chr	position	ref	alt	quality	samtools_GT_RAW	min_depth	1RF	1RR	1AF	1AR	2RF	2RR	2AF	2AR	3RF	3RR	3AF	3AR	4RF	4RR	4AF	4AR	5RF	5RR	5AF	5AR	6RF	6RR	6AF	6AR	7RF	7RR	7AF	7AR	8RF	8RR	8AF	8AR	merge_repeat	trfMask	chromOut	simple	nested	segmentDup
chr16	3122681	T	C	999	11 11 11 11 11 11 11 11	101	0	0	110	10	0	0	111	18	0	0	110	18	0	0	122	11	0	0	93	21	0	0	109	12	0	0	94	15	0	1	86	14	merge_repeat					segmentDup
chr16	3139271	G	A	999	11 11 11 11 11 11 11 11	64	2	0	59	19	0	0	54	20	1	0	74	29	0	0	69	24	1	0	64	25	0	0	48	16	0	0	66	18	0	0	61	15	merge_repeat		chromOut			segmentDup
chr16	3139272	T	G	999	11 11 11 11 11 11 11 11	64	2	0	59	19	0	0	54	20	1	0	74	29	0	0	69	24	1	0	64	25	0	0	48	16	0	0	66	18	0	0	61	15	merge_repeat		chromOut			segmentDup
chr16	3139284	C	T	999	11 11 11 11 11 11 11 11	68	2	0	60	19	0	0	56	20	1	0	80	29	0	0	72	24	1	0	68	25	0	0	52	16	0	0	69	18	0	0	63	15	merge_repeat		chromOut			segmentDup
chr16	3139397	T	G	562	11 11 11 11 11 11 11 11	21	0	0	7	15	0	0	8	13	0	0	19	14	1	0	27	20	0	0	23	19	0	0	29	25	0	0	12	24	0	0	16	19	merge_repeat		chromOut			segmentDup
chr16	3139419	A	G	553	11 11 11 11 11 11 11 11	25	0	0	7	23	0	0	8	17	0	0	18	21	1	0	28	33	0	0	23	30	0	0	28	35	0	0	13	29	0	0	16	32	merge_repeat					segmentDup
chr16	3139457	A	G	509	11 11 11 11 11 11 11 11	21	0	0	4	22	0	0	3	18	0	0	7	21	1	0	14	34	0	0	6	30	0	0	8	35	0	0	7	26	0	1	7	31	merge_repeat					segmentDup
chr16	3173828	C	T	999	11 11 11 11 11 11 11 11	143	0	0	89	110	0	0	81	89	0	0	62	90	0	0	74	69	0	0	85	99	0	0	89	75	1	0	74	82	0	0	86	109	merge_repeat					segmentDup
chr16	3173847	A	T	999	11 11 11 11 11 11 11 11	159	0	0	95	116	0	0	87	94	0	0	78	92	0	0	90	69	0	0	100	99	0	0	107	76	1	0	89	84	0	0	93	112	merge_repeat					segmentDup
chr16	3173859	C	A	999	11 11 11 11 11 11 11 11	161	0	0	97	110	0	0	93	85	0	0	80	85	0	0	97	64	0	0	108	86	0	0	113	67	1	0	94	77	0	0	92	103	merge_repeat					segmentDup
chr16	3173860	C	T	999	11 11 11 11 11 11 11 11	161	0	0	97	110	0	0	94	85	0	0	80	85	0	0	97	64	0	0	108	86	0	0	113	67	1	0	94	77	0	0	94	103	merge_repeat					segmentDup
chr16	3174113	C	T	999	11 11 11 11 11 11 11 11	34	0	0	7	38	0	0	8	38	0	0	10	33	0	0	9	30	0	0	6	38	0	0	11	23	0	0	7	29	0	0	6	31	merge_repeat					segmentDup
chr16	3174123	C	T	999	11 11 11 11 11 11 11 11	34	0	0	7	39	0	0	8	38	0	0	10	34	0	0	9	30	0	0	6	38	0	0	11	23	0	0	7	29	0	0	6	31	merge_repeat					segmentDup
chr16	3174164	C	T	999	11 11 11 11 11 11 11 11	35	0	0	7	42	0	0	8	42	0	0	10	36	0	0	9	30	0	0	6	41	0	0	11	24	0	0	7	34	0	0	6	35	merge_repeat		chromOut			segmentDup
chr16	3174231	C	T	999	11 11 11 11 11 11 11 11	28	0	0	7	41	0	0	9	41	0	0	10	30	0	0	5	29	0	0	6	34	0	0	7	21	0	0	5	30	0	0	4	32	merge_repeat		chromOut			segmentDup
chr16	3174232	A	T	999	11 11 11 11 11 11 11 11	28	0	0	7	41	0	0	9	41	0	0	10	30	0	0	5	29	0	0	6	34	0	0	7	21	0	0	5	30	0	0	4	32	merge_repeat		chromOut			segmentDup
chr16	3303264	G	A	999	11 11 11 11 11 11 11 11	60	1	1	60	7	0	0	74	5	0	0	54	12	0	1	56	18	0	0	59	3	0	0	50	10	0	0	54	6	1	0	69	2	merge_repeat					segmentDup
chr16	3303283	A	G	999	11 11 11 11 11 11 11 11	59	1	1	61	6	0	0	75	4	0	0	53	11	0	1	54	17	0	0	60	3	0	0	49	10	0	0	53	6	1	0	66	2	merge_repeat					segmentDup
chr16	3303310	G	A	999	11 11 11 11 11 11 11 11	53	1	0	55	5	1	1	67	3	0	0	49	11	1	1	49	16	0	0	61	2	0	0	48	8	1	0	47	5	1	0	63	2	merge_repeat					segmentDup
chr16	3337995	A	G	999	11 11 11 11 11 11 11 11	98	0	1	41	74	0	0	40	83	0	0	47	66	0	0	41	57	0	0	45	60	0	0	47	55	0	0	38	72	0	0	44	93	merge_repeat		chromOut			segmentDup
chr16	3338055	T	C	999	11 11 11 11 11 11 11 11	64	0	1	26	37	0	0	32	41	0	0	36	49	0	0	37	39	0	0	43	45	0	0	42	40	0	0	30	44	0	0	31	59	merge_repeat		chromOut			segmentDup
chr16	3338061	G	A	999	11 11 11 11 11 11 11 11	57	0	1	22	34	0	0	32	41	0	0	35	47	0	0	35	34	0	0	41	43	0	0	40	40	0	0	25	41	0	0	29	54	merge_repeat		chromOut			segmentDup
chr16	3341023	T	C	999	11 11 11 11 11 11 11 11	20	0	0	21	3	0	0	20	4	0	0	25	5	0	0	14	6	0	0	14	8	0	0	16	8	0	0	13	11	0	1	16	7	merge_repeat		chromOut		nested	segmentDup
chr16	4949041	G	A	999	11 11 11 11 11 11 11 11	32	0	0	12	20	0	0	18	36	0	0	11	27	0	0	21	40	0	0	21	29	0	0	19	30	0	0	19	29	0	0	21	30	merge_repeat		chromOut
chr16	4949205	G	T	999	11 11 11 11 11 11 11 11	25	0	0	13	23	0	0	9	18	0	0	20	21	0	0	15	22	0	0	18	22	0	0	12	13	0	0	18	29	0	0	9	23	merge_repeat		chromOut
chr16	4949241	C	A	999	11 11 11 11 11 11 11 11	26	0	0	14	20	0	0	10	25	0	0	20	20	0	0	15	27	0	0	12	22	0	0	13	13	0	0	17	29	0	0	12	27	merge_repeat		chromOut
chr16	4949245	A	C	999	11 11 11 11 11 11 11 11	26	0	0	14	20	0	0	10	24	0	0	20	19	0	0	15	26	0	0	12	23	0	0	13	13	0	0	17	30	0	0	12	27	merge_repeat		chromOut
chr16	4949246	A	C	999	11 11 11 11 11 11 11 11	26	0	0	14	20	0	0	10	25	0	0	20	20	0	0	15	27	0	0	12	23	0	0	13	13	0	0	16	30	0	0	12	27	merge_repeat		chromOut
chr16	4949251	G	T	999	11 11 11 11 11 11 11 11	26	0	0	14	20	0	0	10	25	0	0	20	20	0	0	15	27	0	0	12	23	0	0	13	13	0	0	17	30	0	0	12	27	merge_repeat		chromOut
chr16	4949252	G	T	999	11 11 11 11 11 11 11 11	26	0	0	14	20	0	0	10	25	0	0	20	20	0	0	15	27	0	0	12	23	0	0	13	13	0	0	17	30	0	0	12	27	merge_repeat		chromOut
chr16	4949267	G	T	999	11 11 11 11 11 11 11 11	28	0	0	19	23	0	0	14	29	0	0	25	21	0	0	18	31	0	0	12	26	0	0	13	15	0	0	20	33	0	0	12	31	merge_repeat		chromOut
chr16	4949285	G	A	999	11 11 11 11 11 11 11 11	34	0	0	27	24	0	0	14	27	0	0	25	18	0	0	19	30	0	0	13	27	0	0	18	16	0	0	21	31	0	0	14	25
chr16	4949306	G	A	999	11 11 11 11 11 11 11 11	31	0	0	30	23	0	0	15	21	0	0	24	11	0	0	21	25	0	0	13	23	0	0	19	12	0	0	22	24	0	0	12	23
chr16	5840073	G	T	999	11 11 11 11 11 11 11 11	54	0	0	29	33	0	0	40	39	0	0	32	27	0	0	40	25	0	0	30	28	0	0	23	36	0	0	31	26	0	0	28	26	merge_repeat		chromOut
chr16	6277276	A	G	999	11 11 11 11 11 11 11 11	44	0	0	20	26	0	0	20	25	0	0	17	30	0	0	27	32	0	0	30	42	0	0	21	27	0	0	18	26	0	0	21	30	merge_repeat				nested
chr16	6662805	T	C	999	11 11 11 11 11 11 11 11	46	0	0	39	30	0	0	12	34	0	0	25	27	0	0	32	32	0	0	26	35	0	0	25	39	0	0	33	29	0	0	17	29
chr16	7561628	C	T	999	11 11 11 11 11 11 11 11	25	0	0	19	16	0	0	13	12	0	0	19	9	0	0	27	16	0	0	19	25	0	0	15	18	0	0	13	25	0	0	21	9	merge_repeat		chromOut
chr16	7561767	A	C	999	11 11 11 11 11 11 11 11	25	0	0	9	16	0	0	15	16	0	0	24	22	0	0	15	27	0	0	13	36	0	0	15	23	0	0	17	12	0	0	14	24
chr16	7561827	T	C	999	11 11 11 11 11 11 11 11	29	0	0	10	20	0	0	14	18	0	0	28	24	0	0	8	21	0	0	16	33	0	0	16	16	0	0	22	11	0	0	22	22
chr16	7561858	T	C	999	11 11 11 11 11 11 11 11	32	0	0	13	19	0	0	20	13	0	0	29	19	0	0	11	22	0	0	16	25	0	0	17	16	0	0	21	11	0	0	21	21	merge_repeat		chromOut	simple
chr16	8247791	G	C	999	11 11 11 11 11 11 11 11	33	0	0	6	29	0	0	10	23	0	0	16	30	0	0	15	28	0	0	14	25	0	0	14	27	0	0	14	28	0	0	9	29	merge_repeat		chromOut
chr16	8738359	A	C	999	11 11 11 11 11 11 11 11	20	0	0	12	17	0	0	10	21	0	0	3	18	0	0	5	23	0	0	7	13	0	0	6	20	0	0	12	26	0	0	8	21
chr16	8996461	T	C	999	11 11 11 11 11 11 11 11	25	0	0	21	28	0	0	16	24	0	0	17	22	0	0	35	19	0	0	16	16	0	0	7	18	0	0	22	29	0	0	19	13
chr16	9212865	G	C	999	11 11 11 11 11 11 11 11	44	0	0	27	17	0	0	33	29	0	0	30	32	0	0	34	40	0	0	21	31	0	0	23	27	0	0	32	39	0	0	24	32
chr16	10822651	A	T	999	11 11 11 11 11 11 11 11	20	0	0	17	15	0	0	14	16	0	0	15	7	0	0	17	11	0	0	16	14	0	0	13	10	0	0	13	10	0	0	10	10	merge_repeat	trfMask	chromOut	simple
chr16	11162678	G	A	999	11 11 11 11 11 11 11 11	54	0	0	24	33	0	0	19	35	0	0	21	40	0	0	20	36	0	0	24	31	0	0	20	36	0	0	18	40	0	0	16	42
chr16	12472234	T	C	999	11 11 11 11 11 11 11 11	51	0	0	27	24	0	0	27	26	0	0	31	21	0	0	28	28	0	0	38	28	0	0	30	29	0	0	34	25	0	0	33	28
chr16	12558768	T	G	999	11 11 11 11 11 11 11 11	20	0	0	19	10	0	0	19	8	0	0	12	10	0	0	28	5	0	0	14	6	0	0	27	6	0	0	22	7	0	0	15	16	merge_repeat		chromOut		nested
chr16	13369047	A	G	999	11 11 11 11 11 11 11 11	50	0	0	28	41	0	0	28	30	0	0	22	33	0	0	31	29	0	0	23	27	0	0	22	29	0	0	32	28	0	0	28	26	merge_repeat		chromOut		nested
chr16	13574994	C	A	999	11 11 11 11 11 11 11 11	29	0	0	37	5	0	0	31	14	0	0	32	6	0	0	40	9	0	0	26	18	0	0	19	10	0	0	33	9	0	0	24	16
chr16	14233397	T	C	999	11 11 11 11 11 11 11 11	47	0	0	30	36	0	0	29	38	0	0	28	39	0	0	28	39	0	0	30	33	0	0	29	34	0	0	29	18	0	0	33	23
chr16	14253910	T	C	999	11 11 11 11 11 11 11 11	41	0	0	27	27	0	0	39	24	0	0	21	27	0	0	27	27	0	0	27	28	0	0	28	22	0	0	25	25	0	0	20	21
chr16	17319548	C	A	999	11 11 11 11 11 11 11 11	22	0	0	14	12	0	0	15	8	0	0	14	10	0	0	23	13	0	0	20	14	0	0	21	11	0	0	22	5	0	0	18	4
chr16	17615159	G	T	999	11 11 11 11 11 11 11 11	41	0	0	27	21	0	0	23	18	0	0	28	20	0	0	39	21	0	0	35	24	0	0	28	14	0	0	26	19	0	0	31	14	merge_repeat		chromOut		nested
chr16	18063246	G	A	999	11 11 11 11 11 11 11 11	39	0	0	32	21	0	0	27	22	0	0	30	12	0	0	33	16	0	0	31	10	0	0	32	8	0	0	29	10	0	0	32	9
chr16	18191744	T	A	999	11 11 11 11 11 11 11 11	35	0	0	17	20	0	0	13	22	0	0	21	16	0	0	27	33	0	0	17	26	0	0	21	19	0	0	16	25	0	0	13	22	merge_repeat	trfMask	chromOut	simple
chr16	18364929	G	T	999	11 11 11 11 11 11 11 11	21	0	0	14	26	0	0	18	23	0	0	14	17	0	0	17	19	0	0	11	20	0	0	20	14	0	0	16	17	0	0	11	10	merge_repeat		chromOut		nested
chr16	18364933	A	T	999	11 11 11 11 11 11 11 11	21	0	0	14	26	0	0	18	23	0	0	14	17	0	0	17	19	0	0	11	20	0	0	20	14	0	0	16	18	0	0	11	10	merge_repeat		chromOut		nested
chr16	18364939	G	T	999	11 11 11 11 11 11 11 11	20	0	0	14	25	0	0	19	24	0	0	15	17	0	0	19	21	0	0	12	19	0	0	21	15	0	0	16	17	0	0	11	9	merge_repeat		chromOut		nested
chr16	18364956	G	T	999	11 11 11 11 11 11 11 11	21	0	0	15	24	0	0	20	24	0	0	19	15	0	0	24	18	0	0	14	18	0	0	21	15	0	0	19	15	0	0	13	8	merge_repeat		chromOut		nested
chr16	18366141	G	T	999	11 11 11 11 11 11 11 11	32	0	0	18	22	0	0	19	15	0	0	23	14	0	0	22	13	0	0	20	15	0	0	19	18	0	0	30	11	0	0	19	13	merge_repeat		chromOut		nested
chr16	18395655	C	G	999	11 11 11 11 11 11 11 11	25	0	0	15	21	0	0	17	19	0	0	12	14	0	0	19	22	0	0	16	15	0	0	12	17	0	0	7	18	0	0	13	12
chr16	18395656	G	C	999	11 11 11 11 11 11 11 11	25	0	0	15	21	0	0	17	19	0	0	12	14	0	0	19	22	0	0	16	15	0	0	12	17	0	0	7	19	0	0	13	12
chr16	18395803	A	C	999	11 11 11 11 11 11 11 11	29	0	0	19	10	0	0	17	26	0	0	24	22	0	0	32	32	0	0	23	22	0	0	32	14	0	0	26	19	0	0	13	18
chr16	18395858	C	G	999	11 11 11 11 11 11 11 11	23	0	0	13	16	0	0	20	21	0	0	24	19	0	0	35	23	0	0	24	22	0	0	20	12	0	0	20	11	0	0	10	13
chr16	18395875	A	T	999	11 11 11 11 11 11 11 11	26	0	0	12	14	0	0	16	19	0	0	25	16	0	0	35	22	0	0	26	21	0	0	22	11	0	0	24	10	0	0	11	15
chr16	18446808	C	G	999	11 11 11 11 11 11 11 11	42	0	0	15	46	0	0	19	39	0	0	16	37	0	0	24	24	0	0	16	35	0	0	19	25	0	0	19	36	0	0	20	22	merge_repeat		chromOut
chr16	18446852	C	T	999	11 11 11 11 11 11 11 11	39	0	0	20	36	0	0	20	37	0	0	17	33	0	0	22	19	0	0	25	30	0	0	20	19	0	0	21	34	0	0	19	20	merge_repeat		chromOut
chr16	18446857	A	T	999	11 11 11 11 11 11 11 11	37	0	0	21	32	0	0	20	31	0	0	17	34	0	0	23	19	0	0	26	24	0	0	19	18	0	0	20	33	0	0	19	18	merge_repeat		chromOut
chr16	18488892	G	C	999	11 11 11 11 11 11 11 11	29	0	0	10	29	0	0	10	19	0	0	6	27	0	0	5	29	0	0	14	23	0	0	9	22	0	0	10	20	0	0	10	26	merge_repeat		chromOut		nested
chr16	18488929	G	A	999	11 11 11 11 11 11 11 11	27	0	0	8	33	0	0	7	22	0	0	3	30	0	0	3	24	0	0	6	26	0	0	3	27	0	0	5	24	0	0	2	29	merge_repeat		chromOut		nested
chr16	18576418	T	C	999	11 11 11 11 11 11 11 11	60	1	0	32	27	0	0	37	25	0	0	31	34	0	0	30	50	0	0	41	41	0	0	31	37	0	0	42	37	0	0	42	26	merge_repeat		chromOut		nested
chr16	18576438	T	C	999	11 11 11 11 11 11 11 11	58	0	0	28	30	0	0	30	29	0	0	26	35	0	0	29	47	0	0	36	43	0	0	29	33	0	0	41	40	0	0	36	32	merge_repeat		chromOut		nested
chr16	18576445	C	A	999	11 11 11 11 11 11 11 11	55	0	0	27	28	0	0	31	27	0	0	26	35	0	0	31	47	0	0	38	42	0	0	29	33	0	0	40	42	1	0	34	34	merge_repeat		chromOut		nested
chr16	18666389	G	T	999	11 11 11 11 11 11 11 11	37	0	0	18	21	0	0	20	36	0	0	22	23	0	0	29	36	0	0	29	15	0	0	16	21	0	0	33	27	0	0	23	27	merge_repeat		chromOut
chr16	18666485	T	G	999	11 11 11 11 11 11 11 11	25	0	0	21	9	0	0	20	11	0	0	19	6	0	0	20	9	0	0	18	10	0	0	22	5	0	0	27	7	0	0	23	3	merge_repeat		chromOut		nested
chr16	18783128	C	A	999	11 11 11 11 11 11 11 11	32	0	0	10	26	0	0	8	33	0	0	8	24	0	0	14	27	0	0	14	22	0	0	15	22	0	0	9	28	0	0	15	24	merge_repeat		chromOut
chr16	18783184	T	A	999	11 11 11 11 11 11 11 11	22	0	0	9	13	0	0	6	24	0	0	12	14	0	0	15	18	0	0	14	14	0	0	11	15	0	0	14	19	0	0	10	23	merge_repeat		chromOut
chr16	18846882	G	C	999	11 11 11 11 11 11 11 11	31	0	0	18	17	0	0	24	15	0	1	19	21	0	0	20	26	0	0	20	15	0	0	8	23	0	0	11	28	0	0	12	27	merge_repeat		chromOut		nested
chr16	18878926	C	A	999	11 11 11 11 11 11 11 11	36	0	0	20	16	0	1	29	22	0	0	18	19	0	0	17	22	0	0	27	29	0	0	23	16	0	0	21	15	0	0	26	18
chr16	18878986	C	A	999	11 11 11 11 11 11 11 11	31	0	0	26	5	0	0	36	10	0	0	32	16	0	0	29	16	0	0	41	11	0	0	30	7	0	0	31	9	0	0	39	14	merge_repeat		chromOut
chr16	18973710	A	T	999	11 11 11 11 11 11 11 11	38	0	0	31	17	0	0	24	20	0	0	37	24	0	0	24	17	0	0	36	22	0	0	22	16	0	0	35	20	0	0	23	23	merge_repeat		chromOut
chr16	18973712	A	T	999	11 11 11 11 11 11 11 11	38	0	0	32	17	0	0	25	19	0	0	37	24	0	0	23	17	0	0	35	22	0	0	22	16	0	0	34	20	0	0	24	23	merge_repeat		chromOut
chr16	18973725	C	T	999	11 11 11 11 11 11 11 11	42	0	0	34	17	0	0	27	22	0	0	37	24	0	0	29	15	0	0	38	22	0	0	22	20	0	0	42	21	0	0	27	24	merge_repeat		chromOut
chr16	18974128	C	A	999	11 11 11 11 11 11 11 11	52	0	0	28	24	0	0	28	29	0	0	30	31	0	0	24	29	0	0	27	25	0	0	26	31	0	0	22	35	0	0	36	26
chr16	18974152	G	A	999	11 11 11 11 11 11 11 11	47	0	0	26	21	0	0	24	27	0	0	25	28	0	0	23	31	0	0	27	22	0	0	24	30	0	0	27	31	0	1	35	24
chr16	18974215	A	T	999	11 11 11 11 11 11 11 11	30	0	0	20	10	0	0	18	12	0	0	18	18	0	0	28	26	0	0	32	15	0	0	24	24	0	0	26	17	0	0	32	21
chr16	18974222	C	G	999	11 11 11 11 11 11 11 11	29	0	0	20	10	0	0	18	11	0	0	19	15	0	0	29	27	0	0	29	8	0	0	24	20	0	0	25	17	0	0	31	19
chr16	18974225	C	A	999	11 11 11 11 11 11 11 11	30	0	0	20	13	0	0	19	11	0	0	19	16	0	0	29	26	0	0	31	11	0	0	25	22	0	0	25	17	0	0	31	20
chr16	19016678	T	A	999	11 11 11 11 11 11 11 11	59	0	0	44	30	0	0	38	25	0	0	30	29	1	0	39	42	0	0	34	30	0	0	31	31	0	0	33	34	0	0	37	33	merge_repeat		chromOut		nested
chr16	19016686	C	A	999	11 11 11 11 11 11 11 11	58	0	0	44	28	0	0	39	24	0	0	31	27	0	0	40	38	0	0	33	28	0	0	33	31	0	0	31	36	0	0	35	34	merge_repeat		chromOut		nested
chr16	19115168	T	A	999	11 11 11 11 11 11 11 11	53	0	0	30	34	0	0	41	33	0	0	35	38	0	0	20	33	0	0	39	25	0	0	29	30	0	0	34	29	0	0	18	36	merge_repeat		chromOut		nested
chr16	19130868	T	C	999	11 11 11 11 11 11 11 11	45	1	0	23	36	0	1	25	30	0	1	28	24	0	0	30	22	0	0	24	23	0	0	27	27	0	0	22	23	1	0	20	26	merge_repeat		chromOut		nested
chr16	19130869	G	A	999	11 11 11 11 11 11 11 11	45	1	0	23	36	0	1	25	30	0	0	28	24	0	0	30	22	1	0	23	23	0	0	27	27	0	0	22	23	1	0	20	26	merge_repeat		chromOut		nested
chr16	19130890	C	T	999	11 11 11 11 11 11 11 11	51	1	1	24	40	0	1	26	26	0	0	23	28	0	0	25	26	1	0	22	28	0	0	29	26	0	0	22	29	1	0	20	33	merge_repeat		chromOut		nested
chr16	19130896	T	C	999	11 11 11 11 11 11 11 11	50	2	0	24	40	0	2	25	28	0	0	23	28	0	1	24	25	1	0	22	28	0	0	26	28	0	0	23	30	1	1	21	35	merge_repeat		chromOut		nested
chr16	19130906	G	C	999	11 11 11 11 11 11 11 11	49	2	0	24	39	1	1	24	26	0	0	22	27	0	1	25	26	2	0	22	28	0	0	28	33	0	0	23	27	1	0	24	31	merge_repeat		chromOut		nested
chr16	19130915	G	A	999	11 11 11 11 11 11 11 11	45	2	0	23	33	0	1	25	25	0	1	21	24	0	0	26	24	2	0	21	27	0	0	24	30	0	0	22	23	1	0	22	32	merge_repeat		chromOut		nested
chr16	19130916	G	A	999	11 11 11 11 11 11 11 11	45	2	0	23	33	0	1	25	26	0	1	21	24	0	0	26	24	2	0	21	27	0	0	25	30	0	0	22	23	0	0	24	32	merge_repeat		chromOut		nested
chr16	19130934	A	T	999	11 11 11 11 11 11 11 11	49	2	1	23	31	0	2	26	26	0	0	22	27	0	0	22	27	1	0	20	30	1	0	23	28	1	1	26	25	2	0	21	35	merge_repeat		chromOut		nested
chr16	19130936	G	A	999	11 11 11 11 11 11 11 11	49	2	1	23	31	0	2	26	27	1	0	22	27	0	0	22	27	1	0	20	30	1	0	23	28	2	1	25	25	2	0	20	35	merge_repeat		chromOut		nested
chr16	19130945	C	T	999	11 11 11 11 11 11 11 11	53	1	0	25	34	0	0	27	27	1	0	23	30	0	0	23	30	0	0	22	34	2	0	24	31	1	0	30	27	3	0	24	37	merge_repeat		chromOut		nested
chr16	19130992	G	A	999	11 11 11 11 11 11 11 11	49	0	2	26	28	0	0	24	25	2	0	22	33	0	0	27	36	2	0	28	35	1	0	26	30	2	0	28	32	1	0	34	41	merge_repeat		chromOut		nested
chr16	20525299	C	A	999	11 11 11 11 11 11 11 11	39	0	0	15	26	0	0	23	19	0	0	21	18	0	0	22	20	0	0	24	20	0	0	14	27	0	1	23	17	0	0	21	22
chr16	20619970	G	C	999	11 11 11 11 11 11 11 11	29	0	0	15	24	0	0	15	20	0	0	21	21	0	0	23	33	0	0	26	31	0	0	12	17	0	0	24	20	0	0	16	20
chr16	20619976	G	C	999	11 11 11 11 11 11 11 11	29	0	0	14	24	0	0	14	23	0	0	22	23	0	0	22	34	0	0	27	32	0	0	11	18	0	0	23	20	0	0	17	22
chr16	20673158	A	G	999	11 11 11 11 11 11 11 11	29	1	0	15	13	0	0	27	12	0	0	18	15	0	0	22	23	0	0	18	12	0	0	29	21	0	0	25	21	0	0	21	18
chr16	21080434	C	G	999	11 11 11 11 11 11 11 11	38	0	0	22	20	0	0	14	25	0	0	17	21	0	0	26	28	0	0	29	29	0	0	25	17	0	0	24	23	0	0	23	20	merge_repeat			simple
chr16	21266518	C	A	999	11 11 11 11 11 11 11 11	46	0	0	24	27	0	0	36	34	0	0	21	26	0	0	32	35	0	0	21	33	0	0	24	31	0	0	24	22	0	0	25	25	merge_repeat		chromOut
chr16	21347525	C	T	999	11 11 11 11 11 11 11 11	44	0	0	17	27	0	0	22	24	0	0	23	22	0	0	36	28	0	0	24	29	0	0	30	30	0	0	15	36	0	0	27	17
chr16	22678294	T	C	999	11 11 11 11 11 11 11 11	52	0	0	34	30	0	0	41	27	0	0	23	29	0	0	28	32	0	0	41	21	0	0	38	30	0	0	34	24	0	0	35	18
chr16	22863606	T	C	999	11 11 11 11 11 11 11 11	40	0	0	29	21	1	0	36	22	0	0	33	16	0	0	39	19	0	0	32	19	0	0	36	21	0	0	27	26	0	1	19	20
chr16	23398695	A	G	999	11 11 11 11 11 11 11 11	48	0	0	22	26	0	0	35	33	0	0	27	32	0	0	23	39	0	0	24	30	0	0	32	22	0	0	35	22	0	0	26	26
chr16	24017529	G	C	999	11 11 11 11 11 11 11 11	24	0	0	18	17	0	0	14	24	0	0	12	14	0	0	15	15	0	0	26	18	0	0	13	17	0	0	14	18	0	0	12	12	merge_repeat	trfMask	chromOut	simple
chr16	24150291	T	C	999	11 11 11 11 11 11 11 11	46	0	0	18	35	0	0	32	14	0	0	21	26	0	0	33	25	0	0	34	35	0	0	24	29	0	0	23	25	0	0	27	27
chr16	24321637	T	A	999	11 11 11 11 11 11 11 11	40	0	0	23	36	0	0	23	26	0	0	23	26	0	0	26	27	0	0	31	32	0	0	16	24	0	0	30	29	0	0	22	32	merge_repeat		chromOut		nested
chr16	24321651	G	A	999	11 11 11 11 11 11 11 11	43	0	0	30	32	0	0	26	24	0	0	24	28	0	0	28	26	0	0	32	32	0	0	20	23	0	0	31	28	0	0	25	32	merge_repeat		chromOut		nested
chr16	24321655	C	A	999	11 11 11 11 11 11 11 11	45	0	0	31	31	0	0	31	22	0	0	22	27	0	0	28	26	0	0	35	34	0	0	21	24	0	0	30	29	0	0	24	36	merge_repeat		chromOut		nested
chr16	25805694	A	G	999	11 11 11 11 11 11 11 11	30	0	0	16	22	0	0	25	20	0	0	14	19	0	0	10	26	0	0	21	32	0	0	18	26	0	0	15	22	0	0	16	14
chr16	25805712	A	G	999	11 11 11 11 11 11 11 11	36	0	0	22	21	0	0	31	17	0	0	21	15	0	0	15	27	0	0	22	27	0	0	21	27	0	0	16	23	0	0	21	15
chr16	25858933	T	G	999	11 11 11 11 11 11 11 11	25	0	0	19	16	0	0	22	17	0	0	17	21	0	0	21	20	0	0	31	28	0	0	22	20	0	0	26	18	0	0	15	10	merge_repeat	trfMask		simple	nested
chr16	25858938	T	G	999	11 11 11 11 11 11 11 11	24	0	0	18	16	0	0	21	15	0	0	20	20	0	0	23	20	0	0	29	26	0	0	22	21	0	0	24	17	0	0	15	9	merge_repeat	trfMask		simple	nested
chr16	27453098	T	C	999	11 11 11 11 11 11 11 11	54	0	0	29	32	0	0	42	34	0	0	29	38	0	0	39	43	0	0	37	28	0	0	24	30	0	0	34	29	0	0	35	38
chr16	27625886	G	A	999	11 11 11 11 11 11 11 11	25	0	0	35	10	0	0	13	12	0	0	31	11	0	0	27	13	0	0	29	15	0	0	28	9	0	0	32	7	0	0	17	12	merge_repeat		chromOut
chr16	27692643	C	T	999	11 11 11 11 11 11 11 11	55	0	0	36	32	0	0	39	30	0	0	38	34	0	0	36	27	1	0	20	34	0	0	42	21	0	0	28	32	0	0	32	37	merge_repeat		chromOut		nested
chr16	28869756	A	G	999	11 11 11 11 11 11 11 11	45	0	0	30	26	0	0	26	22	0	0	27	20	0	0	25	21	0	0	24	22	0	0	19	26	0	0	26	21	0	0	24	28
chr16	28869863	A	G	999	11 11 11 11 11 11 11 11	30	0	0	16	15	0	0	11	19	0	0	10	33	0	0	10	23	0	0	15	18	0	0	12	25	0	0	12	21	0	0	9	23
chr16	29172065	G	C	999	11 11 11 11 11 11 11 11	58	0	0	33	42	0	0	37	31	0	0	40	28	0	0	33	28	0	0	23	35	0	0	33	27	0	0	37	39	0	0	46	27
chr16	32332440	G	C	999	11 11 11 11 11 11 11 11	33	0	0	26	17	0	0	14	27	0	0	14	24	0	0	21	20	0	0	14	31	0	0	19	23	0	0	24	22	0	0	17	16
chr16	32335140	C	A	999	11 11 11 11 11 11 11 11	46	0	0	26	23	0	0	29	22	0	0	29	23	0	0	29	24	0	0	43	24	0	0	26	22	0	0	27	19	0	0	31	20
chr16	32335147	C	A	999	11 11 11 11 11 11 11 11	46	0	0	28	23	0	0	34	21	0	0	29	19	0	0	30	25	0	0	42	23	0	0	25	21	0	0	31	18	0	0	30	17
chr16	32335208	C	A	999	11 11 11 11 11 11 11 11	40	0	0	33	21	0	0	37	14	0	0	32	23	0	0	25	27	0	0	31	26	0	0	32	21	0	0	31	18	0	0	27	13	merge_repeat		chromOut
chr16	32335223	C	A	999	11 11 11 11 11 11 11 11	43	0	0	31	22	0	1	40	14	0	1	32	26	0	0	22	28	0	0	32	26	0	0	33	25	0	0	30	21	0	0	27	16	merge_repeat		chromOut
chr16	32347976	G	C	999	11 11 11 11 11 11 11 11	34	0	0	16	33	0	0	13	21	0	0	22	24	0	0	23	23	0	0	32	34	0	0	14	30	0	0	31	24	0	0	12	26	merge_repeat		chromOut		nested
chr16	32374106	G	T	999	11 11 11 11 11 11 11 11	23	0	0	12	11	0	0	4	19	0	0	9	23	0	0	16	19	0	0	12	22	0	0	7	22	0	0	15	19	0	0	9	22	merge_repeat		chromOut
chr16	32413103	C	A	999	11 11 11 11 11 11 11 11	27	0	0	21	17	0	0	14	13	0	0	26	6	0	0	19	20	0	0	33	13	0	0	21	10	0	0	25	14	0	0	32	12	merge_repeat		chromOut		nested
chr16	32413104	C	A	999	11 11 11 11 11 11 11 11	27	0	0	21	17	0	0	14	13	0	0	26	5	0	0	19	21	0	0	33	13	0	0	21	10	0	0	25	14	0	0	32	12	merge_repeat		chromOut		nested
chr16	32413143	C	A	999	11 11 11 11 11 11 11 11	32	0	0	29	7	0	0	20	12	0	0	33	6	0	0	28	14	0	0	37	13	0	0	27	11	0	0	32	10	0	0	26	9	merge_repeat		chromOut		nested
chr16	32415398	T	C	999	11 11 11 11 11 11 11 11	42	0	0	16	26	0	0	13	37	0	0	13	33	0	0	21	21	0	0	22	33	0	0	17	29	0	0	20	30	0	0	18	26	merge_repeat		chromOut		nested
chr16	32415421	T	C	999	11 11 11 11 11 11 11 11	42	0	0	14	28	0	0	14	33	0	0	15	37	0	0	24	27	0	0	22	39	0	0	16	28	0	0	17	26	0	0	19	26	merge_repeat		chromOut		nested
chr16	32700576	T	C	999	11 11 11 11 11 11 11 11	41	0	0	28	29	0	0	28	37	0	0	18	23	0	0	26	22	0	0	29	32	0	0	23	33	0	0	21	32	0	0	31	20
chr16	32755676	C	G	999	11 11 11 11 11 11 11 11	35	0	0	16	19	0	0	21	15	0	0	18	28	0	0	40	40	0	1	20	27	0	0	21	26	0	0	20	15	0	0	20	28	merge_repeat			simple
chr16	32755677	T	A	999	11 11 11 11 11 11 11 11	35	0	0	15	20	0	0	21	15	0	0	17	28	0	1	40	39	0	1	20	26	0	0	22	26	0	0	20	15	0	0	20	28	merge_repeat			simple
chr16	32755684	T	A	999	11 11 11 11 11 11 11 11	32	0	0	19	18	0	0	23	18	0	0	17	30	0	0	40	40	0	0	21	28	0	0	22	27	0	0	19	13	0	0	20	29	merge_repeat			simple
chr16	32755690	C	A	999	11 11 11 11 11 11 11 11	33	0	0	17	18	0	0	22	18	0	0	16	30	0	0	38	38	0	0	24	28	0	0	23	27	0	0	20	13	0	0	22	28	merge_repeat			simple
chr16	32755699	T	A	999	11 11 11 11 11 11 11 11	32	0	0	18	14	0	0	24	16	0	0	17	24	0	0	36	29	0	0	20	28	0	0	24	29	0	0	21	14	0	0	21	22	merge_repeat			simple
chr16	32755703	C	G	999	11 11 11 11 11 11 11 11	32	0	0	18	14	0	0	24	16	0	0	16	23	0	0	36	29	0	1	20	28	1	0	22	30	0	0	21	14	0	0	21	22	merge_repeat			simple
chr16	32755705	G	A	999	11 11 11 11 11 11 11 11	35	0	0	20	15	0	0	24	16	0	0	17	25	0	0	37	29	0	0	20	30	0	0	24	30	0	0	22	14	0	0	21	23	merge_repeat			simple
chr16	32755717	G	C	999	11 11 11 11 11 11 11 11	41	0	0	21	20	0	0	25	22	0	0	23	25	0	0	38	28	0	0	26	31	0	0	26	28	0	0	23	20	0	0	26	26	merge_repeat			simple
chr16	34996380	A	T	999	11 11 11 11 11 11 11 11	31	0	0	20	21	0	0	24	19	0	0	19	20	0	0	19	26	0	0	29	24	0	0	23	19	0	0	19	26	0	0	17	14
chr16	35878812	C	A	999	11 11 11 11 11 11 11 11	20	0	0	26	16	0	0	14	11	0	0	19	12	0	0	24	12	0	0	18	5	0	0	12	8	0	0	12	12	0	0	16	14	merge_repeat		chromOut		nested
chr16	36244005	T	C	999	11 11 11 11 11 11 11 11	47	0	0	33	40	0	0	32	23	0	0	24	23	0	0	38	22	0	0	38	25	0	0	37	22	0	0	27	25	0	0	28	19	merge_repeat		chromOut
chr16	36688708	A	C	999	11 11 11 11 11 11 11 11	46	0	0	32	39	0	0	34	28	0	0	38	34	0	0	27	35	0	0	30	39	0	0	22	25	0	0	26	20	0	0	31	34	merge_repeat		chromOut		nested
chr16	36688713	C	T	999	11 11 11 11 11 11 11 11	47	0	0	32	40	0	0	35	29	0	0	40	34	0	0	29	35	0	0	34	39	0	0	22	26	0	0	26	21	0	0	31	32	merge_repeat		chromOut		nested
chr16	36772445	A	G	999	11 11 11 11 11 11 11 11	48	0	0	37	30	0	0	40	21	0	0	29	26	0	0	37	32	0	0	39	31	0	0	33	15	0	0	38	24	0	0	42	27
chr16	37681223	C	G	999	11 11 11 11 11 11 11 11	22	0	0	1	21	0	0	1	26	0	0	1	25	0	0	5	21	0	0	11	21	0	0	6	25	0	0	1	25	0	0	5	19	merge_repeat		chromOut		nested
chr16	38530777	T	C	999	11 11 11 11 11 11 11 11	22	0	0	10	14	0	0	17	27	0	0	5	17	0	0	17	18	0	0	19	22	0	0	22	19	0	0	7	29	0	0	9	23	merge_repeat		chromOut
chr16	39047760	C	T	999	11 11 11 11 11 11 11 11	26	0	0	8	22	0	0	12	24	0	0	12	20	0	0	5	22	0	1	16	19	0	0	6	20	0	0	11	21	0	0	11	21	merge_repeat		chromOut
chr16	39425912	G	A	999	11 11 11 11 11 11 11 11	40	0	2	30	27	0	0	19	33	1	0	25	25	0	0	30	32	0	0	25	22	0	0	23	17	0	0	28	29	1	0	29	32	merge_repeat		chromOut
chr16	42203608	T	A	999	11 11 11 11 11 11 11 11	57	0	0	39	38	0	0	35	27	0	0	33	35	0	0	36	26	0	0	48	33	0	0	43	19	0	0	46	30	0	0	32	25	merge_repeat		chromOut
chr16	44537497	C	A	999	11 11 11 11 11 11 11 11	47	0	0	23	27	0	1	32	36	2	0	26	30	0	0	33	29	1	0	20	26	0	0	19	43	1	0	23	29	0	0	28	28	merge_repeat	trfMask	chromOut	simple
chr16	44537599	A	G	999	11 11 11 11 11 11 11 11	44	0	0	15	29	0	2	32	29	0	0	20	28	0	0	22	34	0	1	19	31	0	0	31	33	0	0	22	30	0	0	25	30	merge_repeat	trfMask	chromOut	simple
chr16	44537623	A	C	999	11 11 11 11 11 11 11 11	39	0	0	15	24	0	1	32	26	0	0	24	28	0	1	26	31	0	1	21	28	0	0	32	25	0	0	25	22	0	0	30	25	merge_repeat	trfMask	chromOut	simple
chr16	44537626	C	T	999	11 11 11 11 11 11 11 11	39	0	0	16	23	0	1	31	26	0	0	23	27	0	1	25	30	0	1	19	29	0	1	33	23	0	0	26	22	0	0	30	25	merge_repeat	trfMask	chromOut	simple
chr16	44537634	G	T	999	11 11 11 11 11 11 11 11	43	0	0	18	25	0	0	36	26	0	0	23	29	0	0	26	31	0	0	24	32	0	0	35	25	0	0	30	21	0	0	33	26	merge_repeat	trfMask	chromOut	simple
chr16	44537658	G	T	999	11 11 11 11 11 11 11 11	38	0	0	19	19	0	0	40	21	0	0	25	22	0	0	17	25	0	0	29	23	0	0	24	23	0	0	28	17	0	0	27	23	merge_repeat	trfMask		simple
chr16	44537661	C	T	999	11 11 11 11 11 11 11 11	37	0	0	18	19	0	0	37	21	0	0	24	24	0	0	17	25	0	0	28	23	0	0	22	22	0	0	27	17	0	0	27	23	merge_repeat	trfMask		simple
chr16	44537712	G	T	999	11 11 11 11 11 11 11 11	26	0	0	14	17	0	0	25	14	0	0	23	15	0	0	11	25	0	0	12	16	0	0	21	18	0	0	22	9	0	0	9	17	merge_repeat	trfMask	chromOut	simple
chr16	44537713	T	C	999	11 11 11 11 11 11 11 11	35	0	0	22	17	0	0	35	17	0	0	28	17	0	0	19	27	0	0	22	20	0	0	28	19	0	0	32	10	0	0	18	17	merge_repeat	trfMask	chromOut	simple
chr16	46232323	C	T	999	11 11 11 11 11 11 11 11	20	0	0	13	10	0	0	16	7	0	0	11	17	0	0	13	11	0	0	15	17	0	0	12	8	0	0	13	12	0	0	16	17	merge_repeat	trfMask	chromOut	simple	nested
chr16	48426844	T	G	999	11 11 11 11 11 11 11 11	23	0	0	26	12	0	0	30	10	0	0	28	10	0	0	13	10	0	0	26	2	0	0	16	14	0	0	31	7	0	0	29	9	merge_repeat		chromOut
chr16	48426845	G	C	999	11 11 11 11 11 11 11 11	23	0	0	26	12	0	0	30	10	0	0	28	10	0	0	13	10	0	0	26	2	0	0	16	14	0	0	31	7	0	0	29	9	merge_repeat		chromOut
chr16	48426848	G	C	999	11 11 11 11 11 11 11 11	23	0	0	26	12	0	0	29	10	0	0	28	10	0	0	13	10	0	0	25	2	0	0	16	14	0	0	30	7	0	0	29	9	merge_repeat		chromOut
chr16	48426868	T	C	999	11 11 11 11 11 11 11 11	25	0	0	28	11	0	0	33	12	0	0	31	11	0	0	17	8	0	0	25	3	0	0	19	19	0	0	31	8	0	0	36	10	merge_repeat		chromOut
chr16	50369824	C	G	999	11 11 11 11 11 11 11 11	27	0	0	17	10	0	0	22	9	0	0	21	30	0	0	24	32	0	0	16	33	0	0	23	19	0	0	29	23	0	0	19	10
chr16	50499542	G	A	999	11 11 11 11 11 11 11 11	26	0	0	19	8	0	0	17	9	0	0	18	16	0	0	18	24	0	0	21	18	0	0	21	15	0	0	12	15	0	0	23	8	merge_repeat	trfMask	chromOut	simple
chr16	50499548	G	A	999	11 11 11 11 11 11 11 11	26	0	0	19	7	0	0	18	10	0	0	21	17	0	1	17	23	0	0	21	21	0	0	20	18	0	0	13	17	0	0	23	9	merge_repeat	trfMask	chromOut	simple
chr16	51113254	C	T	999	11 11 11 11 11 11 11 11	58	0	0	30	34	0	0	43	36	1	0	33	39	0	0	31	47	0	0	34	41	0	1	25	32	0	0	21	38	0	0	26	37	merge_repeat	trfMask	chromOut	simple
chr16	51113348	T	A	999	11 11 11 11 11 11 11 11	55	0	0	41	27	0	0	57	22	0	0	44	26	0	0	45	33	0	0	36	32	0	0	41	26	0	0	48	18	0	0	32	23	merge_repeat	trfMask		simple
chr16	51113365	G	A	999	11 11 11 11 11 11 11 11	53	1	0	43	24	0	0	52	23	0	0	48	21	0	0	47	31	0	0	39	30	0	0	44	24	0	0	44	20	0	0	35	18	merge_repeat	trfMask		simple
chr16	51113385	T	A	999	11 11 11 11 11 11 11 11	56	0	0	45	22	0	0	48	18	0	0	53	23	0	0	46	28	0	0	36	23	0	0	45	21	0	0	43	17	0	0	39	17	merge_repeat	trfMask	chromOut	simple
chr16	51171956	C	T	999	11 11 11 11 11 11 11 11	57	0	0	25	37	0	0	39	28	0	0	30	27	0	0	32	35	0	0	31	30	0	0	31	29	0	0	33	30	0	0	24	34
chr16	52203266	G	A	999	11 11 11 11 11 11 11 11	43	0	0	32	23	0	0	44	35	0	0	17	35	0	0	40	32	0	0	43	33	0	0	40	23	0	0	41	25	0	0	19	24	merge_repeat		chromOut
chr16	53712640	T	C	999	11 11 11 11 11 11 11 11	40	0	0	39	27	0	0	31	27	0	0	29	31	0	0	22	23	0	0	30	26	0	0	26	20	0	0	31	22	0	0	18	22	merge_repeat		chromOut		nested
chr16	53796903	G	T	999	11 11 11 11 11 11 11 11	48	0	0	29	45	0	0	35	31	0	0	22	31	0	0	26	22	0	0	34	33	0	0	34	21	0	0	37	39	0	0	28	41	merge_repeat		chromOut
chr16	53797161	T	C	999	11 11 11 11 11 11 11 11	49	0	0	34	27	0	0	26	27	0	0	30	19	0	0	37	29	0	0	41	27	0	1	29	30	0	0	29	35	0	0	37	27	merge_repeat		chromOut
chr16	53797231	T	C	999	11 11 11 11 11 11 11 11	50	0	0	32	32	0	0	31	36	0	0	30	20	0	0	40	38	0	0	39	30	0	0	28	35	0	0	22	37	0	0	28	32	merge_repeat		chromOut
chr16	54271072	A	T	999	11 11 11 11 11 11 11 11	55	0	0	33	25	0	0	34	41	0	0	29	32	0	0	23	36	0	0	35	33	0	0	23	40	0	0	22	33	0	0	34	37
chr16	55865709	A	G	999	11 11 11 11 11 11 11 11	43	0	0	30	13	0	0	28	19	0	0	29	18	0	0	38	21	0	0	25	24	0	0	32	18	0	0	25	23	0	0	36	14
chr16	55870661	T	C	999	11 11 11 11 11 11 11 11	22	0	0	29	4	0	0	29	2	0	0	30	5	0	0	42	3	0	0	38	6	0	0	31	3	0	0	30	7	0	0	20	2
chr16	55925900	A	T	999	11 11 11 11 11 11 11 11	44	0	0	28	32	0	0	31	19	0	0	18	26	0	0	18	34	0	0	21	29	0	0	24	30	0	0	24	34	0	0	23	32	merge_repeat		chromOut		nested
chr16	55925901	G	A	999	11 11 11 11 11 11 11 11	44	0	1	28	31	1	0	30	19	0	0	18	26	0	0	18	34	0	0	21	29	2	0	22	30	0	0	24	34	0	0	23	32	merge_repeat		chromOut		nested
chr16	56052108	C	T	999	11 11 11 11 11 11 11 11	27	0	0	23	21	0	1	11	23	0	0	3	24	0	0	10	30	0	1	11	20	0	0	8	19	0	0	19	19	0	0	9	21	merge_repeat		chromOut		nested
chr16	57944868	T	C	999	11 11 11 11 11 11 11 11	29	1	0	16	23	0	0	15	14	0	0	17	23	0	0	15	21	0	0	21	26	1	0	17	24	0	1	30	23	0	0	15	25	merge_repeat	trfMask	chromOut	simple	nested
chr16	58940312	G	T	999	11 11 11 11 11 11 11 11	31	0	0	21	15	0	0	22	17	1	0	19	18	0	0	16	15	0	1	13	17	0	1	18	14	0	0	18	28	0	0	29	17	merge_repeat		chromOut		nested
chr16	58940324	C	A	999	11 11 11 11 11 11 11 11	28	0	0	21	20	0	0	22	20	1	0	19	21	0	0	12	16	0	0	16	20	0	1	15	16	0	0	16	31	0	0	26	19	merge_repeat		chromOut		nested
chr16	58940349	G	T	999	11 11 11 11 11 11 11 11	34	0	0	21	24	0	0	22	21	0	0	19	24	0	0	15	19	0	0	18	25	0	0	17	19	0	0	18	31	0	0	28	25	merge_repeat		chromOut		nested
chr16	58940351	A	G	999	11 11 11 11 11 11 11 11	35	0	0	21	24	0	0	22	21	0	0	19	24	0	0	16	19	0	0	18	25	0	0	17	19	0	0	18	31	0	0	28	25	merge_repeat		chromOut		nested
chr16	58940361	A	G	999	11 11 11 11 11 11 11 11	34	1	0	19	23	0	0	21	23	0	0	15	24	0	0	18	16	0	0	16	26	0	1	17	19	0	0	17	31	0	0	28	25	merge_repeat		chromOut		nested
chr16	58940477	G	C	999	11 11 11 11 11 11 11 11	46	0	0	28	31	0	0	34	28	0	0	19	33	0	1	30	29	0	1	22	26	1	0	18	27	0	1	30	39	1	0	20	25	merge_repeat		chromOut		nested
chr16	58940498	C	T	999	11 11 11 11 11 11 11 11	43	0	0	32	33	0	0	37	28	1	0	22	35	0	1	27	29	0	1	20	26	1	0	22	28	0	1	29	36	0	0	18	25	merge_repeat		chromOut		nested
chr16	59490505	G	T	999	11 11 11 11 11 11 11 11	30	0	0	16	17	0	0	17	15	0	0	12	20	0	0	14	22	0	0	20	20	0	0	14	20	0	0	15	15	0	0	20	14
chr16	60266441	A	G	999	11 11 11 11 11 11 11 11	53	0	0	26	28	0	0	31	30	0	0	22	31	0	0	31	26	0	0	37	27	0	0	25	31	0	0	31	25	0	0	25	31	merge_repeat		chromOut
chr16	60367699	C	A	999	11 11 11 11 11 11 11 11	26	0	0	21	5	0	0	21	15	0	0	30	5	0	0	23	14	0	0	28	12	0	0	23	13	0	0	24	15	0	0	18	9
chr16	60590775	T	C	999	11 11 11 11 11 11 11 11	28	0	0	17	12	0	0	18	16	0	0	25	9	0	1	30	14	0	0	21	17	0	0	24	9	0	0	19	9	0	0	25	8	merge_repeat		chromOut
chr16	60884476	G	C	999	11 11 11 11 11 11 11 11	35	0	0	24	16	0	0	22	16	0	0	22	21	0	0	22	20	0	0	26	18	0	0	23	16	0	0	24	16	0	0	17	18	merge_repeat				nested
chr16	60884477	A	C	999	11 11 11 11 11 11 11 11	35	0	0	24	16	0	0	21	16	0	0	22	21	0	0	22	20	0	0	27	18	0	0	23	16	0	0	24	16	0	0	17	18	merge_repeat				nested
chr16	60884489	T	A	999	11 11 11 11 11 11 11 11	34	0	0	23	12	0	0	21	13	0	0	26	18	0	0	29	17	0	0	35	15	0	0	25	13	0	0	25	17	0	0	20	15	merge_repeat				nested
chr16	60884492	G	A	999	11 11 11 11 11 11 11 11	34	1	0	23	13	0	0	22	13	0	0	26	19	0	0	29	18	0	0	34	16	0	0	24	14	0	0	25	17	0	0	19	15	merge_repeat				nested
chr16	62400235	A	T	999	11 11 11 11 11 11 11 11	26	0	0	26	10	0	0	26	13	0	0	17	9	0	0	34	22	0	0	25	10	0	0	19	7	0	0	16	13	0	0	16	18	merge_repeat		chromOut		nested
chr16	62472651	T	C	999	11 11 11 11 11 11 11 11	26	0	0	10	16	0	0	22	17	0	0	16	12	0	0	18	18	0	0	21	19	1	0	23	19	0	0	15	17	0	0	23	13	merge_repeat	trfMask	chromOut	simple
chr16	64555581	G	T	999	11 11 11 11 11 11 11 11	38	0	0	29	9	0	0	40	8	0	0	33	6	0	0	29	20	0	0	30	20	0	0	31	10	0	0	37	14	0	0	37	12	merge_repeat		chromOut		nested
chr16	64902231	T	C	999	11 11 11 11 11 11 11 11	38	0	0	23	18	0	0	25	15	0	0	27	16	0	0	37	19	0	0	35	16	0	0	26	12	0	0	24	15	0	0	33	6
chr16	64904313	A	G	999	11 11 11 11 11 11 11 11	38	0	0	29	33	0	0	15	32	0	0	22	33	0	0	26	27	0	0	30	29	0	0	28	25	0	0	24	17	0	0	20	18
chr16	65086822	T	C	999	11 11 11 11 11 11 11 11	42	0	0	30	39	0	0	31	27	0	0	26	28	0	0	25	40	0	0	18	24	0	0	29	21	0	0	40	26	0	0	25	24	merge_repeat		chromOut
chr16	65099936	A	G	999	11 11 11 11 11 11 11 11	47	0	0	35	20	0	0	27	34	0	0	32	37	0	0	39	49	0	0	44	33	0	0	26	28	0	0	20	27	0	0	25	31	merge_repeat		chromOut
chr16	65309464	G	T	999	11 11 11 11 11 11 11 11	57	0	0	36	35	0	0	33	32	0	0	34	38	0	0	29	39	0	0	28	34	0	0	27	30	0	0	36	39	0	0	39	28
chr16	66640921	T	G	999	11 11 11 11 11 11 11 11	43	0	0	20	34	0	0	16	33	0	0	19	45	0	0	27	31	0	0	24	28	0	0	26	40	0	0	28	21	0	0	19	24	merge_repeat		chromOut
chr16	66771814	G	T	999	11 11 11 11 11 11 11 11	34	0	0	20	23	0	1	18	23	0	0	20	24	0	0	28	28	0	0	24	34	0	0	17	17	0	0	27	22	0	0	29	28
chr16	66865123	C	A	999	11 11 11 11 11 11 11 11	39	0	0	20	32	0	0	20	28	0	0	17	31	0	0	23	41	0	0	33	36	0	0	36	30	0	0	20	34	0	0	24	15	merge_repeat		chromOut		nested
chr16	68665390	A	C	999	11 11 11 11 11 11 11 11	51	0	0	33	33	0	0	33	32	0	0	33	35	0	0	42	28	0	0	31	24	0	0	27	31	0	0	32	28	0	0	21	30
chr16	68665475	A	C	999	11 11 11 11 11 11 11 11	49	0	0	29	22	0	0	23	35	0	0	32	26	0	0	37	25	0	0	30	23	0	0	27	22	0	0	24	37	0	0	37	35
chr16	68665479	T	C	999	11 11 11 11 11 11 11 11	46	0	0	29	21	0	0	21	32	0	0	31	26	0	0	37	25	0	0	28	22	0	0	25	21	0	0	22	36	0	0	36	33
chr16	68665480	A	C	999	11 11 11 11 11 11 11 11	46	0	0	29	21	0	0	20	33	0	0	31	26	0	0	37	25	0	0	28	22	0	0	25	21	0	0	22	36	0	0	35	34
chr16	68665481	T	C	999	11 11 11 11 11 11 11 11	46	0	0	29	21	0	0	20	33	0	0	31	26	0	0	37	25	0	0	28	22	0	0	25	21	0	0	22	36	0	0	36	34
chr16	69232821	C	T	999	11 11 11 11 11 11 11 11	39	1	0	12	26	0	0	15	34	0	0	15	32	0	0	16	26	0	0	21	29	0	0	15	27	1	0	16	29	1	0	15	27	merge_repeat	trfMask	chromOut	simple
chr16	70100025	C	T	999	11 11 11 11 11 11 11 11	59	0	0	26	40	0	0	34	43	0	0	35	46	0	0	30	43	0	0	33	45	0	0	34	31	0	0	26	43	0	0	28	31
chr16	70114036	A	G	999	11 11 11 11 11 11 11 11	40	0	0	14	34	0	0	18	33	1	0	21	25	0	0	27	36	1	0	26	28	0	0	23	39	0	0	17	23	1	0	22	32
chr16	72026821	G	T	999	11 11 11 11 11 11 11 11	51	0	0	44	27	0	0	33	36	0	0	40	23	0	0	45	30	0	0	31	34	0	0	22	29	0	0	36	30	0	0	41	27
chr16	72030044	C	G	999	11 11 11 11 11 11 11 11	24	0	0	19	15	0	0	14	10	0	0	14	12	0	0	23	18	0	0	14	20	0	0	19	14	0	0	14	17	0	0	14	18
chr16	72030049	A	T	999	11 11 11 11 11 11 11 11	23	0	0	21	16	0	0	13	10	0	0	14	11	0	0	23	18	0	0	15	19	0	0	18	14	0	0	16	17	0	0	15	19
chr16	72030085	C	G	999	11 11 11 11 11 11 11 11	31	0	0	19	14	0	0	18	13	0	0	17	17	0	0	26	20	0	0	17	17	0	0	21	13	0	0	17	19	0	0	16	16
chr16	72056115	A	C	999	11 11 11 11 11 11 11 11	45	0	0	25	36	0	0	28	27	0	0	27	28	0	0	23	31	0	0	21	24	0	0	23	28	0	0	27	37	0	0	22	24
chr16	72881954	T	G	999	11 11 11 11 11 11 11 11	51	0	0	21	32	1	0	34	25	0	0	23	34	0	0	33	39	0	0	22	29	0	0	21	31	0	0	32	33	0	1	18	39	merge_repeat	trfMask	chromOut	simple
chr16	73535997	T	A	999	11 11 11 11 11 11 11 11	46	0	0	26	30	0	0	19	27	0	0	40	28	0	0	25	25	0	0	24	29	0	0	25	31	0	0	27	36	0	0	25	36	merge_repeat		chromOut
chr16	76384666	T	C	999	11 11 11 11 11 11 11 11	24	0	0	13	17	0	0	13	24	0	0	18	14	0	0	20	18	0	0	15	19	0	0	14	20	0	1	10	20	0	0	4	20
chr16	76684896	A	G	999	11 11 11 11 11 11 11 11	39	0	0	31	33	0	0	26	41	0	0	28	36	0	0	35	29	0	0	32	31	0	0	26	33	0	0	27	38	0	0	20	19
chr16	77510253	G	T	999	11 11 11 11 11 11 11 11	49	0	0	22	27	0	0	43	33	0	0	29	35	0	0	24	38	0	0	27	30	0	0	34	30	0	0	26	27	0	0	27	27	merge_repeat		chromOut
chr16	78252068	A	G	999	11 11 11 11 11 11 11 11	43	0	0	19	27	0	0	24	36	0	0	25	34	0	0	17	26	0	0	25	34	0	0	28	36	0	0	16	39	0	0	20	36
chr16	78252369	A	G	999	11 11 11 11 11 11 11 11	36	0	0	37	16	0	0	34	22	0	0	35	18	0	0	31	13	0	0	44	13	0	0	46	27	0	0	38	18	0	0	18	18
chr16	78846718	A	C	999	11 11 11 11 11 11 11 11	30	0	0	18	12	0	0	30	20	0	0	40	17	0	0	27	18	0	0	24	21	0	0	25	7	0	0	29	13	0	0	26	9	merge_repeat		chromOut		nested
chr16	80056202	G	A	999	11 11 11 11 11 11 11 11	20	0	0	14	17	0	0	11	9	0	0	17	21	0	0	21	24	0	0	26	14	0	0	13	13	0	0	17	10	0	0	22	11	merge_repeat	trfMask	chromOut	simple		segmentDup
chr16	80613585	C	A	999	11 11 11 11 11 11 11 11	24	0	0	28	17	0	0	22	20	0	0	19	7	0	0	26	25	0	0	11	13	0	0	19	14	0	0	18	17	0	0	22	18	merge_repeat	trfMask	chromOut	simple
chr16	82490587	T	C	999	11 11 11 11 11 11 11 11	48	0	0	42	21	0	0	35	38	0	0	46	31	0	0	43	24	0	0	28	20	0	0	38	25	0	0	28	25	0	0	41	23	merge_repeat		chromOut
chr16	83781488	T	C	999	11 11 11 11 11 11 11 11	40	0	0	27	13	0	0	24	23	0	0	33	27	0	0	26	30	0	0	20	23	0	0	26	30	0	0	29	25	0	0	26	27
chr16	84576981	A	G	999	11 11 11 11 11 11 11 11	30	1	0	17	12	0	0	19	25	0	0	19	17	0	0	21	22	0	0	23	28	0	0	16	21	0	0	17	17	0	0	16	24	merge_repeat		chromOut	simple	nested
chr16	85178913	A	T	999	11 11 11 11 11 11 11 11	38	0	0	20	29	0	0	36	33	0	0	22	16	0	0	35	27	0	0	40	33	0	0	24	28	0	0	29	30	0	0	26	28	merge_repeat		chromOut
chr16	85884702	T	C	999	11 11 11 11 11 11 11 11	21	0	0	15	12	0	0	12	12	0	0	14	11	0	0	13	11	0	1	17	14	0	0	10	16	0	0	13	13	0	0	11	10	merge_repeat		chromOut	simple
chr16	87562412	G	T	999	11 11 11 11 11 11 11 11	46	0	0	18	29	0	0	26	34	0	0	23	29	0	0	22	28	0	0	23	24	0	0	29	30	0	0	15	33	0	0	16	30	merge_repeat	trfMask	chromOut	simple
chr16	89868005	T	C	999	11 11 11 11 11 11 11 11	33	0	0	29	10	0	0	18	15	0	0	30	17	0	0	27	18	0	0	30	24	0	0	28	14	0	0	30	10	0	0	17	18
chr16	90892751	T	A	999	11 11 11 11 11 11 11 11	22	0	0	17	11	0	1	23	5	0	1	25	12	0	0	21	4	0	0	26	6	0	0	12	10	0	1	18	14	0	1	22	7	merge_repeat	trfMask	chromOut	simple	nested
chr16	93014741	A	C	999	11 11 11 11 11 11 11 11	42	0	0	21	33	0	0	23	34	0	0	16	34	0	0	31	28	0	0	26	33	0	0	27	19	0	0	21	23	0	0	17	25
chr16	93044993	G	A	999	11 11 11 11 11 11 11 11	52	0	0	17	35	0	0	17	36	0	0	24	31	0	0	34	39	0	0	20	40	0	0	28	27	0	0	28	38	0	0	20	32
chr16	93411024	A	T	999	11 11 11 11 11 11 11 11	52	0	0	30	25	0	0	33	27	1	0	35	27	0	0	33	32	0	0	34	28	0	0	28	24	0	0	35	30	0	0	30	23	merge_repeat		chromOut
chr16	93482223	C	T	999	11 11 11 11 11 11 11 11	45	0	0	30	25	1	2	25	36	1	0	29	23	0	0	26	23	0	0	33	25	0	0	21	29	0	0	23	22	0	1	25	25	merge_repeat		chromOut
chr16	94926772	A	G	999	11 11 11 11 11 11 11 11	29	0	0	8	31	0	0	12	17	0	0	17	23	0	0	22	19	0	0	15	29	0	0	18	15	0	0	11	22	0	0	14	19	merge_repeat	trfMask	chromOut	simple	nested
chr16	95004833	A	G	999	11 11 11 11 11 11 11 11	47	0	0	41	23	0	0	23	35	0	0	24	25	0	0	24	32	0	0	27	28	0	0	21	27	0	0	28	19	0	0	26	36
chr16	95044280	A	G	999	11 11 11 11 11 11 11 11	53	0	0	32	40	0	0	22	31	0	0	38	39	0	0	33	36	0	0	35	29	0	0	29	34	0	0	30	24	0	0	30	40
chr16	95044388	A	G	999	11 11 11 11 11 11 11 11	45	0	0	16	40	0	0	24	28	0	0	28	32	0	0	22	29	0	0	30	34	0	0	26	30	0	0	22	33	0	0	21	24
chr16	95069258	T	C	999	11 11 11 11 11 11 11 11	45	0	0	27	26	0	0	29	21	0	0	27	30	0	0	24	29	0	0	23	30	0	0	29	29	0	0	20	25	0	0	33	33
chr16	95079037	A	G	999	11 11 11 11 11 11 11 11	43	0	0	31	18	0	0	24	19	0	0	27	20	0	0	28	31	0	0	31	27	0	0	29	17	0	0	31	18	0	0	26	17	merge_repeat		chromOut		nested
chr16	95470979	A	C	999	11 11 11 11 11 11 11 11	23	0	0	20	10	0	0	17	6	0	0	24	9	0	0	25	11	0	0	26	19	0	0	23	6	0	1	20	13	0	0	20	16	merge_repeat	trfMask	chromOut	simple
chr16	95470991	A	C	999	11 11 11 11 11 11 11 11	24	0	0	18	10	0	0	18	6	0	0	21	4	0	0	25	12	0	0	24	18	1	0	20	8	0	0	21	9	0	0	17	14	merge_repeat	trfMask	chromOut	simple
chr16	95707454	C	T	999	11 11 11 11 11 11 11 11	49	0	0	25	24	0	0	23	26	0	0	33	37	0	0	36	25	0	0	24	30	0	0	25	25	0	0	26	23	0	0	33	30	merge_repeat	trfMask	chromOut	simple
chr16	95707513	G	T	999	11 11 11 11 11 11 11 11	23	0	0	8	19	0	0	7	21	0	0	11	32	0	0	4	20	0	0	5	25	0	0	2	22	0	0	4	21	0	0	5	18	merge_repeat	trfMask	chromOut	simple
chr16	95707628	G	A	999	11 11 11 11 11 11 11 11	29	0	0	6	27	0	0	12	19	0	0	14	19	0	0	25	20	0	0	24	12	0	0	17	14	0	0	13	16	0	0	17	25	merge_repeat	trfMask	chromOut	simple	nested
chr16	95982610	A	C	999	11 11 11 11 11 11 11 11	34	0	0	22	28	0	0	19	34	0	0	13	33	0	0	24	31	0	0	13	29	0	0	12	27	0	0	23	27	0	0	14	20	merge_repeat		chromOut
chr16	96190209	A	G	999	11 11 11 11 11 11 11 11	52	0	0	24	28	0	0	26	38	0	0	29	43	0	0	28	44	0	0	28	27	0	0	31	33	0	0	37	39	0	0	23	32
chr16	97343296	A	G	999	11 11 11 11 11 11 11 11	47	0	0	28	36	0	0	29	21	0	0	35	31	0	0	29	24	0	0	25	31	0	0	26	21	0	0	28	29	0	0	27	29
chr16	98011674	A	G	999	11 11 11 11 11 11 11 11	33	0	0	40	17	0	0	29	16	0	1	35	18	0	0	41	25	0	0	32	26	0	0	37	21	0	0	31	12	0	0	22	11	merge_repeat		chromOut	simple		segmentDup