chr	position	ref	alt	quality	samtools_GT_RAW	min_depth	1RF	1RR	1AF	1AR	2RF	2RR	2AF	2AR	3RF	3RR	3AF	3AR	4RF	4RR	4AF	4AR	5RF	5RR	5AF	5AR	6RF	6RR	6AF	6AR	7RF	7RR	7AF	7AR	8RF	8RR	8AF	8AR	merge_repeat	trfMask	chromOut	simple	nested	segmentDup
chr11	3832258	G	A	999	11 11 11 11 11 11 11 11	38	1	1	23	13	1	1	33	18	0	1	35	23	0	0	31	26	1	0	40	22	0	0	31	23	0	1	35	14	1	1	26	17	merge_repeat	trfMask	chromOut	simple
chr11	4695962	C	A	999	11 11 11 11 11 11 11 11	21	0	0	12	19	0	0	10	11	0	0	10	15	0	0	10	18	0	0	11	31	0	0	11	16	0	0	11	13	0	0	8	17	merge_repeat		chromOut		nested
chr11	7063524	G	C	999	11 11 11 11 11 11 11 11	23	0	0	7	16	0	0	12	15	0	0	13	23	0	0	19	34	0	0	12	14	0	0	7	26	0	0	14	15	0	0	13	14	merge_repeat		chromOut	simple
chr11	7486858	C	A	999	11 11 11 11 11 11 11 11	34	0	0	31	24	0	0	23	24	0	0	26	31	0	0	28	29	0	0	29	35	0	0	24	33	0	0	20	21	0	0	16	18	merge_repeat				nested
chr11	7556142	A	C	999	11 11 11 11 11 11 11 11	40	0	0	21	19	0	0	24	37	0	0	22	19	0	0	32	34	0	0	33	26	0	0	34	24	0	0	33	22	0	0	22	24	merge_repeat	trfMask	chromOut	simple
chr11	8711094	T	C	999	11 11 11 11 11 11 11 11	26	0	0	9	25	0	0	16	10	0	0	8	21	0	1	9	29	0	0	16	28	0	0	15	27	0	0	7	28	0	1	11	19
chr11	9726978	T	C	999	11 11 11 11 11 11 11 11	53	0	0	24	36	0	0	35	34	0	0	24	29	0	0	26	36	0	0	23	31	0	0	29	33	0	0	26	37	0	0	35	38
chr11	9834995	G	T	999	11 11 11 11 11 11 11 11	48	0	0	40	21	0	0	26	31	0	0	38	43	0	0	32	45	0	0	24	24	0	0	33	35	0	0	31	44	0	0	36	44	merge_repeat		chromOut
chr11	10829447	T	G	999	11 11 11 11 11 11 11 11	38	0	0	32	18	0	0	28	22	0	0	36	29	0	0	26	17	0	0	26	18	0	0	19	27	0	0	28	27	0	0	16	22	merge_repeat		chromOut
chr11	10969093	C	T	999	11 11 11 11 11 11 11 11	63	0	0	31	32	0	0	38	34	0	0	43	40	0	0	56	36	0	0	46	40	0	0	49	27	0	0	40	48	0	0	50	51	merge_repeat		chromOut		nested
chr11	13034350	A	G	999	11 11 11 11 11 11 11 11	38	0	0	23	23	0	0	21	32	0	0	24	30	0	0	23	25	0	0	30	27	0	0	22	32	0	0	19	19	0	0	22	28	merge_repeat		chromOut
chr11	13044505	A	G	999	11 11 11 11 11 11 11 11	46	0	0	27	40	0	0	26	26	0	0	22	45	0	0	26	30	0	0	18	37	0	0	20	29	0	0	28	33	0	0	20	26	merge_repeat		chromOut
chr11	13513096	T	C	999	11 11 11 11 11 11 11 11	51	0	0	28	27	0	0	37	36	0	0	20	31	0	0	23	35	0	0	40	32	0	0	24	28	0	0	28	40	0	0	29	33	merge_repeat		chromOut		nested
chr11	14030176	T	C	999	11 11 11 11 11 11 11 11	39	0	0	20	31	0	0	30	37	0	0	11	36	0	0	29	32	0	0	26	21	0	0	19	20	0	0	19	25	0	0	19	30	merge_repeat		chromOut	simple
chr11	16728343	T	C	999	11 11 11 11 11 11 11 11	37	0	0	31	25	0	0	17	20	0	0	27	18	0	0	37	30	0	0	27	17	0	0	34	19	0	0	27	35	0	0	20	19	merge_repeat		chromOut		nested
chr11	17377909	C	T	999	11 11 11 11 11 11 11 11	56	0	0	39	35	0	0	34	31	0	0	22	34	0	0	37	34	0	0	31	28	0	0	30	29	0	0	33	39	0	0	21	35	merge_repeat		chromOut
chr11	19283395	T	C	999	11 11 11 11 11 11 11 11	53	0	0	26	46	0	0	32	21	0	0	28	36	0	0	17	43	0	0	29	24	0	0	26	29	0	0	22	37	0	0	20	36
chr11	19732924	G	C	999	11 11 11 11 11 11 11 11	37	0	0	23	31	0	0	21	16	0	0	19	23	0	0	30	23	0	0	34	22	0	0	21	26	0	0	23	31	0	0	26	24	merge_repeat		chromOut
chr11	20112734	A	C	999	11 11 11 11 11 11 11 11	32	0	0	17	17	0	0	18	14	0	0	20	20	0	0	19	21	0	0	18	17	0	0	22	17	0	0	13	22	0	0	19	16
chr11	26010068	T	C	999	11 11 11 11 11 11 11 11	52	0	0	37	15	0	0	39	21	0	0	24	28	0	0	34	30	0	0	46	24	0	0	37	15	0	0	31	26	0	0	36	17
chr11	29032065	A	G	999	11 11 11 11 11 11 11 11	22	0	0	10	12	0	0	15	21	0	0	9	19	0	0	15	20	0	0	10	19	0	0	5	17	0	0	16	18	0	0	12	26	merge_repeat		chromOut
chr11	29103036	A	C	999	11 11 11 11 11 11 11 11	58	0	0	34	27	0	0	35	28	1	0	30	34	0	0	33	28	1	0	45	31	0	0	41	22	0	0	27	33	0	1	35	22	merge_repeat		chromOut
chr11	29779482	T	A	999	11 11 11 11 11 11 11 11	36	0	0	25	15	0	0	25	19	0	0	20	22	0	0	29	24	0	0	22	23	0	0	23	14	0	0	28	19	0	0	18	18
chr11	30155673	T	A	999	11 11 11 11 11 11 11 11	32	0	0	12	30	0	0	16	16	0	0	13	32	0	0	19	31	0	0	28	27	0	0	17	38	0	0	11	38	0	0	13	38
chr11	32419352	A	G	999	11 11 11 11 11 11 11 11	37	0	0	12	26	1	0	22	29	1	0	22	14	1	0	22	24	0	1	24	26	0	0	29	27	0	0	28	26	1	0	16	29	merge_repeat	trfMask	chromOut	simple
chr11	33354090	T	G	999	11 11 11 11 11 11 11 11	29	0	0	21	14	0	0	26	13	0	0	20	9	0	0	32	19	0	0	29	13	0	0	23	12	0	0	30	5	0	0	27	11	merge_repeat	trfMask	chromOut	simple
chr11	33548367	A	G	999	11 11 11 11 11 11 11 11	51	0	0	31	33	0	0	31	20	0	0	39	29	0	0	45	23	0	0	42	23	0	0	55	27	0	0	31	22	0	0	39	21
chr11	34542982	C	A	999	11 11 11 11 11 11 11 11	25	0	0	23	9	0	0	15	10	0	0	20	19	0	0	29	16	0	0	23	9	0	0	16	13	0	0	29	11	0	0	20	15	merge_repeat		chromOut	simple	nested
chr11	34543000	C	T	999	11 11 11 11 11 11 11 11	20	0	0	19	7	0	0	12	8	0	0	15	14	0	0	20	13	0	0	18	7	0	0	12	15	0	0	27	11	0	0	19	12	merge_repeat		chromOut	simple	nested
chr11	34543006	C	A	999	11 11 11 11 11 11 11 11	23	0	0	19	6	0	0	15	8	0	0	15	13	0	0	21	13	0	0	19	7	0	0	11	15	0	0	26	11	0	0	17	12	merge_repeat		chromOut	simple	nested
chr11	34543020	C	A	999	11 11 11 11 11 11 11 11	22	0	0	17	7	0	0	14	8	0	0	14	14	0	0	21	15	0	0	18	8	0	0	11	15	0	0	25	10	0	0	17	15	merge_repeat		chromOut	simple	nested
chr11	34543030	C	A	999	11 11 11 11 11 11 11 11	25	0	0	18	7	0	0	15	11	0	0	14	16	0	0	18	15	0	0	18	9	0	0	14	17	0	0	23	12	0	0	21	15	merge_repeat		chromOut	simple	nested
chr11	34543081	C	G	999	11 11 11 11 11 11 11 11	38	0	0	25	32	0	0	21	24	0	0	18	24	0	0	13	33	0	0	25	18	0	0	17	30	0	0	22	23	0	0	20	18	merge_repeat			simple
chr11	34543092	C	A	999	11 11 11 11 11 11 11 11	39	0	0	25	33	0	0	23	28	0	0	19	30	0	0	16	32	0	0	27	19	0	0	19	32	0	0	22	24	0	0	20	19	merge_repeat			simple
chr11	34543104	C	G	999	11 11 11 11 11 11 11 11	45	0	0	25	41	0	0	24	34	0	0	19	36	0	0	19	40	0	0	30	21	0	0	24	34	0	0	25	29	0	0	22	23	merge_repeat			simple
chr11	34543125	C	A	999	11 11 11 11 11 11 11 11	49	0	0	26	45	0	0	26	36	0	0	20	36	0	0	26	42	0	0	34	27	0	0	27	38	0	0	29	37	0	0	18	31	merge_repeat		chromOut	simple
chr11	34543235	C	A	999	11 11 11 11 11 11 11 11	47	0	0	30	36	0	0	25	26	0	0	22	26	0	0	32	34	0	0	28	31	0	0	28	19	0	0	38	38	0	0	25	35	merge_repeat		chromOut	simple
chr11	34543245	C	A	999	11 11 11 11 11 11 11 11	42	0	0	31	33	0	0	23	19	0	0	26	20	0	0	30	33	0	0	28	29	0	0	27	16	0	0	36	35	0	0	28	33	merge_repeat		chromOut	simple
chr11	34543270	C	A	999	11 11 11 11 11 11 11 11	40	0	0	34	27	0	0	25	21	0	0	31	18	0	0	28	30	0	0	25	24	0	0	26	14	0	0	33	33	0	0	32	26	merge_repeat		chromOut	simple
chr11	34543294	C	A	999	11 11 11 11 11 11 11 11	42	0	0	36	22	0	0	30	19	0	0	30	13	0	0	30	20	0	0	24	18	0	0	31	14	0	0	35	27	0	0	33	22	merge_repeat		chromOut	simple
chr11	34543322	C	G	999	11 11 11 11 11 11 11 11	46	0	0	32	19	0	0	36	19	0	0	31	19	0	0	29	19	0	0	29	20	0	0	36	18	0	0	38	21	0	0	30	16	merge_repeat			simple
chr11	34543342	C	A	999	11 11 11 11 11 11 11 11	49	0	0	36	16	0	0	35	19	0	0	30	19	0	0	32	17	0	0	28	24	0	0	33	18	0	0	39	17	0	0	30	19	merge_repeat		chromOut	simple
chr11	34543345	C	G	999	11 11 11 11 11 11 11 11	49	0	0	36	16	0	0	35	19	0	0	30	20	0	0	32	18	0	0	28	24	0	0	33	18	0	0	39	19	0	0	30	19	merge_repeat		chromOut	simple
chr11	34543908	A	T	999	11 11 11 11 11 11 11 11	44	0	0	19	25	0	0	30	24	0	0	25	23	0	0	18	27	0	0	29	20	0	0	22	26	0	0	26	25	0	0	26	20	merge_repeat		chromOut	simple
chr11	34543909	A	G	999	11 11 11 11 11 11 11 11	44	0	0	19	25	0	0	30	24	0	0	25	23	0	0	18	27	0	0	29	20	0	0	22	26	0	0	26	25	0	0	26	20	merge_repeat		chromOut	simple
chr11	34543910	A	G	999	11 11 11 11 11 11 11 11	44	0	0	19	25	0	0	30	24	0	0	25	23	0	0	18	27	0	0	29	20	0	0	22	26	0	0	26	25	0	0	26	20	merge_repeat		chromOut	simple
chr11	38587570	T	C	999	11 11 11 11 11 11 11 11	54	0	0	26	38	0	0	36	40	0	0	33	30	0	0	38	37	0	0	33	35	0	0	29	25	0	0	24	30	0	0	22	33
chr11	38587618	T	G	999	11 11 11 11 11 11 11 11	51	0	0	32	40	0	0	33	40	0	0	34	29	0	0	50	26	0	0	31	26	0	0	27	24	0	0	33	20	0	0	43	27
chr11	39151268	A	C	999	11 11 11 11 11 11 11 11	46	0	0	26	38	0	0	38	46	0	0	28	38	0	0	26	33	0	1	24	21	0	0	30	30	0	0	27	36	0	0	31	38	merge_repeat		chromOut		nested
chr11	39785360	T	C	999	11 11 11 11 11 11 11 11	45	0	0	34	24	0	0	30	25	0	0	33	24	0	0	34	33	0	0	21	29	0	0	25	20	0	0	28	24	0	0	29	16	merge_repeat		chromOut		nested
chr11	41212113	T	G	999	11 11 11 11 11 11 11 11	47	0	0	32	44	0	0	35	36	0	0	40	34	0	0	23	24	0	0	32	33	0	0	25	33	0	0	38	36	0	0	36	38	merge_repeat		chromOut
chr11	46554257	G	A	999	11 11 11 11 11 11 11 11	56	0	0	32	26	0	0	27	32	0	0	43	21	0	0	32	38	0	0	32	28	0	0	41	25	0	0	28	28	0	0	29	29
chr11	49296981	T	C	999	11 11 11 11 11 11 11 11	32	0	0	29	25	0	0	31	20	0	0	23	19	0	0	31	20	0	0	37	26	0	0	23	18	0	0	23	15	0	0	19	13	merge_repeat		chromOut		nested
chr11	49716691	C	A	999	11 11 11 11 11 11 11 11	25	0	0	7	18	0	0	25	17	0	0	13	19	0	0	13	28	0	0	22	22	0	0	14	25	0	1	13	24	0	0	13	14	merge_repeat		chromOut
chr11	50024953	T	G	999	11 11 11 11 11 11 11 11	30	0	0	16	27	0	0	17	28	0	0	10	24	0	0	14	40	0	0	11	38	0	0	12	18	0	0	12	25	0	0	15	24
chr11	53017596	A	G	999	11 11 11 11 11 11 11 11	46	0	0	29	23	0	0	26	20	0	0	28	33	0	0	24	36	0	0	29	38	0	0	26	37	0	0	20	32	0	0	32	28	merge_repeat		chromOut		nested
chr11	53017701	A	G	999	11 11 11 11 11 11 11 11	46	0	0	29	23	0	0	25	27	0	0	26	29	0	0	32	30	0	0	34	37	0	0	16	30	0	0	37	30	0	0	35	25	merge_repeat		chromOut		nested
chr11	53017755	T	G	999	11 11 11 11 11 11 11 11	45	0	0	30	18	0	0	26	31	0	0	30	27	0	0	29	24	1	0	31	23	0	0	21	24	0	0	41	23	0	0	40	28
chr11	53296226	A	G	999	11 11 11 11 11 11 11 11	49	0	0	35	35	0	0	47	35	0	0	34	32	0	0	26	23	0	0	38	40	0	0	37	29	0	0	38	25	0	0	42	31	merge_repeat		chromOut
chr11	53979573	T	C	999	11 11 11 11 11 11 11 11	36	0	0	22	21	0	0	17	19	0	0	25	19	0	0	31	29	0	0	30	34	0	0	19	32	0	0	22	16	0	0	22	22
chr11	54234601	T	C	999	11 11 11 11 11 11 11 11	32	0	0	21	11	0	0	21	24	0	0	17	18	0	0	21	26	0	0	21	29	0	0	19	28	0	0	18	22	0	0	20	27	merge_repeat		chromOut		nested
chr11	56653819	A	G	999	11 11 11 11 11 11 11 11	52	0	0	27	25	0	0	28	31	0	0	39	32	0	0	36	36	0	0	38	28	0	0	29	36	0	0	28	31	0	0	35	25
chr11	57145091	A	C	999	11 11 11 11 11 11 11 11	21	0	0	3	19	0	0	6	19	0	0	6	26	0	0	7	19	0	0	8	19	0	0	8	19	0	0	6	19	0	0	9	12
chr11	58782329	T	A	999	11 11 11 11 11 11 11 11	42	0	0	23	37	0	0	29	31	0	0	17	38	0	0	27	39	0	0	31	33	0	0	29	40	0	0	16	32	0	0	18	24	merge_repeat		chromOut
chr11	58782330	G	C	999	11 11 11 11 11 11 11 11	45	0	0	23	39	0	0	29	32	0	0	17	38	0	0	27	41	0	0	31	33	0	0	29	40	0	0	17	35	0	0	18	27	merge_repeat		chromOut
chr11	59005912	A	G	999	11 11 11 11 11 11 11 11	31	0	0	28	15	0	1	31	18	0	0	24	24	1	1	30	14	0	0	34	20	0	0	28	18	1	0	26	22	0	0	15	16	merge_repeat			simple
chr11	59099048	T	C	999	11 11 11 11 11 11 11 11	41	0	0	28	27	0	0	23	18	0	0	18	32	0	0	20	38	0	0	21	23	0	0	27	29	0	0	19	25	0	0	25	30
chr11	59871140	T	A	999	11 11 11 11 11 11 11 11	42	0	0	16	26	0	0	24	22	0	0	24	31	0	0	18	35	0	0	33	31	0	0	15	30	0	0	18	27	0	0	11	41	merge_repeat		chromOut		nested
chr11	64994543	T	C	999	11 11 11 11 11 11 11 11	51	0	0	28	24	0	0	23	28	0	0	24	31	0	0	28	32	0	0	31	34	0	0	30	34	0	0	25	26	0	0	36	25
chr11	65423779	A	G	999	11 11 11 11 11 11 11 11	35	0	0	34	16	0	0	19	16	0	0	24	21	0	0	35	28	0	0	31	26	0	0	36	21	0	0	31	16	0	0	25	19
chr11	67124182	G	T	999	11 11 11 11 11 11 11 11	38	0	0	31	31	0	0	21	25	0	0	29	26	0	0	30	25	0	0	27	42	0	0	27	31	0	0	26	24	0	0	21	17
chr11	71678379	G	T	999	11 11 11 11 11 11 11 11	56	0	0	38	30	0	0	27	29	0	0	42	23	0	0	37	31	0	0	49	38	0	0	40	45	0	0	31	30	0	0	41	37	merge_repeat		chromOut
chr11	72023423	T	G	999	11 11 11 11 11 11 11 11	39	0	0	20	19	0	0	29	29	0	0	28	19	0	0	38	26	0	0	21	28	0	0	35	20	0	0	32	29	0	0	22	22
chr11	73063940	A	C	999	11 11 11 11 11 11 11 11	29	0	0	20	19	1	0	20	22	0	1	24	28	1	0	27	29	0	0	28	25	1	0	30	21	0	0	21	28	1	0	15	13	merge_repeat		chromOut
chr11	74337893	A	C	999	11 11 11 11 11 11 11 11	43	0	0	20	23	0	0	26	26	0	0	29	20	0	0	32	31	0	0	40	34	0	0	27	34	0	0	25	29	0	0	33	25
chr11	78471099	G	T	999	11 11 11 11 11 11 11 11	36	0	0	29	23	0	0	27	18	0	0	21	29	0	0	28	41	0	0	20	27	0	0	20	22	0	0	24	12	0	0	24	20	merge_repeat		chromOut
chr11	79189801	G	A	999	11 11 11 11 11 11 11 11	31	0	0	15	21	0	0	17	20	0	0	17	32	0	0	23	26	0	0	14	27	0	0	15	19	0	0	13	18	0	0	21	12	merge_repeat	trfMask		simple	nested
chr11	80365208	G	T	999	11 11 11 11 11 11 11 11	24	0	0	13	13	0	0	17	19	0	1	17	13	0	0	17	16	0	0	9	18	0	0	18	15	0	0	15	14	0	0	13	11	merge_repeat		chromOut
chr11	80808920	A	C	999	11 11 11 11 11 11 11 11	27	0	0	15	16	0	0	18	9	0	0	20	14	0	0	18	30	0	0	15	17	0	0	16	19	0	0	14	15	0	0	16	22	merge_repeat	trfMask	chromOut	simple
chr11	83666000	A	G	999	11 11 11 11 11 11 11 11	53	0	0	38	40	0	0	33	37	0	0	29	24	0	0	39	30	0	0	37	37	0	0	35	26	0	0	33	33	0	0	34	27
chr11	85866333	A	C	999	11 11 11 11 11 11 11 11	57	0	0	41	35	0	0	34	38	0	0	40	32	0	0	34	31	0	0	35	50	0	0	33	24	1	0	33	42	0	0	41	27
chr11	86010413	T	G	999	11 11 11 11 11 11 11 11	35	0	0	14	21	0	0	19	19	0	0	14	23	0	0	16	21	0	0	16	19	0	0	29	28	0	0	29	28	0	0	19	21	merge_repeat		chromOut	simple
chr11	86151151	C	G	999	11 11 11 11 11 11 11 11	25	0	0	15	13	0	0	17	18	0	0	18	20	0	0	25	27	0	0	20	18	0	0	24	16	0	0	12	13	0	0	16	11	merge_repeat		chromOut		nested
chr11	86739764	G	T	999	11 11 11 11 11 11 11 11	22	0	0	5	26	0	0	6	25	0	0	6	18	0	0	15	23	0	0	10	21	0	0	6	23	0	0	11	23	0	0	9	13	merge_repeat		chromOut
chr11	86824258	C	T	999	11 11 11 11 11 11 11 11	34	0	0	26	19	0	0	17	30	0	0	16	23	0	0	24	18	0	0	21	20	0	0	16	18	0	0	22	26	0	0	21	17	merge_repeat		chromOut
chr11	87617520	G	C	999	11 11 11 11 11 11 11 11	23	0	0	11	13	0	0	5	21	0	0	7	19	0	0	6	30	0	0	10	15	0	0	11	19	0	0	9	14	0	0	7	18
chr11	88234767	T	G	999	11 11 11 11 11 11 11 11	36	0	0	25	16	0	0	20	16	0	0	31	15	0	0	22	25	0	0	34	19	0	0	28	14	0	0	27	12	0	0	19	23	merge_repeat	trfMask	chromOut	simple
chr11	88495943	T	C	999	11 11 11 11 11 11 11 11	53	0	0	38	28	0	0	24	29	0	0	28	35	0	0	29	34	0	0	24	33	0	0	25	43	0	0	24	31	0	0	21	39
chr11	89159902	C	A	999	11 11 11 11 11 11 11 11	20	0	0	15	10	0	0	12	14	0	0	12	18	0	0	17	12	0	0	10	10	0	0	16	6	0	0	13	12	0	0	15	6	merge_repeat		chromOut
chr11	89516630	T	C	999	11 11 11 11 11 11 11 11	49	0	0	33	16	0	0	30	32	0	0	26	27	0	0	39	41	0	0	39	25	0	0	27	37	0	0	33	25	0	0	31	22	merge_repeat		chromOut
chr11	90370035	G	T	999	11 11 11 11 11 11 11 11	35	0	0	18	17	0	0	25	29	0	0	26	27	0	0	21	42	0	0	23	39	0	0	35	26	0	0	28	25	0	0	22	27
chr11	93031439	G	T	999	11 11 11 11 11 11 11 11	40	0	0	22	30	0	0	20	20	0	0	25	36	0	0	28	31	0	0	20	24	0	0	26	29	0	0	26	28	0	0	36	26
chr11	94680310	C	A	999	11 11 11 11 11 11 11 11	48	0	0	22	26	0	0	25	26	0	0	26	29	0	0	33	37	0	1	21	36	0	0	27	37	0	0	27	29	0	0	23	30	merge_repeat		chromOut
chr11	94680350	C	T	999	11 11 11 11 11 11 11 11	52	0	0	29	27	0	0	21	33	0	0	22	30	0	0	29	37	0	0	18	45	0	0	24	39	0	0	21	34	0	0	28	39	merge_repeat		chromOut
chr11	95204618	A	G	999	11 11 11 11 11 11 11 11	40	0	0	37	10	0	0	28	12	0	0	29	22	0	0	22	33	0	0	35	13	0	0	25	15	0	0	24	23	0	0	25	22
chr11	96599273	A	T	999	11 11 11 11 11 11 11 11	51	0	0	34	25	0	0	30	32	0	0	32	32	1	1	24	39	0	0	31	27	0	0	26	25	0	0	24	34	0	0	32	23
chr11	96753657	T	C	999	11 11 11 11 11 11 11 11	20	0	0	13	9	0	0	13	7	0	0	15	12	0	0	21	22	0	0	22	12	0	0	14	8	0	0	17	8	0	0	16	7
chr11	97089416	A	G	999	11 11 11 11 11 11 11 11	49	0	0	29	21	0	0	38	17	0	0	38	23	0	0	31	27	0	0	34	29	0	0	27	27	0	0	36	15	0	0	31	18
chr11	97413758	C	G	999	11 11 11 11 11 11 11 11	20	0	0	13	7	0	0	17	10	0	0	11	13	0	0	14	17	0	0	21	15	0	0	13	12	0	0	13	9	0	0	13	10	merge_repeat	trfMask	chromOut	simple
chr11	97836778	A	G	999	11 11 11 11 11 11 11 11	56	0	0	32	24	0	0	31	29	0	0	33	24	0	0	35	29	0	0	28	35	0	0	27	29	0	0	34	24	0	0	28	29
chr11	97966242	G	A	999	11 11 11 11 11 11 11 11	44	0	0	21	35	0	0	30	29	0	0	31	41	0	0	20	36	0	0	32	37	0	0	24	34	0	0	34	26	0	0	19	25	merge_repeat		chromOut
chr11	101558513	A	G	999	11 11 11 11 11 11 11 11	47	0	0	24	28	0	0	26	21	0	0	25	35	0	0	26	22	0	0	28	30	0	0	23	29	1	0	17	29	0	0	31	28	merge_repeat		chromOut		nested
chr11	103975837	A	G	999	11 11 11 11 11 11 11 11	63	0	0	46	28	1	0	41	27	0	0	28	35	1	0	37	35	0	0	38	44	0	0	36	35	0	0	38	34	0	0	37	40	merge_repeat		chromOut
chr11	103975838	C	A	999	11 11 11 11 11 11 11 11	63	0	0	45	28	1	0	41	27	0	0	28	35	1	0	37	35	0	0	38	44	0	0	36	35	0	0	38	34	0	0	37	40	merge_repeat		chromOut
chr11	105780976	C	T	999	11 11 11 11 11 11 11 11	36	0	0	30	19	0	0	23	20	0	0	34	17	0	0	44	25	0	0	31	27	0	0	25	22	0	0	20	16	0	0	30	20	merge_repeat		chromOut
chr11	106471576	A	C	999	11 11 11 11 11 11 11 11	51	0	0	32	28	0	0	47	34	0	0	26	25	0	0	48	34	0	0	44	31	0	0	33	28	0	0	37	22	0	0	34	23	merge_repeat		chromOut
chr11	107821542	A	C	999	11 11 11 11 11 11 11 11	34	0	0	22	21	0	0	16	18	0	0	15	25	0	0	19	23	0	0	21	20	0	0	23	19	0	0	17	18	0	0	24	18	merge_repeat	trfMask	chromOut	simple
chr11	109533443	C	T	999	11 11 11 11 11 11 11 11	38	0	0	28	11	0	0	30	13	0	0	27	26	0	0	30	28	0	0	30	12	0	0	37	16	0	0	30	18	0	0	27	11
chr11	110681731	A	C	999	11 11 11 11 11 11 11 11	49	0	0	33	41	0	0	27	22	0	0	41	24	0	0	38	43	0	0	32	39	0	0	43	20	0	0	36	30	0	0	27	29
chr11	111544163	G	A	999	11 11 11 11 11 11 11 11	22	0	0	13	12	0	1	13	8	0	0	21	14	0	0	28	23	0	1	17	19	0	0	15	20	0	0	12	14	0	0	15	15	merge_repeat	trfMask	chromOut	simple
chr11	112096524	A	T	999	11 11 11 11 11 11 11 11	20	0	0	8	12	0	0	10	14	0	0	17	24	0	0	15	14	0	0	17	23	0	0	15	26	0	0	8	12	0	0	14	13	merge_repeat		chromOut
chr11	112752227	T	G	999	11 11 11 11 11 11 11 11	42	0	0	35	15	0	0	26	17	0	0	23	21	0	0	32	19	0	0	34	19	0	0	30	22	0	0	26	16	0	0	31	15	merge_repeat		chromOut
chr11	113360130	C	G	999	11 11 11 11 11 11 11 11	23	0	0	8	16	0	0	13	14	0	0	13	18	0	0	17	21	0	0	13	24	0	0	15	19	0	0	15	17	0	0	9	14	merge_repeat		chromOut	simple
chr11	117782180	T	G	999	11 11 11 11 11 11 11 11	33	0	0	15	32	0	0	16	24	0	0	29	28	0	0	33	25	0	0	22	33	0	0	23	21	0	0	14	19	0	0	21	22
chr11	117907932	C	G	999	11 11 11 11 11 11 11 11	26	0	0	12	14	0	0	18	19	0	0	17	13	0	0	20	16	0	0	18	20	0	0	10	20	0	0	17	9	0	1	10	16	merge_repeat	trfMask	chromOut	simple
chr11	118641416	A	G	999	11 11 11 11 11 11 11 11	21	0	0	17	7	0	0	14	11	0	0	19	7	0	0	18	11	0	0	20	23	0	0	17	10	0	0	17	9	0	0	17	4	merge_repeat			simple