chr position ref alt quality samtools_GT_RAW min_depth 1RF 1RR 1AF 1AR 2RF 2RR 2AF 2AR 3RF 3RR 3AF 3AR 4RF 4RR 4AF 4AR 5RF 5RR 5AF 5AR 6RF 6RR 6AF 6AR 7RF 7RR 7AF 7AR 8RF 8RR 8AF 8AR merge_repeat trfMask chromOut simple nested segmentDup
chr11 3832258 G A 999 11 11 11 11 11 11 11 11 38 1 1 23 13 1 1 33 18 0 1 35 23 0 0 31 26 1 0 40 22 0 0 31 23 0 1 35 14 1 1 26 17 merge_repeat trfMask chromOut simple
chr11 4695962 C A 999 11 11 11 11 11 11 11 11 21 0 0 12 19 0 0 10 11 0 0 10 15 0 0 10 18 0 0 11 31 0 0 11 16 0 0 11 13 0 0 8 17 merge_repeat chromOut nested
chr11 7063524 G C 999 11 11 11 11 11 11 11 11 23 0 0 7 16 0 0 12 15 0 0 13 23 0 0 19 34 0 0 12 14 0 0 7 26 0 0 14 15 0 0 13 14 merge_repeat chromOut simple
chr11 7486858 C A 999 11 11 11 11 11 11 11 11 34 0 0 31 24 0 0 23 24 0 0 26 31 0 0 28 29 0 0 29 35 0 0 24 33 0 0 20 21 0 0 16 18 merge_repeat nested
chr11 7556142 A C 999 11 11 11 11 11 11 11 11 40 0 0 21 19 0 0 24 37 0 0 22 19 0 0 32 34 0 0 33 26 0 0 34 24 0 0 33 22 0 0 22 24 merge_repeat trfMask chromOut simple
chr11 8711094 T C 999 11 11 11 11 11 11 11 11 26 0 0 9 25 0 0 16 10 0 0 8 21 0 1 9 29 0 0 16 28 0 0 15 27 0 0 7 28 0 1 11 19 @
chr11 9726978 T C 999 11 11 11 11 11 11 11 11 53 0 0 24 36 0 0 35 34 0 0 24 29 0 0 26 36 0 0 23 31 0 0 29 33 0 0 26 37 0 0 35 38 @
chr11 9834995 G T 999 11 11 11 11 11 11 11 11 48 0 0 40 21 0 0 26 31 0 0 38 43 0 0 32 45 0 0 24 24 0 0 33 35 0 0 31 44 0 0 36 44 merge_repeat chromOut
chr11 10829447 T G 999 11 11 11 11 11 11 11 11 38 0 0 32 18 0 0 28 22 0 0 36 29 0 0 26 17 0 0 26 18 0 0 19 27 0 0 28 27 0 0 16 22 merge_repeat chromOut
chr11 10969093 C T 999 11 11 11 11 11 11 11 11 63 0 0 31 32 0 0 38 34 0 0 43 40 0 0 56 36 0 0 46 40 0 0 49 27 0 0 40 48 0 0 50 51 merge_repeat chromOut nested
chr11 13034350 A G 999 11 11 11 11 11 11 11 11 38 0 0 23 23 0 0 21 32 0 0 24 30 0 0 23 25 0 0 30 27 0 0 22 32 0 0 19 19 0 0 22 28 merge_repeat chromOut
chr11 13044505 A G 999 11 11 11 11 11 11 11 11 46 0 0 27 40 0 0 26 26 0 0 22 45 0 0 26 30 0 0 18 37 0 0 20 29 0 0 28 33 0 0 20 26 merge_repeat chromOut
chr11 13513096 T C 999 11 11 11 11 11 11 11 11 51 0 0 28 27 0 0 37 36 0 0 20 31 0 0 23 35 0 0 40 32 0 0 24 28 0 0 28 40 0 0 29 33 merge_repeat chromOut nested
chr11 14030176 T C 999 11 11 11 11 11 11 11 11 39 0 0 20 31 0 0 30 37 0 0 11 36 0 0 29 32 0 0 26 21 0 0 19 20 0 0 19 25 0 0 19 30 merge_repeat chromOut simple
chr11 16728343 T C 999 11 11 11 11 11 11 11 11 37 0 0 31 25 0 0 17 20 0 0 27 18 0 0 37 30 0 0 27 17 0 0 34 19 0 0 27 35 0 0 20 19 merge_repeat chromOut nested
chr11 17377909 C T 999 11 11 11 11 11 11 11 11 56 0 0 39 35 0 0 34 31 0 0 22 34 0 0 37 34 0 0 31 28 0 0 30 29 0 0 33 39 0 0 21 35 merge_repeat chromOut
chr11 19283395 T C 999 11 11 11 11 11 11 11 11 53 0 0 26 46 0 0 32 21 0 0 28 36 0 0 17 43 0 0 29 24 0 0 26 29 0 0 22 37 0 0 20 36 @
chr11 19732924 G C 999 11 11 11 11 11 11 11 11 37 0 0 23 31 0 0 21 16 0 0 19 23 0 0 30 23 0 0 34 22 0 0 21 26 0 0 23 31 0 0 26 24 merge_repeat chromOut
chr11 20112734 A C 999 11 11 11 11 11 11 11 11 32 0 0 17 17 0 0 18 14 0 0 20 20 0 0 19 21 0 0 18 17 0 0 22 17 0 0 13 22 0 0 19 16 @
chr11 26010068 T C 999 11 11 11 11 11 11 11 11 52 0 0 37 15 0 0 39 21 0 0 24 28 0 0 34 30 0 0 46 24 0 0 37 15 0 0 31 26 0 0 36 17 @
chr11 29032065 A G 999 11 11 11 11 11 11 11 11 22 0 0 10 12 0 0 15 21 0 0 9 19 0 0 15 20 0 0 10 19 0 0 5 17 0 0 16 18 0 0 12 26 merge_repeat chromOut
chr11 29103036 A C 999 11 11 11 11 11 11 11 11 58 0 0 34 27 0 0 35 28 1 0 30 34 0 0 33 28 1 0 45 31 0 0 41 22 0 0 27 33 0 1 35 22 merge_repeat chromOut
chr11 29779482 T A 999 11 11 11 11 11 11 11 11 36 0 0 25 15 0 0 25 19 0 0 20 22 0 0 29 24 0 0 22 23 0 0 23 14 0 0 28 19 0 0 18 18 @
chr11 30155673 T A 999 11 11 11 11 11 11 11 11 32 0 0 12 30 0 0 16 16 0 0 13 32 0 0 19 31 0 0 28 27 0 0 17 38 0 0 11 38 0 0 13 38 @
chr11 32419352 A G 999 11 11 11 11 11 11 11 11 37 0 0 12 26 1 0 22 29 1 0 22 14 1 0 22 24 0 1 24 26 0 0 29 27 0 0 28 26 1 0 16 29 merge_repeat trfMask chromOut simple
chr11 33354090 T G 999 11 11 11 11 11 11 11 11 29 0 0 21 14 0 0 26 13 0 0 20 9 0 0 32 19 0 0 29 13 0 0 23 12 0 0 30 5 0 0 27 11 merge_repeat trfMask chromOut simple
chr11 33548367 A G 999 11 11 11 11 11 11 11 11 51 0 0 31 33 0 0 31 20 0 0 39 29 0 0 45 23 0 0 42 23 0 0 55 27 0 0 31 22 0 0 39 21 @
chr11 34542982 C A 999 11 11 11 11 11 11 11 11 25 0 0 23 9 0 0 15 10 0 0 20 19 0 0 29 16 0 0 23 9 0 0 16 13 0 0 29 11 0 0 20 15 merge_repeat chromOut simple nested
chr11 34543000 C T 999 11 11 11 11 11 11 11 11 20 0 0 19 7 0 0 12 8 0 0 15 14 0 0 20 13 0 0 18 7 0 0 12 15 0 0 27 11 0 0 19 12 merge_repeat chromOut simple nested
chr11 34543006 C A 999 11 11 11 11 11 11 11 11 23 0 0 19 6 0 0 15 8 0 0 15 13 0 0 21 13 0 0 19 7 0 0 11 15 0 0 26 11 0 0 17 12 merge_repeat chromOut simple nested
chr11 34543020 C A 999 11 11 11 11 11 11 11 11 22 0 0 17 7 0 0 14 8 0 0 14 14 0 0 21 15 0 0 18 8 0 0 11 15 0 0 25 10 0 0 17 15 merge_repeat chromOut simple nested
chr11 34543030 C A 999 11 11 11 11 11 11 11 11 25 0 0 18 7 0 0 15 11 0 0 14 16 0 0 18 15 0 0 18 9 0 0 14 17 0 0 23 12 0 0 21 15 merge_repeat chromOut simple nested
chr11 34543081 C G 999 11 11 11 11 11 11 11 11 38 0 0 25 32 0 0 21 24 0 0 18 24 0 0 13 33 0 0 25 18 0 0 17 30 0 0 22 23 0 0 20 18 merge_repeat simple
chr11 34543092 C A 999 11 11 11 11 11 11 11 11 39 0 0 25 33 0 0 23 28 0 0 19 30 0 0 16 32 0 0 27 19 0 0 19 32 0 0 22 24 0 0 20 19 merge_repeat simple
chr11 34543104 C G 999 11 11 11 11 11 11 11 11 45 0 0 25 41 0 0 24 34 0 0 19 36 0 0 19 40 0 0 30 21 0 0 24 34 0 0 25 29 0 0 22 23 merge_repeat simple
chr11 34543125 C A 999 11 11 11 11 11 11 11 11 49 0 0 26 45 0 0 26 36 0 0 20 36 0 0 26 42 0 0 34 27 0 0 27 38 0 0 29 37 0 0 18 31 merge_repeat chromOut simple
chr11 34543235 C A 999 11 11 11 11 11 11 11 11 47 0 0 30 36 0 0 25 26 0 0 22 26 0 0 32 34 0 0 28 31 0 0 28 19 0 0 38 38 0 0 25 35 merge_repeat chromOut simple
chr11 34543245 C A 999 11 11 11 11 11 11 11 11 42 0 0 31 33 0 0 23 19 0 0 26 20 0 0 30 33 0 0 28 29 0 0 27 16 0 0 36 35 0 0 28 33 merge_repeat chromOut simple
chr11 34543270 C A 999 11 11 11 11 11 11 11 11 40 0 0 34 27 0 0 25 21 0 0 31 18 0 0 28 30 0 0 25 24 0 0 26 14 0 0 33 33 0 0 32 26 merge_repeat chromOut simple
chr11 34543294 C A 999 11 11 11 11 11 11 11 11 42 0 0 36 22 0 0 30 19 0 0 30 13 0 0 30 20 0 0 24 18 0 0 31 14 0 0 35 27 0 0 33 22 merge_repeat chromOut simple
chr11 34543322 C G 999 11 11 11 11 11 11 11 11 46 0 0 32 19 0 0 36 19 0 0 31 19 0 0 29 19 0 0 29 20 0 0 36 18 0 0 38 21 0 0 30 16 merge_repeat simple
chr11 34543342 C A 999 11 11 11 11 11 11 11 11 49 0 0 36 16 0 0 35 19 0 0 30 19 0 0 32 17 0 0 28 24 0 0 33 18 0 0 39 17 0 0 30 19 merge_repeat chromOut simple
chr11 34543345 C G 999 11 11 11 11 11 11 11 11 49 0 0 36 16 0 0 35 19 0 0 30 20 0 0 32 18 0 0 28 24 0 0 33 18 0 0 39 19 0 0 30 19 merge_repeat chromOut simple
chr11 34543908 A T 999 11 11 11 11 11 11 11 11 44 0 0 19 25 0 0 30 24 0 0 25 23 0 0 18 27 0 0 29 20 0 0 22 26 0 0 26 25 0 0 26 20 merge_repeat chromOut simple
chr11 34543909 A G 999 11 11 11 11 11 11 11 11 44 0 0 19 25 0 0 30 24 0 0 25 23 0 0 18 27 0 0 29 20 0 0 22 26 0 0 26 25 0 0 26 20 merge_repeat chromOut simple
chr11 34543910 A G 999 11 11 11 11 11 11 11 11 44 0 0 19 25 0 0 30 24 0 0 25 23 0 0 18 27 0 0 29 20 0 0 22 26 0 0 26 25 0 0 26 20 merge_repeat chromOut simple
chr11 38587570 T C 999 11 11 11 11 11 11 11 11 54 0 0 26 38 0 0 36 40 0 0 33 30 0 0 38 37 0 0 33 35 0 0 29 25 0 0 24 30 0 0 22 33 @
chr11 38587618 T G 999 11 11 11 11 11 11 11 11 51 0 0 32 40 0 0 33 40 0 0 34 29 0 0 50 26 0 0 31 26 0 0 27 24 0 0 33 20 0 0 43 27 @
chr11 39151268 A C 999 11 11 11 11 11 11 11 11 46 0 0 26 38 0 0 38 46 0 0 28 38 0 0 26 33 0 1 24 21 0 0 30 30 0 0 27 36 0 0 31 38 merge_repeat chromOut nested
chr11 39785360 T C 999 11 11 11 11 11 11 11 11 45 0 0 34 24 0 0 30 25 0 0 33 24 0 0 34 33 0 0 21 29 0 0 25 20 0 0 28 24 0 0 29 16 merge_repeat chromOut nested
chr11 41212113 T G 999 11 11 11 11 11 11 11 11 47 0 0 32 44 0 0 35 36 0 0 40 34 0 0 23 24 0 0 32 33 0 0 25 33 0 0 38 36 0 0 36 38 merge_repeat chromOut
chr11 46554257 G A 999 11 11 11 11 11 11 11 11 56 0 0 32 26 0 0 27 32 0 0 43 21 0 0 32 38 0 0 32 28 0 0 41 25 0 0 28 28 0 0 29 29 @
chr11 49296981 T C 999 11 11 11 11 11 11 11 11 32 0 0 29 25 0 0 31 20 0 0 23 19 0 0 31 20 0 0 37 26 0 0 23 18 0 0 23 15 0 0 19 13 merge_repeat chromOut nested
chr11 49716691 C A 999 11 11 11 11 11 11 11 11 25 0 0 7 18 0 0 25 17 0 0 13 19 0 0 13 28 0 0 22 22 0 0 14 25 0 1 13 24 0 0 13 14 merge_repeat chromOut
chr11 50024953 T G 999 11 11 11 11 11 11 11 11 30 0 0 16 27 0 0 17 28 0 0 10 24 0 0 14 40 0 0 11 38 0 0 12 18 0 0 12 25 0 0 15 24 @
chr11 53017596 A G 999 11 11 11 11 11 11 11 11 46 0 0 29 23 0 0 26 20 0 0 28 33 0 0 24 36 0 0 29 38 0 0 26 37 0 0 20 32 0 0 32 28 merge_repeat chromOut nested
chr11 53017701 A G 999 11 11 11 11 11 11 11 11 46 0 0 29 23 0 0 25 27 0 0 26 29 0 0 32 30 0 0 34 37 0 0 16 30 0 0 37 30 0 0 35 25 merge_repeat chromOut nested
chr11 53017755 T G 999 11 11 11 11 11 11 11 11 45 0 0 30 18 0 0 26 31 0 0 30 27 0 0 29 24 1 0 31 23 0 0 21 24 0 0 41 23 0 0 40 28 @
chr11 53296226 A G 999 11 11 11 11 11 11 11 11 49 0 0 35 35 0 0 47 35 0 0 34 32 0 0 26 23 0 0 38 40 0 0 37 29 0 0 38 25 0 0 42 31 merge_repeat chromOut
chr11 53979573 T C 999 11 11 11 11 11 11 11 11 36 0 0 22 21 0 0 17 19 0 0 25 19 0 0 31 29 0 0 30 34 0 0 19 32 0 0 22 16 0 0 22 22 @
chr11 54234601 T C 999 11 11 11 11 11 11 11 11 32 0 0 21 11 0 0 21 24 0 0 17 18 0 0 21 26 0 0 21 29 0 0 19 28 0 0 18 22 0 0 20 27 merge_repeat chromOut nested
chr11 56653819 A G 999 11 11 11 11 11 11 11 11 52 0 0 27 25 0 0 28 31 0 0 39 32 0 0 36 36 0 0 38 28 0 0 29 36 0 0 28 31 0 0 35 25 @
chr11 57145091 A C 999 11 11 11 11 11 11 11 11 21 0 0 3 19 0 0 6 19 0 0 6 26 0 0 7 19 0 0 8 19 0 0 8 19 0 0 6 19 0 0 9 12 @
chr11 58782329 T A 999 11 11 11 11 11 11 11 11 42 0 0 23 37 0 0 29 31 0 0 17 38 0 0 27 39 0 0 31 33 0 0 29 40 0 0 16 32 0 0 18 24 merge_repeat chromOut
chr11 58782330 G C 999 11 11 11 11 11 11 11 11 45 0 0 23 39 0 0 29 32 0 0 17 38 0 0 27 41 0 0 31 33 0 0 29 40 0 0 17 35 0 0 18 27 merge_repeat chromOut
chr11 59005912 A G 999 11 11 11 11 11 11 11 11 31 0 0 28 15 0 1 31 18 0 0 24 24 1 1 30 14 0 0 34 20 0 0 28 18 1 0 26 22 0 0 15 16 merge_repeat simple
chr11 59099048 T C 999 11 11 11 11 11 11 11 11 41 0 0 28 27 0 0 23 18 0 0 18 32 0 0 20 38 0 0 21 23 0 0 27 29 0 0 19 25 0 0 25 30 @
chr11 59871140 T A 999 11 11 11 11 11 11 11 11 42 0 0 16 26 0 0 24 22 0 0 24 31 0 0 18 35 0 0 33 31 0 0 15 30 0 0 18 27 0 0 11 41 merge_repeat chromOut nested
chr11 64994543 T C 999 11 11 11 11 11 11 11 11 51 0 0 28 24 0 0 23 28 0 0 24 31 0 0 28 32 0 0 31 34 0 0 30 34 0 0 25 26 0 0 36 25 @
chr11 65423779 A G 999 11 11 11 11 11 11 11 11 35 0 0 34 16 0 0 19 16 0 0 24 21 0 0 35 28 0 0 31 26 0 0 36 21 0 0 31 16 0 0 25 19 @
chr11 67124182 G T 999 11 11 11 11 11 11 11 11 38 0 0 31 31 0 0 21 25 0 0 29 26 0 0 30 25 0 0 27 42 0 0 27 31 0 0 26 24 0 0 21 17 @
chr11 71678379 G T 999 11 11 11 11 11 11 11 11 56 0 0 38 30 0 0 27 29 0 0 42 23 0 0 37 31 0 0 49 38 0 0 40 45 0 0 31 30 0 0 41 37 merge_repeat chromOut
chr11 72023423 T G 999 11 11 11 11 11 11 11 11 39 0 0 20 19 0 0 29 29 0 0 28 19 0 0 38 26 0 0 21 28 0 0 35 20 0 0 32 29 0 0 22 22 @
chr11 73063940 A C 999 11 11 11 11 11 11 11 11 29 0 0 20 19 1 0 20 22 0 1 24 28 1 0 27 29 0 0 28 25 1 0 30 21 0 0 21 28 1 0 15 13 merge_repeat chromOut
chr11 74337893 A C 999 11 11 11 11 11 11 11 11 43 0 0 20 23 0 0 26 26 0 0 29 20 0 0 32 31 0 0 40 34 0 0 27 34 0 0 25 29 0 0 33 25 @
chr11 78471099 G T 999 11 11 11 11 11 11 11 11 36 0 0 29 23 0 0 27 18 0 0 21 29 0 0 28 41 0 0 20 27 0 0 20 22 0 0 24 12 0 0 24 20 merge_repeat chromOut
chr11 79189801 G A 999 11 11 11 11 11 11 11 11 31 0 0 15 21 0 0 17 20 0 0 17 32 0 0 23 26 0 0 14 27 0 0 15 19 0 0 13 18 0 0 21 12 merge_repeat trfMask simple nested
chr11 80365208 G T 999 11 11 11 11 11 11 11 11 24 0 0 13 13 0 0 17 19 0 1 17 13 0 0 17 16 0 0 9 18 0 0 18 15 0 0 15 14 0 0 13 11 merge_repeat chromOut
chr11 80808920 A C 999 11 11 11 11 11 11 11 11 27 0 0 15 16 0 0 18 9 0 0 20 14 0 0 18 30 0 0 15 17 0 0 16 19 0 0 14 15 0 0 16 22 merge_repeat trfMask chromOut simple
chr11 83666000 A G 999 11 11 11 11 11 11 11 11 53 0 0 38 40 0 0 33 37 0 0 29 24 0 0 39 30 0 0 37 37 0 0 35 26 0 0 33 33 0 0 34 27 @
chr11 85866333 A C 999 11 11 11 11 11 11 11 11 57 0 0 41 35 0 0 34 38 0 0 40 32 0 0 34 31 0 0 35 50 0 0 33 24 1 0 33 42 0 0 41 27 @
chr11 86010413 T G 999 11 11 11 11 11 11 11 11 35 0 0 14 21 0 0 19 19 0 0 14 23 0 0 16 21 0 0 16 19 0 0 29 28 0 0 29 28 0 0 19 21 merge_repeat chromOut simple
chr11 86151151 C G 999 11 11 11 11 11 11 11 11 25 0 0 15 13 0 0 17 18 0 0 18 20 0 0 25 27 0 0 20 18 0 0 24 16 0 0 12 13 0 0 16 11 merge_repeat chromOut nested
chr11 86739764 G T 999 11 11 11 11 11 11 11 11 22 0 0 5 26 0 0 6 25 0 0 6 18 0 0 15 23 0 0 10 21 0 0 6 23 0 0 11 23 0 0 9 13 merge_repeat chromOut
chr11 86824258 C T 999 11 11 11 11 11 11 11 11 34 0 0 26 19 0 0 17 30 0 0 16 23 0 0 24 18 0 0 21 20 0 0 16 18 0 0 22 26 0 0 21 17 merge_repeat chromOut
chr11 87617520 G C 999 11 11 11 11 11 11 11 11 23 0 0 11 13 0 0 5 21 0 0 7 19 0 0 6 30 0 0 10 15 0 0 11 19 0 0 9 14 0 0 7 18 @
chr11 88234767 T G 999 11 11 11 11 11 11 11 11 36 0 0 25 16 0 0 20 16 0 0 31 15 0 0 22 25 0 0 34 19 0 0 28 14 0 0 27 12 0 0 19 23 merge_repeat trfMask chromOut simple
chr11 88495943 T C 999 11 11 11 11 11 11 11 11 53 0 0 38 28 0 0 24 29 0 0 28 35 0 0 29 34 0 0 24 33 0 0 25 43 0 0 24 31 0 0 21 39 @
chr11 89159902 C A 999 11 11 11 11 11 11 11 11 20 0 0 15 10 0 0 12 14 0 0 12 18 0 0 17 12 0 0 10 10 0 0 16 6 0 0 13 12 0 0 15 6 merge_repeat chromOut
chr11 89516630 T C 999 11 11 11 11 11 11 11 11 49 0 0 33 16 0 0 30 32 0 0 26 27 0 0 39 41 0 0 39 25 0 0 27 37 0 0 33 25 0 0 31 22 merge_repeat chromOut
chr11 90370035 G T 999 11 11 11 11 11 11 11 11 35 0 0 18 17 0 0 25 29 0 0 26 27 0 0 21 42 0 0 23 39 0 0 35 26 0 0 28 25 0 0 22 27 @
chr11 93031439 G T 999 11 11 11 11 11 11 11 11 40 0 0 22 30 0 0 20 20 0 0 25 36 0 0 28 31 0 0 20 24 0 0 26 29 0 0 26 28 0 0 36 26 @
chr11 94680310 C A 999 11 11 11 11 11 11 11 11 48 0 0 22 26 0 0 25 26 0 0 26 29 0 0 33 37 0 1 21 36 0 0 27 37 0 0 27 29 0 0 23 30 merge_repeat chromOut
chr11 94680350 C T 999 11 11 11 11 11 11 11 11 52 0 0 29 27 0 0 21 33 0 0 22 30 0 0 29 37 0 0 18 45 0 0 24 39 0 0 21 34 0 0 28 39 merge_repeat chromOut
chr11 95204618 A G 999 11 11 11 11 11 11 11 11 40 0 0 37 10 0 0 28 12 0 0 29 22 0 0 22 33 0 0 35 13 0 0 25 15 0 0 24 23 0 0 25 22 @
chr11 96599273 A T 999 11 11 11 11 11 11 11 11 51 0 0 34 25 0 0 30 32 0 0 32 32 1 1 24 39 0 0 31 27 0 0 26 25 0 0 24 34 0 0 32 23 @
chr11 96753657 T C 999 11 11 11 11 11 11 11 11 20 0 0 13 9 0 0 13 7 0 0 15 12 0 0 21 22 0 0 22 12 0 0 14 8 0 0 17 8 0 0 16 7 @
chr11 97089416 A G 999 11 11 11 11 11 11 11 11 49 0 0 29 21 0 0 38 17 0 0 38 23 0 0 31 27 0 0 34 29 0 0 27 27 0 0 36 15 0 0 31 18 @
chr11 97413758 C G 999 11 11 11 11 11 11 11 11 20 0 0 13 7 0 0 17 10 0 0 11 13 0 0 14 17 0 0 21 15 0 0 13 12 0 0 13 9 0 0 13 10 merge_repeat trfMask chromOut simple
chr11 97836778 A G 999 11 11 11 11 11 11 11 11 56 0 0 32 24 0 0 31 29 0 0 33 24 0 0 35 29 0 0 28 35 0 0 27 29 0 0 34 24 0 0 28 29 @
chr11 97966242 G A 999 11 11 11 11 11 11 11 11 44 0 0 21 35 0 0 30 29 0 0 31 41 0 0 20 36 0 0 32 37 0 0 24 34 0 0 34 26 0 0 19 25 merge_repeat chromOut
chr11 101558513 A G 999 11 11 11 11 11 11 11 11 47 0 0 24 28 0 0 26 21 0 0 25 35 0 0 26 22 0 0 28 30 0 0 23 29 1 0 17 29 0 0 31 28 merge_repeat chromOut nested
chr11 103975837 A G 999 11 11 11 11 11 11 11 11 63 0 0 46 28 1 0 41 27 0 0 28 35 1 0 37 35 0 0 38 44 0 0 36 35 0 0 38 34 0 0 37 40 merge_repeat chromOut
chr11 103975838 C A 999 11 11 11 11 11 11 11 11 63 0 0 45 28 1 0 41 27 0 0 28 35 1 0 37 35 0 0 38 44 0 0 36 35 0 0 38 34 0 0 37 40 merge_repeat chromOut
chr11 105780976 C T 999 11 11 11 11 11 11 11 11 36 0 0 30 19 0 0 23 20 0 0 34 17 0 0 44 25 0 0 31 27 0 0 25 22 0 0 20 16 0 0 30 20 merge_repeat chromOut
chr11 106471576 A C 999 11 11 11 11 11 11 11 11 51 0 0 32 28 0 0 47 34 0 0 26 25 0 0 48 34 0 0 44 31 0 0 33 28 0 0 37 22 0 0 34 23 merge_repeat chromOut
chr11 107821542 A C 999 11 11 11 11 11 11 11 11 34 0 0 22 21 0 0 16 18 0 0 15 25 0 0 19 23 0 0 21 20 0 0 23 19 0 0 17 18 0 0 24 18 merge_repeat trfMask chromOut simple
chr11 109533443 C T 999 11 11 11 11 11 11 11 11 38 0 0 28 11 0 0 30 13 0 0 27 26 0 0 30 28 0 0 30 12 0 0 37 16 0 0 30 18 0 0 27 11 @
chr11 110681731 A C 999 11 11 11 11 11 11 11 11 49 0 0 33 41 0 0 27 22 0 0 41 24 0 0 38 43 0 0 32 39 0 0 43 20 0 0 36 30 0 0 27 29 @
chr11 111544163 G A 999 11 11 11 11 11 11 11 11 22 0 0 13 12 0 1 13 8 0 0 21 14 0 0 28 23 0 1 17 19 0 0 15 20 0 0 12 14 0 0 15 15 merge_repeat trfMask chromOut simple
chr11 112096524 A T 999 11 11 11 11 11 11 11 11 20 0 0 8 12 0 0 10 14 0 0 17 24 0 0 15 14 0 0 17 23 0 0 15 26 0 0 8 12 0 0 14 13 merge_repeat chromOut
chr11 112752227 T G 999 11 11 11 11 11 11 11 11 42 0 0 35 15 0 0 26 17 0 0 23 21 0 0 32 19 0 0 34 19 0 0 30 22 0 0 26 16 0 0 31 15 merge_repeat chromOut
chr11 113360130 C G 999 11 11 11 11 11 11 11 11 23 0 0 8 16 0 0 13 14 0 0 13 18 0 0 17 21 0 0 13 24 0 0 15 19 0 0 15 17 0 0 9 14 merge_repeat chromOut simple
chr11 117782180 T G 999 11 11 11 11 11 11 11 11 33 0 0 15 32 0 0 16 24 0 0 29 28 0 0 33 25 0 0 22 33 0 0 23 21 0 0 14 19 0 0 21 22 @
chr11 117907932 C G 999 11 11 11 11 11 11 11 11 26 0 0 12 14 0 0 18 19 0 0 17 13 0 0 20 16 0 0 18 20 0 0 10 20 0 0 17 9 0 1 10 16 merge_repeat trfMask chromOut simple
chr11 118641416 A G 999 11 11 11 11 11 11 11 11 21 0 0 17 7 0 0 14 11 0 0 19 7 0 0 18 11 0 0 20 23 0 0 17 10 0 0 17 9 0 0 17 4 merge_repeat simple