chr position ref alt quality samtools_GT_RAW min_depth 1RF 1RR 1AF 1AR 2RF 2RR 2AF 2AR 3RF 3RR 3AF 3AR 4RF 4RR 4AF 4AR 5RF 5RR 5AF 5AR 6RF 6RR 6AF 6AR 7RF 7RR 7AF 7AR 8RF 8RR 8AF 8AR merge_repeat trfMask chromOut simple nested segmentDup
chr18 3117795 A G,C 999 12 12 12 12 12 12 12 12 47 0 0 60 8 0 0 61 5 0 1 70 5 1 0 42 9 0 0 52 11 0 0 41 6 0 0 44 7 0 0 61 6 merge_repeat simple segmentDup
chr18 3117819 G C 999 11 11 11 11 11 11 11 11 36 0 1 44 7 0 0 40 3 0 0 50 5 0 1 28 7 0 1 40 9 0 1 35 6 0 1 39 5 0 0 41 3 merge_repeat simple segmentDup
chr18 5580299 G C 999 11 11 11 11 11 11 11 11 32 0 0 9 29 0 0 14 25 0 0 7 27 0 0 12 25 0 0 16 32 0 0 12 20 0 0 14 34 0 1 9 33 merge_repeat chromOut nested
chr18 5580300 A G 999 11 11 11 11 11 11 11 11 32 0 0 9 29 0 0 14 25 0 0 7 27 0 0 12 25 0 0 16 32 0 0 12 20 0 0 14 34 0 0 9 34 merge_repeat chromOut nested
chr18 6326936 C A 999 11 11 11 11 11 11 11 11 35 0 0 25 16 0 0 24 38 0 0 23 22 0 0 38 23 0 0 27 24 0 0 20 21 0 0 25 30 0 0 18 17 merge_repeat chromOut nested
chr18 10553927 C A 999 11 11 11 11 11 11 11 11 38 0 0 14 24 0 0 27 40 0 0 31 23 0 0 26 32 0 0 31 26 0 0 26 30 0 0 21 31 0 0 12 29 @
chr18 10955540 G T 999 11 11 11 11 11 11 11 11 43 0 0 38 23 0 0 24 42 0 0 21 26 0 0 24 35 0 0 22 30 0 0 21 32 0 0 28 32 0 0 17 26 @
chr18 10955583 G T 999 11 11 11 11 11 11 11 11 42 0 0 46 21 0 0 35 31 0 0 26 22 0 0 27 38 0 0 30 26 0 0 28 26 0 0 30 16 0 0 22 20 @
chr18 11041937 C A 999 11 11 11 11 11 11 11 11 47 0 0 21 28 0 1 24 27 0 0 28 19 0 0 41 37 0 0 33 20 0 0 30 18 0 0 39 26 0 0 17 30 @
chr18 11051990 C G 999 11 11 11 11 11 11 11 11 28 0 0 20 10 0 0 26 21 0 0 13 15 0 0 27 15 0 0 22 25 0 0 23 15 0 0 16 15 0 0 19 15 @
chr18 11051991 T G 999 11 11 11 11 11 11 11 11 28 0 0 19 10 0 0 26 21 0 0 13 15 0 0 27 18 0 0 22 24 0 0 23 15 0 0 16 15 0 0 19 15 @
chr18 11094666 G T 999 11 11 11 11 11 11 11 11 20 0 0 19 9 0 0 25 14 0 0 18 12 0 0 33 23 0 0 24 10 0 0 19 10 0 0 14 6 0 0 11 11 merge_repeat chromOut
chr18 11094720 A G 999 11 11 11 11 11 11 11 11 26 0 0 18 10 0 0 29 17 0 0 20 8 0 0 34 24 0 0 25 6 0 0 27 10 0 0 24 6 0 0 17 9 merge_repeat chromOut
chr18 11618267 C A 999 11 11 11 11 11 11 11 11 23 0 0 14 12 0 0 11 12 0 0 20 10 0 0 17 10 0 0 23 7 0 0 21 15 0 0 17 10 0 0 14 11 merge_repeat chromOut
chr18 12280361 A T 999 11 11 11 11 11 11 11 11 51 0 0 29 24 0 0 22 47 0 0 30 37 0 0 27 24 0 0 30 22 0 0 32 33 0 0 33 36 0 0 35 24 @
chr18 13866654 T C 999 11 11 11 11 11 11 11 11 36 0 0 31 12 0 0 23 14 0 0 25 11 0 0 28 15 0 0 42 13 0 0 34 14 0 0 30 19 0 0 30 14 merge_repeat chromOut
chr18 13921330 A C 999 11 11 11 11 11 11 11 11 41 0 0 27 22 0 0 22 24 0 0 23 18 0 0 23 18 0 0 22 23 0 0 25 22 0 0 36 15 0 0 23 19 @
chr18 13929382 T C 999 11 11 11 11 11 11 11 11 27 0 0 6 21 0 0 10 24 0 0 10 23 1 0 7 25 0 0 14 30 0 0 9 24 0 0 10 26 0 0 8 23 merge_repeat chromOut
chr18 13929402 G C 999 11 11 11 11 11 11 11 11 25 0 0 6 19 0 0 11 23 0 0 11 22 0 0 12 19 0 0 15 25 0 0 9 25 0 0 8 23 0 0 11 25 merge_repeat chromOut
chr18 14627640 G A 999 11 11 11 11 11 11 11 11 29 0 0 9 22 0 0 17 21 0 0 14 25 0 0 14 26 0 0 17 24 0 0 11 23 0 0 11 18 0 0 14 17 @
chr18 14629380 A G 999 11 11 11 11 11 11 11 11 28 0 0 19 27 0 0 15 17 0 0 14 24 0 0 17 33 0 0 20 29 0 0 14 25 0 0 14 14 0 0 17 20 merge_repeat chromOut
chr18 14684164 T C 999 11 11 11 11 11 11 11 11 38 0 0 17 33 0 0 16 35 0 0 25 27 0 0 18 37 0 0 25 42 0 0 19 19 0 0 18 26 0 0 20 35 merge_repeat chromOut
chr18 14948374 A G 999 11 11 11 11 11 11 11 11 49 0 0 22 33 0 0 23 27 0 0 21 31 0 0 31 42 0 0 25 24 0 0 25 25 0 0 36 29 0 0 36 23 @
chr18 15159405 G T 999 11 11 11 11 11 11 11 11 24 0 0 17 11 0 0 13 16 0 0 15 12 0 1 12 17 0 0 10 17 0 0 16 24 0 0 11 13 0 1 17 11 merge_repeat chromOut
chr18 15159411 G T 999 11 11 11 11 11 11 11 11 23 0 0 17 11 0 0 13 16 0 0 12 11 0 0 10 16 0 0 8 18 0 0 17 22 0 0 14 13 0 1 17 10 merge_repeat chromOut
chr18 16134051 A C 999 11 11 11 11 11 11 11 11 40 0 0 25 30 0 0 19 25 0 0 25 16 0 0 31 24 0 0 12 28 0 0 30 20 0 0 24 32 0 0 21 25 merge_repeat chromOut
chr18 16298895 C A 999 11 11 11 11 11 11 11 11 24 0 1 10 21 0 0 15 13 0 0 16 11 0 0 20 15 0 0 21 10 0 0 17 13 0 1 11 19 0 0 14 10 merge_repeat chromOut
chr18 16322396 G T 999 11 11 11 11 11 11 11 11 25 0 0 29 9 0 0 20 8 0 0 23 18 0 0 30 10 0 0 38 10 0 0 26 7 0 0 24 11 0 0 21 4 merge_repeat chromOut nested
chr18 16322421 A G 999 11 11 11 11 11 11 11 11 29 0 0 27 8 0 0 27 9 0 0 27 12 0 0 34 14 0 0 36 11 0 0 24 7 0 0 24 7 0 0 23 6 merge_repeat chromOut nested
chr18 18644584 C T 999 11 11 11 11 11 11 11 11 59 0 0 42 25 0 0 36 33 0 0 28 31 0 0 42 40 0 0 30 37 0 0 36 26 0 0 45 34 0 0 41 34 @
chr18 18994106 A G 999 11 11 11 11 11 11 11 11 36 0 0 21 15 0 0 30 20 0 0 33 10 0 0 34 17 0 0 46 18 0 0 28 13 0 0 33 10 0 0 27 14 merge_repeat chromOut nested
chr18 19369068 G C 999 11 11 11 11 11 11 11 11 20 0 0 9 19 0 0 7 13 0 0 11 11 0 0 18 16 0 0 11 13 0 0 10 14 0 0 10 12 0 0 11 17 merge_repeat chromOut nested
chr18 19369075 G C 999 11 11 11 11 11 11 11 11 24 0 0 10 20 0 0 7 17 0 0 12 13 0 0 23 16 0 0 14 14 0 0 10 16 0 0 13 15 0 0 12 17 merge_repeat chromOut nested
chr18 19369094 G A 999 11 11 11 11 11 11 11 11 31 0 0 17 22 0 0 9 22 0 0 15 16 0 0 27 20 0 0 15 19 0 0 16 19 0 0 22 20 0 0 17 19 merge_repeat chromOut nested
chr18 19369103 G A 999 11 11 11 11 11 11 11 11 35 0 0 20 25 0 0 11 24 0 0 18 17 0 0 28 20 0 0 17 21 0 0 22 18 0 0 26 22 0 0 19 20 merge_repeat chromOut nested
chr18 19369109 A C 999 11 11 11 11 11 11 11 11 37 0 0 21 29 0 0 11 26 0 0 19 18 0 0 28 23 0 0 19 22 0 0 21 21 0 0 27 25 0 0 21 22 merge_repeat chromOut nested
chr18 21225396 T C 999 11 11 11 11 11 11 11 11 24 0 0 22 13 0 0 19 11 0 0 23 10 0 0 15 14 0 0 27 11 0 0 25 8 0 0 11 13 0 0 25 9 merge_repeat simple
chr18 21452711 T A 999 11 11 11 11 11 11 11 11 47 0 0 33 26 0 0 28 48 0 0 23 34 0 0 31 21 0 0 25 22 0 0 23 38 0 0 25 32 1 0 26 25 @
chr18 24364956 G A 999 11 11 11 11 11 11 11 11 25 0 0 22 10 0 0 28 11 0 0 22 11 0 0 33 14 0 0 23 12 0 0 28 12 0 0 25 9 0 0 19 6 merge_repeat trfMask chromOut simple
chr18 24364960 G A 999 11 11 11 11 11 11 11 11 24 0 0 24 10 0 0 28 13 0 0 22 11 0 0 33 14 0 0 23 12 0 0 28 12 0 0 25 9 0 0 18 6 merge_repeat trfMask chromOut simple
chr18 25513818 T G 999 11 11 11 11 11 11 11 11 48 0 0 29 28 0 0 36 37 0 0 28 34 0 0 34 31 0 0 31 35 0 0 24 26 0 0 25 31 0 0 27 21 @
chr18 25788324 C A 999 11 11 11 11 11 11 11 11 27 0 0 7 25 0 0 6 21 0 0 12 32 0 0 14 23 0 0 11 26 0 0 9 22 0 0 9 20 0 0 9 21 @
chr18 25788325 C A 999 11 11 11 11 11 11 11 11 27 0 0 7 25 0 0 6 21 0 0 12 32 0 0 14 23 0 0 11 26 0 0 9 22 0 0 9 20 0 0 9 20 @
chr18 25788350 C G 999 11 11 11 11 11 11 11 11 22 0 0 7 15 0 0 12 17 0 0 13 24 0 0 13 23 0 0 12 24 0 0 8 21 0 0 13 17 0 0 9 21 @
chr18 25909815 G C 999 11 11 11 11 11 11 11 11 47 0 0 26 21 0 0 26 27 0 0 28 31 0 0 37 37 0 0 27 24 0 0 28 26 0 0 26 33 0 0 32 31 @
chr18 25916109 A G 999 11 11 11 11 11 11 11 11 52 0 0 27 29 0 0 21 31 0 0 24 30 0 0 33 48 0 0 26 35 0 0 25 33 0 0 23 29 0 0 25 28 @
chr18 26050999 A G 999 11 11 11 11 11 11 11 11 45 0 0 35 25 0 0 25 20 0 0 25 31 0 0 36 38 0 0 31 26 0 0 33 24 0 0 36 28 0 0 29 31 merge_repeat chromOut
chr18 26623041 A C 999 11 11 11 11 11 11 11 11 60 0 0 43 39 0 0 41 35 0 0 34 41 0 0 30 30 0 0 29 45 0 0 41 40 0 0 34 42 0 0 35 35 @
chr18 27498983 T C 999 11 11 11 11 11 11 11 11 56 0 0 31 38 0 0 40 40 0 0 26 30 0 0 40 33 0 0 39 31 0 0 40 38 0 0 29 34 0 0 33 47 merge_repeat nested
chr18 28478320 G A 999 11 11 11 11 11 11 11 11 26 0 0 24 8 0 0 17 10 0 0 17 9 0 0 16 13 0 0 32 6 0 0 27 7 0 0 24 9 0 0 22 10 merge_repeat trfMask chromOut simple
chr18 28482760 A C 999 11 11 11 11 11 11 11 11 29 0 0 10 21 0 0 10 32 0 0 12 26 0 0 16 32 0 0 10 27 0 0 10 24 0 0 9 25 0 0 5 24 merge_repeat chromOut
chr18 29910332 G T 999 11 11 11 11 11 11 11 11 20 0 0 4 22 0 0 2 27 0 0 5 18 1 0 5 25 0 0 6 22 0 0 2 24 0 0 3 24 0 0 4 16 @
chr18 30356994 T G 999 11 11 11 11 11 11 11 11 33 0 0 26 21 0 0 23 22 0 0 14 23 0 0 32 27 0 0 27 18 0 0 20 24 0 0 21 23 0 0 22 11 merge_repeat chromOut
chr18 30461120 A T 999 11 11 11 11 11 11 11 11 53 0 0 39 29 0 0 40 22 0 0 43 26 0 0 26 27 0 0 37 42 0 0 37 32 0 0 25 28 0 0 27 32 merge_repeat chromOut
chr18 30526386 G T 999 11 11 11 11 11 11 11 11 32 0 0 20 16 0 0 20 12 0 0 22 19 0 0 24 24 0 0 27 20 0 0 25 24 0 0 26 33 0 0 22 18 merge_repeat trfMask chromOut simple
chr18 30632368 C G 999 11 11 11 11 11 11 11 11 49 0 0 36 29 0 0 38 23 0 0 31 26 0 0 38 36 0 0 39 17 0 0 33 18 0 0 30 23 0 0 26 23 @
chr18 33660420 G A 999 11 11 11 11 11 11 11 11 30 0 0 10 20 0 0 21 23 0 0 14 23 0 0 22 28 0 0 24 27 0 0 16 27 0 0 13 22 0 0 16 25 merge_repeat chromOut
chr18 33660469 A G 999 11 11 11 11 11 11 11 11 38 0 0 17 21 0 0 23 25 0 0 18 26 0 0 20 24 0 0 22 27 0 0 12 27 0 0 13 30 0 0 20 27 merge_repeat chromOut
chr18 33660486 C T 999 11 11 11 11 11 11 11 11 42 0 0 19 23 0 0 24 28 0 0 18 31 0 0 19 23 0 0 23 28 0 0 14 30 0 0 14 36 0 0 21 26 merge_repeat chromOut
chr18 33660532 C T 999 11 11 11 11 11 11 11 11 35 0 0 20 15 1 0 21 36 0 0 15 32 0 0 18 24 0 0 22 26 0 0 18 29 0 0 20 33 0 0 23 24 merge_repeat chromOut
chr18 35609747 T C 999 11 11 11 11 11 11 11 11 40 0 0 29 20 0 0 21 31 0 0 21 21 0 0 18 35 0 0 30 29 0 0 29 21 0 0 24 16 0 0 31 22 @
chr18 37058240 A T 999 11 11 11 11 11 11 11 11 55 0 1 32 39 0 1 20 39 0 0 33 35 0 1 26 28 0 0 27 30 0 0 34 28 0 0 23 32 0 0 35 32 merge_repeat chromOut nested
chr18 37484499 G C 999 11 11 11 11 11 11 11 11 52 0 0 35 27 0 0 33 29 0 0 32 40 0 0 32 20 0 0 33 34 0 0 33 39 0 0 35 22 0 0 36 36 @
chr18 40157749 A C 999 11 11 11 11 11 11 11 11 35 0 0 28 14 0 0 30 20 0 0 21 28 0 0 22 24 0 1 26 23 0 0 24 14 0 0 29 18 0 0 21 14 merge_repeat trfMask chromOut simple
chr18 41414834 T G 999 11 11 11 11 11 11 11 11 42 0 0 37 26 0 0 23 24 0 0 31 23 0 0 32 33 0 1 28 39 0 0 21 21 0 0 26 20 0 0 25 21 merge_repeat chromOut nested
chr18 41499983 A G 999 11 11 11 11 11 11 11 11 41 0 0 27 21 0 0 32 22 0 0 30 15 0 0 29 30 0 0 22 19 0 0 37 19 0 0 26 20 0 0 31 22 @
chr18 41499988 A C 999 11 11 11 11 11 11 11 11 42 0 0 28 21 0 0 33 22 0 0 32 15 0 0 30 30 0 0 24 18 0 0 37 19 0 0 25 21 0 0 32 24 @
chr18 41500005 A T 999 11 11 11 11 11 11 11 11 42 0 0 30 19 0 0 35 17 0 0 29 18 0 0 25 29 0 0 23 20 0 0 35 23 0 0 22 20 0 0 32 26 @
chr18 41500007 A C 999 11 11 11 11 11 11 11 11 42 0 0 30 19 0 0 34 18 0 0 29 18 0 0 25 29 0 0 23 20 0 0 36 23 0 0 22 20 0 0 32 26 @
chr18 41500009 A T 999 11 11 11 11 11 11 11 11 42 0 0 30 20 0 0 33 18 0 0 29 18 0 0 25 29 0 0 22 20 0 0 36 22 0 0 23 20 0 0 31 26 @
chr18 42857631 T C 999 11 11 11 11 11 11 11 11 55 0 0 39 21 0 0 38 33 0 0 30 25 0 0 31 39 0 0 36 27 0 0 28 27 0 0 32 35 0 0 39 26 @
chr18 42857675 T C 999 11 11 11 11 11 11 11 11 55 0 0 44 16 0 0 40 31 0 0 33 23 0 0 40 34 0 0 37 26 0 0 35 20 0 0 41 32 0 0 41 23 @
chr18 42857849 C T 999 11 11 11 11 11 11 11 11 49 0 0 26 43 0 0 20 46 0 0 24 31 0 0 31 36 0 0 35 34 0 0 27 36 0 0 28 34 0 0 22 27 @
chr18 43114305 A G 999 11 11 11 11 11 11 11 11 32 0 0 16 22 0 0 25 23 0 0 17 16 0 0 17 15 0 0 20 15 0 0 19 15 0 0 20 23 0 0 13 24 merge_repeat chromOut nested
chr18 43114308 G A 999 11 11 11 11 11 11 11 11 31 0 0 16 22 0 0 25 23 0 0 18 16 0 0 16 15 0 0 20 15 0 0 19 16 0 0 20 24 0 0 13 25 merge_repeat chromOut nested
chr18 43114322 G T 999 11 11 11 11 11 11 11 11 39 0 0 20 22 0 0 30 24 0 0 19 23 0 0 21 18 0 0 21 18 0 0 21 19 0 0 21 24 0 0 16 27 merge_repeat chromOut nested
chr18 43805119 A T 999 11 11 11 11 11 11 11 11 57 0 0 31 26 0 0 34 31 0 0 31 32 0 0 49 40 0 0 36 25 0 0 36 40 0 0 32 34 0 0 42 24 @
chr18 43835581 G T 999 11 11 11 11 11 11 11 11 30 0 0 21 18 0 0 19 17 0 0 25 20 0 0 28 15 0 0 30 12 0 0 12 18 0 0 18 20 0 0 20 17 merge_repeat chromOut
chr18 43835582 G T 999 11 11 11 11 11 11 11 11 30 0 0 21 18 0 0 19 17 0 0 25 20 0 0 28 15 0 0 30 12 0 0 12 18 0 0 18 20 0 0 19 17 merge_repeat chromOut
chr18 48411162 A C 999 11 11 11 11 11 11 11 11 50 0 0 30 41 0 0 26 27 0 0 31 34 0 0 28 35 0 0 32 35 0 0 26 24 0 0 34 39 0 0 28 37 @
chr18 49300599 T A 999 11 11 11 11 11 11 11 11 35 0 0 20 15 0 0 39 15 0 0 37 24 0 0 24 29 0 0 36 16 0 0 33 22 0 0 32 23 0 0 36 26 merge_repeat chromOut
chr18 49446540 T A 999 11 11 11 11 11 11 11 11 37 0 0 26 23 0 0 37 25 0 0 28 32 0 0 26 38 0 0 13 36 0 0 12 25 0 0 22 30 0 0 28 31 merge_repeat trfMask simple
chr18 49934757 G C 999 11 11 11 11 11 11 11 11 64 0 0 29 59 0 0 44 47 0 0 37 45 0 0 38 48 0 0 32 32 0 0 39 37 0 0 38 39 0 0 41 38 merge_repeat simple
chr18 50030826 G A 999 11 11 11 11 11 11 11 11 45 0 0 29 28 0 0 41 28 0 0 18 27 0 0 30 42 0 0 28 23 0 0 38 32 0 0 32 25 0 0 21 38 @
chr18 50156664 A G 999 11 11 11 11 11 11 11 11 24 0 0 18 12 0 0 12 13 0 0 24 17 0 0 25 30 0 0 13 11 0 0 16 13 0 0 12 15 0 0 14 13 merge_repeat chromOut
chr18 50220345 T A 999 11 11 11 11 11 11 11 11 30 0 0 14 16 0 0 24 27 0 0 30 22 0 0 34 22 0 0 21 22 0 0 18 15 0 0 24 19 0 0 32 16 @
chr18 50526896 T G 999 11 11 11 11 11 11 11 11 46 0 0 27 41 0 0 27 39 0 0 19 33 0 0 36 27 0 0 34 29 0 0 28 24 0 0 21 25 0 0 26 22 merge_repeat trfMask chromOut simple
chr18 50609003 A G 999 11 11 11 11 11 11 11 11 57 0 0 39 36 0 0 32 33 0 0 45 27 0 0 30 27 0 0 27 36 0 0 35 24 0 0 38 34 0 0 36 27 merge_repeat chromOut
chr18 51722504 T G 999 11 11 11 11 11 11 11 11 21 0 0 23 7 0 0 16 5 0 0 15 8 0 0 20 11 0 0 20 17 0 0 15 15 0 0 17 20 0 0 10 12 merge_repeat trfMask chromOut simple nested
chr18 53338198 G A 999 11 11 11 11 11 11 11 11 57 0 0 30 27 0 0 37 36 0 0 35 29 0 0 42 36 0 0 30 33 0 1 31 25 1 0 40 36 0 0 31 39 merge_repeat chromOut
chr18 53464777 A G 999 11 11 11 11 11 11 11 11 30 0 0 26 19 0 0 23 23 0 0 28 26 0 0 33 20 0 0 29 19 0 0 17 13 0 0 27 18 0 0 19 12 merge_repeat chromOut
chr18 55789618 A G 999 11 11 11 11 11 11 11 11 47 0 0 28 34 0 0 30 28 0 0 24 23 0 0 27 43 0 0 48 30 0 0 34 36 0 0 34 27 0 0 36 30 merge_repeat chromOut nested
chr18 56840942 A G 999 11 11 11 11 11 11 11 11 43 0 1 32 23 0 0 34 26 0 0 25 21 0 0 36 29 0 0 25 34 0 0 32 30 0 2 28 35 0 0 21 22 merge_repeat chromOut
chr18 58280828 T G 999 11 11 11 11 11 11 11 11 33 0 0 29 11 0 0 27 14 0 0 21 17 0 0 35 18 0 0 33 9 0 0 30 13 0 0 25 8 0 0 25 10 merge_repeat chromOut
chr18 59552979 G T 999 11 11 11 11 11 11 11 11 29 0 0 12 28 0 0 13 22 0 0 16 17 0 0 17 20 0 0 23 21 0 0 12 19 0 0 20 25 0 0 10 19 merge_repeat chromOut nested
chr18 59777594 C T 999 11 11 11 11 11 11 11 11 34 0 0 29 7 0 0 29 12 0 0 26 20 0 0 31 19 0 0 32 17 0 0 32 25 0 0 24 10 0 0 40 24 merge_repeat chromOut nested
chr18 60256338 T G 999 11 11 11 11 11 11 11 11 43 0 0 23 24 0 0 28 24 0 1 22 31 0 0 26 38 0 0 34 25 0 0 19 24 0 0 26 22 0 0 31 26 merge_repeat chromOut nested segmentDup
chr18 61238126 T C 999 11 11 11 11 11 11 11 11 47 0 0 26 27 0 0 25 30 0 0 32 29 0 0 32 30 0 0 31 36 0 0 24 27 0 0 33 26 0 0 21 26 merge_repeat chromOut nested
chr18 61861594 T C 999 11 11 11 11 11 11 11 11 50 0 0 35 31 0 0 29 35 0 0 33 39 0 0 37 33 0 0 32 38 0 0 28 27 0 0 19 32 0 0 27 23 merge_repeat chromOut nested
chr18 62077366 T G 999 11 11 11 11 11 11 11 11 39 0 0 16 25 0 0 14 25 0 0 22 23 0 0 21 29 0 0 18 25 0 0 16 30 0 0 16 25 0 0 15 25 @
chr18 62077384 C G 999 11 11 11 11 11 11 11 11 37 0 0 15 24 0 0 14 26 0 0 19 25 0 0 19 29 0 0 22 20 0 0 16 24 0 0 15 25 0 0 16 21 merge_repeat chromOut simple
chr18 62077401 G A 999 11 11 11 11 11 11 11 11 31 0 0 16 15 0 0 12 19 0 0 19 19 0 0 21 21 0 0 23 18 0 0 17 16 0 0 17 23 0 0 15 17 merge_repeat trfMask chromOut simple
chr18 62077404 G A 999 11 11 11 11 11 11 11 11 31 0 0 16 15 0 0 12 19 0 0 17 19 0 0 21 20 0 0 23 18 0 0 17 15 0 0 17 23 0 0 15 17 merge_repeat trfMask chromOut simple
chr18 62077418 G A 999 11 11 11 11 11 11 11 11 25 0 0 12 14 0 0 11 14 0 0 16 18 0 0 20 18 0 0 23 19 0 0 17 14 0 0 14 20 0 0 14 16 merge_repeat trfMask chromOut simple
chr18 62077425 G A 999 11 11 11 11 11 11 11 11 23 0 0 9 14 0 0 11 18 0 0 17 18 0 0 20 16 0 0 26 20 0 0 17 17 0 0 11 19 0 0 16 13 merge_repeat trfMask chromOut simple
chr18 62092780 T C 999 11 11 11 11 11 11 11 11 38 0 0 6 36 0 0 8 37 0 0 7 31 0 0 10 39 0 0 13 37 0 0 12 36 0 0 12 32 0 0 7 38 merge_repeat nested
chr18 62779984 A C 999 11 11 11 11 11 11 11 11 37 0 0 25 24 0 1 24 29 0 1 21 24 0 1 21 22 0 0 27 14 0 0 22 26 0 0 19 18 0 0 18 25 merge_repeat chromOut
chr18 63173445 T A 999 11 11 11 11 11 11 11 11 22 0 1 12 25 0 0 4 19 0 0 6 26 0 0 11 30 0 0 12 33 0 0 9 32 0 0 5 17 0 0 7 33 merge_repeat chromOut nested
chr18 63725970 C G 999 11 11 11 11 11 11 11 11 47 0 0 28 19 0 0 32 28 0 0 29 34 0 0 38 29 0 0 27 25 0 0 27 28 0 0 31 25 0 0 31 28 merge_repeat nested
chr18 63925933 G T 999 11 11 11 11 11 11 11 11 50 0 0 26 24 0 0 33 25 0 0 31 22 0 0 37 36 0 0 33 35 0 0 32 25 0 0 33 32 0 0 35 28 @
chr18 64457132 C T 999 11 11 11 11 11 11 11 11 59 0 0 31 33 0 0 33 34 0 0 29 30 0 0 26 42 0 0 29 33 0 0 36 35 0 0 36 30 0 0 29 30 @
chr18 64488336 C G 999 11 11 11 11 11 11 11 11 50 0 0 26 24 0 0 26 32 0 0 19 33 0 0 35 35 0 0 30 30 0 0 25 31 0 0 24 32 0 0 29 41 @
chr18 66201630 C A 999 11 11 11 11 11 11 11 11 21 0 0 15 17 0 0 18 14 0 0 7 26 0 0 20 13 0 0 21 35 0 0 15 17 0 0 8 20 0 0 15 6 merge_repeat chromOut
chr18 67329633 T C 999 11 11 11 11 11 11 11 11 26 0 0 15 11 0 0 24 11 0 0 17 13 0 0 26 16 0 0 27 19 0 0 19 11 0 0 19 12 0 0 17 22 @
chr18 69612458 A C 999 11 11 11 11 11 11 11 11 32 0 0 9 28 0 0 19 26 0 0 9 24 0 0 18 41 0 0 22 32 0 0 18 19 0 0 13 19 0 0 13 25 @
chr18 69659520 G T 999 11 11 11 11 11 11 11 11 64 0 0 39 52 0 0 42 44 0 0 53 39 0 0 40 38 0 0 36 42 0 0 32 39 0 0 35 40 0 0 27 37 @
chr18 69659522 T C 999 11 11 11 11 11 11 11 11 64 0 0 38 52 0 0 43 44 0 0 52 40 0 0 40 37 0 0 36 42 0 0 32 39 0 0 35 40 0 0 27 37 @
chr18 70445180 T C 999 11 11 11 11 11 11 11 11 41 0 0 22 34 0 0 29 28 0 0 24 31 0 0 27 27 0 0 36 33 0 0 35 27 0 0 23 22 0 0 21 20 @
chr18 70739421 A G 999 11 11 11 11 11 11 11 11 40 0 0 18 31 0 0 21 33 0 0 30 40 0 0 27 34 0 0 30 25 0 0 28 17 0 0 21 19 0 0 19 22 merge_repeat chromOut nested
chr18 70770017 T C 999 11 11 11 11 11 11 11 11 37 0 0 20 17 0 0 16 25 0 0 21 23 0 0 17 24 0 0 22 30 0 0 21 21 0 0 29 30 0 0 20 21 @
chr18 70934669 T G 999 11 11 11 11 11 11 11 11 28 0 0 13 15 0 0 16 29 0 0 12 25 0 2 25 17 0 0 15 18 0 0 23 17 0 0 20 19 0 0 21 17 merge_repeat chromOut
chr18 71079716 G T 999 11 11 11 11 11 11 11 11 34 0 0 19 19 1 0 19 19 0 0 15 21 1 0 23 18 0 0 20 14 0 0 11 24 0 2 23 19 0 0 14 25 merge_repeat chromOut
chr18 72148418 G T 999 11 11 11 11 11 11 11 11 27 0 0 22 14 0 0 21 17 0 0 25 9 0 0 17 16 0 0 18 13 0 0 24 18 0 0 17 10 0 0 28 12 merge_repeat trfMask chromOut simple
chr18 72696444 A G 999 11 11 11 11 11 11 11 11 52 0 0 37 37 0 0 34 34 0 0 35 29 0 0 40 39 0 0 35 25 0 0 22 36 0 0 27 25 0 0 29 34 @
chr18 72696445 T A 999 11 11 11 11 11 11 11 11 52 0 0 37 37 0 0 35 34 0 0 35 29 0 0 40 39 0 0 35 25 0 0 22 36 0 0 27 25 0 0 29 34 @
chr18 72696452 G T 999 11 11 11 11 11 11 11 11 53 0 0 42 40 0 0 37 34 0 0 43 31 0 0 44 40 0 0 40 27 0 0 25 38 0 0 26 27 0 0 31 38 @
chr18 74117720 T G 999 11 11 11 11 11 11 11 11 48 0 0 23 27 0 0 25 35 0 0 18 35 0 0 27 21 0 0 27 29 0 0 34 19 0 0 26 30 0 0 37 28 @
chr18 74821479 A G 999 11 11 11 11 11 11 11 11 21 0 0 25 8 0 0 34 7 0 0 28 1 0 0 29 3 0 0 14 7 0 0 32 5 0 0 26 4 0 0 29 3 merge_repeat chromOut nested
chr18 75306412 T C 999 11 11 11 11 11 11 11 11 22 0 0 24 9 0 0 21 7 0 0 18 11 0 0 23 9 0 0 14 12 0 0 24 6 0 0 19 10 0 0 20 2 merge_repeat chromOut
chr18 76048852 T G 999 11 11 11 11 11 11 11 11 52 0 0 29 23 0 0 28 27 0 0 29 23 0 0 33 32 0 0 37 21 0 0 34 21 0 0 32 20 0 0 34 24 merge_repeat chromOut nested
chr18 76479545 T C 999 11 11 11 11 11 11 11 11 31 0 0 19 12 0 0 32 19 0 0 35 17 0 0 29 26 0 0 20 19 0 0 30 17 0 0 31 11 0 0 23 8 @
chr18 76908692 A C 999 11 11 11 11 11 11 11 11 51 0 0 30 27 0 0 25 31 0 0 27 24 0 0 30 27 0 0 33 27 0 0 27 35 0 0 34 22 0 0 29 25 @
chr18 77144235 T C 999 11 11 11 11 11 11 11 11 24 0 0 16 17 0 0 21 18 0 0 17 15 0 0 12 12 0 0 11 13 0 0 12 18 0 0 11 14 0 0 17 15 @
chr18 77701445 C A 999 11 11 11 11 11 11 11 11 30 0 0 11 32 0 0 9 21 0 0 21 25 0 0 17 38 0 0 18 21 0 0 14 24 0 0 13 34 0 0 11 23 merge_repeat chromOut
chr18 77701630 C A 999 11 11 11 11 11 11 11 11 22 0 0 16 12 0 0 12 17 0 0 15 18 0 0 14 15 0 0 11 27 0 0 14 11 0 0 8 14 0 0 8 19 merge_repeat chromOut
chr18 80860022 A G 999 11 11 11 11 11 11 11 11 57 0 0 30 27 0 0 29 34 0 0 36 39 0 0 32 32 0 0 28 31 0 0 28 31 0 0 33 30 0 0 36 30 @
chr18 81120818 G C 999 11 11 11 11 11 11 11 11 42 0 0 19 28 0 0 22 20 0 0 20 42 0 0 29 27 0 0 26 29 0 0 27 24 0 0 26 24 0 0 23 20 @
chr18 81212140 A G 999 11 11 11 11 11 11 11 11 30 0 0 20 21 0 0 20 28 0 0 12 18 0 0 28 20 0 0 36 24 0 0 28 33 0 0 24 34 0 0 34 25 @
chr18 81570499 G A 999 11 11 11 11 11 11 11 11 34 0 0 17 21 0 0 9 25 0 0 17 28 0 0 17 21 0 0 18 26 0 0 11 31 0 0 9 25 0 0 16 28 @
chr18 82160600 G C 999 11 11 11 11 11 11 11 11 30 0 0 27 17 0 0 32 15 0 0 35 20 0 0 32 17 0 0 32 13 0 0 17 13 0 0 25 21 0 0 29 17 merge_repeat simple
chr18 82161519 G T 999 11 11 11 11 11 11 11 11 147 0 0 120 78 2 0 130 66 1 0 128 51 1 0 107 59 0 0 127 63 1 0 103 43 0 0 102 56 1 0 114 56 merge_repeat chromOut simple
chr18 82162252 T C 999 11 11 11 11 11 11 11 11 28 0 0 16 13 0 0 18 10 0 0 24 12 1 0 25 25 0 0 11 18 0 0 16 16 0 0 16 16 0 0 16 12 merge_repeat simple
chr18 82169979 A G 999 11 11 11 11 11 11 11 11 82 0 0 86 16 1 1 90 13 0 0 80 18 0 1 95 11 3 0 87 10 1 0 68 13 1 0 73 22 1 0 94 12 merge_repeat simple
chr18 83061768 A G 999 11 11 11 11 11 11 11 11 38 0 0 21 23 0 0 21 33 0 0 17 21 0 0 31 21 0 0 29 24 0 0 28 24 0 0 26 22 0 0 21 23 @
chr18 84947472 G A 999 11 11 11 11 11 11 11 11 49 0 0 39 19 0 0 25 32 0 0 26 26 0 0 31 33 0 0 37 28 0 0 29 27 0 0 24 30 0 0 28 21 @
chr18 87281816 T C 999 11 11 11 11 11 11 11 11 52 0 0 30 31 0 0 31 30 0 0 26 31 0 0 21 31 0 0 25 32 0 0 18 35 0 0 29 34 0 0 25 36 @
chr18 88778468 G C 999 11 11 11 11 11 11 11 11 38 0 0 36 20 0 0 29 14 0 0 28 21 0 0 36 20 0 0 35 25 0 0 19 19 0 0 34 16 0 0 38 10 @
chr18 88778478 A C 999 11 11 11 11 11 11 11 11 37 0 0 34 22 0 0 27 16 0 0 28 26 0 0 37 20 0 0 37 25 0 0 17 20 0 0 30 19 0 0 37 14 @
chr18 89204532 C A 999 11 11 11 11 11 11 11 11 25 0 0 16 21 0 0 17 12 0 0 20 18 0 1 22 13 0 0 18 13 0 0 19 9 0 0 15 10 0 0 15 13 @