37 29 0 0 32 24 0 0 63 27 0 0 48 26 0 0 48 34 0 0 51 23 0 0 46 24 @
chr5 149886415 T C 999 11 11 11 11 11 11 11 11 44 0 0 21 31 0 0 20 24 0 0 23 28 0 0 22 28 0 0 23 31 0 0 30 23 0 0 27 26 0 0 27 27 merge_repeat chromOut
chr5 150195669 C A 999 11 11 11 11 11 11 11 11 26 0 0 24 10 0 0 21 8 0 0 26 9 0 0 22 17 0 0 19 17 0 0 15 11 0 0 19 10 0 0 21 13 @
chr5 150241191 G T 999 11 11 11 11 11 11 11 11 43 0 0 29 27 0 0 30 22 1 0 21 23 0 0 27 24 0 0 18 25 1 0 26 28 0 0 22 22 0 0 26 35 merge_repeat trfMask chromOut simple
chr5 150263388 A G 999 11 11 11 11 11 11 11 11 32 0 0 18 16 0 0 12 22 0 0 15 28 0 0 23 23 0 0 17 25 0 0 17 19 0 0 14 18 0 0 16 19 @
chr5 150409877 A G 999 11 11 11 11 11 11 11 11 44 0 0 35 20 0 0 42 18 0 0 28 16 0 0 47 27 0 0 44 21 0 0 42 14 0 0 30 17 0 0 32 22 @
chr5 151523261 C T 999 11 11 11 11 11 11 11 11 37 0 1 20 16 0 0 32 21 0 0 29 17 0 0 21 28 0 0 24 27 0 0 25 22 0 0 25 19 0 0 25 22 merge_repeat chromOut nested